RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 PNPLA6Q8IY17 1366 aa8.3□□□□□ -1.08
SMAD3-209ENST00000558894 ABCC11Q96J66 1382 aa8.3□□□□□ -1.08
SMAD3-209ENST00000558894 PLEKHH1Q9ULM0 1364 aa8.3□□□□□ -1.08
SMAD3-209ENST00000558894 PXDNQ92626 1479 aa8.3□□□□□ -1.08
SMAD3-209ENST00000558894 ADGRB1O14514 1584 aa8.3□□□□□ -1.08
SMAD3-209ENST00000558894 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-209ENST00000558894 USP32Q8NFA0 1604 aa8.29□□□□□ -1.08
SMAD3-209ENST00000558894 RGL3Q3MIN7 710 aa8.29□□□□□ -1.08
SMAD3-209ENST00000558894 YTHDC2Q9H6S0 1430 aaKnown RBP8.29□□□□□ -1.08
SMAD3-209ENST00000558894 TMEM132EQ6IEE7 984 aa8.28□□□□□ -1.08
SMAD3-209ENST00000558894 WAPLQ7Z5K2 1190 aa8.28□□□□□ -1.08
SMAD3-209ENST00000558894 C14orf93Q9H972 538 aaKnown RBP8.28□□□□□ -1.08
SMAD3-209ENST00000558894 ACIN1Q9UKV3 1341 aaKnown RBP8.28□□□□□ -1.08
SMAD3-209ENST00000558894 KIF1AQ12756 1690 aa8.27□□□□□ -1.08
SMAD3-209ENST00000558894 LRRC59Q96AG4 307 aaKnown RBP8.27□□□□□ -1.09
SMAD3-209ENST00000558894 ADGRB2O60241 1585 aa8.27□□□□□ -1.09
SMAD3-209ENST00000558894 ABCA3Q99758 1704 aa8.26□□□□□ -1.09
SMAD3-209ENST00000558894 DLC1Q96QB1 1528 aa8.26□□□□□ -1.09
SMAD3-209ENST00000558894 SIRT1Q96EB6 747 aa8.26□□□□□ -1.09
SMAD3-209ENST00000558894 ARHGEF28Q8N1W1 1705 aaKnown RBP8.26□□□□□ -1.09
SMAD3-209ENST00000558894 HRCP23327 699 aa8.25□□□□□ -1.09
SMAD3-209ENST00000558894 CFAP70Q5T0N1 1121 aa8.25□□□□□ -1.09
SMAD3-209ENST00000558894 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.25□□□□□ -1.09
SMAD3-209ENST00000558894 CDK12Q9NYV4 1490 aaPredicted RBP8.25□□□□□ -1.09
SMAD3-209ENST00000558894 DHX57Q6P158 1386 aaKnown RBP8.24□□□□□ -1.09
SMAD3-209ENST00000558894 TRPM3Q9HCF6 1732 aaPredicted RBP8.24□□□□□ -1.09
SMAD3-209ENST00000558894 CRYBG1Q9Y4K1 1723 aa8.24□□□□□ -1.09
SMAD3-209ENST00000558894 NUTM2BA6NNL0 878 aaPredicted RBP8.24□□□□□ -1.09
SMAD3-209ENST00000558894 NUTM2EB1AL46 878 aaPredicted RBP8.24□□□□□ -1.09
SMAD3-209ENST00000558894 ZNF772Q68DY9 489 aaPredicted RBP8.24□□□□□ -1.09
SMAD3-209ENST00000558894 NUTM2AQ8IVF1 878 aaPredicted RBP8.24□□□□□ -1.09
SMAD3-209ENST00000558894 STK26Q9P289 416 aa8.24□□□□□ -1.09
SMAD3-209ENST00000558894 AFF2P51816 1311 aa8.24□□□□□ -1.09
SMAD3-209ENST00000558894 KIAA1210Q9ULL0 1709 aa8.23□□□□□ -1.09
SMAD3-209ENST00000558894 RGS12O14924 1447 aa8.22□□□□□ -1.09
SMAD3-209ENST00000558894 ALS2Q96Q42 1657 aa8.22□□□□□ -1.09
SMAD3-209ENST00000558894 ESCO1Q5FWF5 840 aa8.22□□□□□ -1.09
SMAD3-209ENST00000558894 MEX3CQ5U5Q3 659 aaKnown RBP8.22□□□□□ -1.09
SMAD3-209ENST00000558894 PLCH1Q4KWH8 1693 aa8.21□□□□□ -1.09
SMAD3-209ENST00000558894 BCL9LQ86UU0 1499 aa8.21□□□□□ -1.09
SMAD3-209ENST00000558894 FOXO3O43524 673 aa8.21□□□□□ -1.1
SMAD3-209ENST00000558894 FNBP4Q8N3X1 1017 aaPredicted RBP8.21□□□□□ -1.1
SMAD3-209ENST00000558894 BRWD3Q6RI45 1802 aa8.21□□□□□ -1.1
SMAD3-209ENST00000558894 TOPAZ1Q8N9V7 1692 aa8.21□□□□□ -1.1
SMAD3-209ENST00000558894 NUTM2FA1L443 756 aa8.2□□□□□ -1.1
SMAD3-209ENST00000558894 RXRBP28702 533 aa8.2□□□□□ -1.1
SMAD3-209ENST00000558894 XPCQ01831 940 aaPredicted RBP8.2□□□□□ -1.1
SMAD3-209ENST00000558894 C8orf37Q96NL8 207 aa8.2□□□□□ -1.1
SMAD3-209ENST00000558894 PRAM1Q96QH2 718 aa8.2□□□□□ -1.1
SMAD3-209ENST00000558894 NPHP3Q7Z494 1330 aa8.2□□□□□ -1.1
SMAD3-209ENST00000558894 ITSN1Q15811 1721 aa8.2□□□□□ -1.1
SMAD3-209ENST00000558894 NWD2Q9ULI1 1742 aa8.2□□□□□ -1.1
SMAD3-209ENST00000558894 ATRNO75882 1429 aa8.2□□□□□ -1.1
SMAD3-209ENST00000558894 GLI3P10071 1580 aa8.19□□□□□ -1.1
SMAD3-209ENST00000558894 ADAMTS2O95450 1211 aa8.19□□□□□ -1.1
SMAD3-209ENST00000558894 UPF1Q92900 1129 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMAD3-209ENST00000558894 NRAPQ86VF7 1730 aa8.19□□□□□ -1.1
SMAD3-209ENST00000558894 SPATA31A3Q5VYP0 1347 aa8.19□□□□□ -1.1
SMAD3-209ENST00000558894 EP400Q96L91 3159 aa8.19□□□□□ -1.1
SMAD3-209ENST00000558894 ANKARQ7Z5J8 1434 aa8.19□□□□□ -1.1
SMAD3-209ENST00000558894 SLIT2O94813 1529 aa8.19□□□□□ -1.1
SMAD3-209ENST00000558894 RBM6P78332 1123 aaKnown RBP8.18□□□□□ -1.1
SMAD3-209ENST00000558894 DCAF11Q8TEB1 546 aa8.18□□□□□ -1.1
SMAD3-209ENST00000558894 QTRT2Q9H974 415 aaKnown RBP8.18□□□□□ -1.1
SMAD3-209ENST00000558894 PRR36Q9H6K5 1346 aa8.18□□□□□ -1.1
SMAD3-209ENST00000558894 TULP4Q9NRJ4 1543 aa8.18□□□□□ -1.1
SMAD3-209ENST00000558894 KRT28Q7Z3Y7 464 aa8.17□□□□□ -1.1
SMAD3-209ENST00000558894 NGLY1Q96IV0 654 aa8.17□□□□□ -1.1
SMAD3-209ENST00000558894 PHF8Q9UPP1 1060 aa8.17□□□□□ -1.1
SMAD3-209ENST00000558894 TNS3Q68CZ2 1445 aa8.17□□□□□ -1.1
SMAD3-209ENST00000558894 SBNO1A3KN83 1393 aa8.16□□□□□ -1.1
SMAD3-209ENST00000558894 ATP7BP35670 1465 aa8.16□□□□□ -1.1
SMAD3-209ENST00000558894 SAFB2Q14151 953 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMAD3-209ENST00000558894 STAC3Q96MF2 364 aa8.16□□□□□ -1.1
SMAD3-209ENST00000558894 PHRF1Q9P1Y6 1649 aaKnown RBP8.16□□□□□ -1.1
SMAD3-209ENST00000558894 USP21Q9UK80 565 aa8.16□□□□□ -1.1
SMAD3-209ENST00000558894 TRAK1Q9UPV9 953 aa8.16□□□□□ -1.1
SMAD3-209ENST00000558894 KDM2AQ9Y2K7 1162 aa8.16□□□□□ -1.1
SMAD3-209ENST00000558894 TRPM1Q7Z4N2 1603 aa8.15□□□□□ -1.1
SMAD3-209ENST00000558894 QRICH2Q9H0J4 1663 aa8.14□□□□□ -1.11
SMAD3-209ENST00000558894 WASLO00401 505 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-209ENST00000558894 CABLES1Q8TDN4 633 aa8.14□□□□□ -1.11
SMAD3-209ENST00000558894 HIRIP3Q9BW71 556 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-209ENST00000558894 TRPC5Q9UL62 973 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-209ENST00000558894 COL14A1Q05707 1796 aaKnown RBP8.14□□□□□ -1.11
SMAD3-209ENST00000558894 RALGAPBQ86X10 1494 aa8.13□□□□□ -1.11
SMAD3-209ENST00000558894 MINK1Q8N4C8 1332 aaPredicted RBP8.13□□□□□ -1.11
SMAD3-209ENST00000558894 NBPF1Q3BBV0 1214 aa8.13□□□□□ -1.11
SMAD3-209ENST00000558894 PMFBP1Q8TBY8 1022 aa8.13□□□□□ -1.11
SMAD3-209ENST00000558894 POGKQ9P215 609 aa8.13□□□□□ -1.11
SMAD3-209ENST00000558894 GJD4Q96KN9 370 aaPredicted RBP8.12□□□□□ -1.11
SMAD3-209ENST00000558894 PSME1Q06323 249 aa8.11□□□□□ -1.11
SMAD3-209ENST00000558894 UNC5CLQ8IV45 518 aa8.11□□□□□ -1.11
SMAD3-209ENST00000558894 POLR3AO14802 1390 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-209ENST00000558894 ARHGEF10O15013 1369 aa8.1□□□□□ -1.11
SMAD3-209ENST00000558894 EIF3AQ14152 1382 aaKnown RBP8.1□□□□□ -1.11
SMAD3-209ENST00000558894 FAM83GA6ND36 823 aa8.1□□□□□ -1.11
SMAD3-209ENST00000558894 ONECUT3O60422 494 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-209ENST00000558894 NUDT16Q96DE0 195 aaKnown RBP8.1□□□□□ -1.11
SMAD3-209ENST00000558894 LMO7Q8WWI1 1683 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms