RNA–Protein interactions for RNA: ENST00000558837.5

PBX1-214, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-214ENST00000558837 SIN3AQ96ST3 1273 aa32.53■■■□□ 2.8
PBX1-214ENST00000558837 DISP3Q9P2K9 1392 aa32.53■■■□□ 2.8
PBX1-214ENST00000558837 MED1Q15648 1581 aaPredicted RBP32.53■■■□□ 2.8
PBX1-214ENST00000558837 NHSL1Q5SYE7 1610 aa32.5■■■□□ 2.79
PBX1-214ENST00000558837 NEUROD1Q13562 356 aa32.48■■■□□ 2.79
PBX1-214ENST00000558837 L3MBTL2Q969R5 705 aa32.48■■■□□ 2.79
PBX1-214ENST00000558837 PRAM1Q96QH2 718 aa32.48■■■□□ 2.79
PBX1-214ENST00000558837 POGKQ9P215 609 aa32.46■■■□□ 2.79
PBX1-214ENST00000558837 JCADQ9P266 1359 aa32.45■■■□□ 2.79
PBX1-214ENST00000558837 TRAK1Q9UPV9 953 aa32.45■■■□□ 2.79
PBX1-214ENST00000558837 FMN2Q9NZ56 1722 aa32.45■■■□□ 2.78
PBX1-214ENST00000558837 ADGRB2O60241 1585 aa32.41■■■□□ 2.78
PBX1-214ENST00000558837 ARHGEF28Q8N1W1 1705 aaKnown RBP32.41■■■□□ 2.78
PBX1-214ENST00000558837 SHPRHQ149N8 1683 aa32.38■■■□□ 2.77
PBX1-214ENST00000558837 SAFB2Q14151 953 aaKnown RBP eCLIP32.38■■■□□ 2.77
PBX1-214ENST00000558837 ORAI2Q96SN7 254 aa32.38■■■□□ 2.77
PBX1-214ENST00000558837 ESCO1Q5FWF5 840 aa32.35■■■□□ 2.77
PBX1-214ENST00000558837 LRRC59Q96AG4 307 aaKnown RBP32.33■■■□□ 2.77
PBX1-214ENST00000558837 SPATA31A6Q5VVP1 1343 aa32.32■■■□□ 2.76
PBX1-214ENST00000558837 KIF1AQ12756 1690 aa32.32■■■□□ 2.76
PBX1-214ENST00000558837 NBPF1Q3BBV0 1214 aa32.32■■■□□ 2.76
PBX1-214ENST00000558837 TRPM1Q7Z4N2 1603 aa32.32■■■□□ 2.76
PBX1-214ENST00000558837 TONSLQ96HA7 1378 aa32.32■■■□□ 2.76
PBX1-214ENST00000558837 EIF3AQ14152 1382 aaKnown RBP32.31■■■□□ 2.76
PBX1-214ENST00000558837 NUTM2FA1L443 756 aa32.3■■■□□ 2.76
PBX1-214ENST00000558837 PHF23Q9BUL5 403 aaPredicted RBP32.3■■■□□ 2.76
PBX1-214ENST00000558837 PCGF6Q9BYE7 350 aa32.3■■■□□ 2.76
PBX1-214ENST00000558837 NPHP3Q7Z494 1330 aa32.29■■■□□ 2.76
PBX1-214ENST00000558837 ANKARQ7Z5J8 1434 aa32.29■■■□□ 2.76
PBX1-214ENST00000558837 DDX17Q92841 729 aaKnown RBP32.29■■■□□ 2.76
PBX1-214ENST00000558837 SOS2Q07890 1332 aaPredicted RBP32.28■■■□□ 2.76
PBX1-214ENST00000558837 MINK1Q8N4C8 1332 aaPredicted RBP32.28■■■□□ 2.76
PBX1-214ENST00000558837 RGPD8O14715 1765 aaPredicted RBP32.25■■■□□ 2.75
PBX1-214ENST00000558837 HIRIP3Q9BW71 556 aaPredicted RBP32.25■■■□□ 2.75
PBX1-214ENST00000558837 TULP4Q9NRJ4 1543 aa32.23■■■□□ 2.75
PBX1-214ENST00000558837 USP32Q8NFA0 1604 aa32.22■■■□□ 2.75
PBX1-214ENST00000558837 ROCK2O75116 1388 aaKnown RBP32.22■■■□□ 2.75
PBX1-214ENST00000558837 WASLO00401 505 aaPredicted RBP32.22■■■□□ 2.75
PBX1-214ENST00000558837 PXDNQ92626 1479 aa32.22■■■□□ 2.75
PBX1-214ENST00000558837 PNPLA6Q8IY17 1366 aa32.21■■■□□ 2.75
PBX1-214ENST00000558837 FOXO3O43524 673 aa32.2■■■□□ 2.75
PBX1-214ENST00000558837 PHF8Q9UPP1 1060 aa32.19■■■□□ 2.74
PBX1-214ENST00000558837 CLSPNQ9HAW4 1339 aa32.18■■■□□ 2.74
PBX1-214ENST00000558837 CENPJQ9HC77 1338 aaPredicted RBP32.18■■■□□ 2.74
PBX1-214ENST00000558837 LRP6O75581 1613 aa32.18■■■□□ 2.74
PBX1-214ENST00000558837 NBPF8Q3BBV2 869 aa32.16■■■□□ 2.74
PBX1-214ENST00000558837 GPRASP1Q5JY77 1395 aa32.16■■■□□ 2.74
PBX1-214ENST00000558837 ITSN1Q15811 1721 aa32.14■■■□□ 2.74
PBX1-214ENST00000558837 QRICH2Q9H0J4 1663 aa32.14■■■□□ 2.74
PBX1-214ENST00000558837 COL22A1Q8NFW1 1626 aaPredicted RBP32.13■■■□□ 2.73
PBX1-214ENST00000558837 RALGAPBQ86X10 1494 aa32.12■■■□□ 2.73
PBX1-214ENST00000558837 MEX3CQ5U5Q3 659 aaKnown RBP32.12■■■□□ 2.73
PBX1-214ENST00000558837 ILDR2Q71H61 639 aa32.12■■■□□ 2.73
PBX1-214ENST00000558837 PRR36Q9H6K5 1346 aa32.11■■■□□ 2.73
PBX1-214ENST00000558837 ATP7BP35670 1465 aa32.1■■■□□ 2.73
PBX1-214ENST00000558837 XPCQ01831 940 aaPredicted RBP32.1■■■□□ 2.73
PBX1-214ENST00000558837 NUTM2BA6NNL0 878 aaPredicted RBP32.09■■■□□ 2.73
PBX1-214ENST00000558837 NUTM2EB1AL46 878 aaPredicted RBP32.09■■■□□ 2.73
PBX1-214ENST00000558837 PSME1Q06323 249 aa32.09■■■□□ 2.73
PBX1-214ENST00000558837 NUTM2AQ8IVF1 878 aaPredicted RBP32.09■■■□□ 2.73
PBX1-214ENST00000558837 CDK19Q9BWU1 502 aa32.09■■■□□ 2.73
PBX1-214ENST00000558837 KRT28Q7Z3Y7 464 aa32.08■■■□□ 2.73
PBX1-214ENST00000558837 PMFBP1Q8TBY8 1022 aa32.06■■■□□ 2.72
PBX1-214ENST00000558837 NUDT16Q96DE0 195 aaKnown RBP32.06■■■□□ 2.72
PBX1-214ENST00000558837 RGS17Q9UGC6 210 aaPredicted RBP32.06■■■□□ 2.72
PBX1-214ENST00000558837 SBNO1A3KN83 1393 aa32.05■■■□□ 2.72
PBX1-214ENST00000558837 SPATA31A3Q5VYP0 1347 aa32.04■■■□□ 2.72
PBX1-214ENST00000558837 TOPAZ1Q8N9V7 1692 aa32.04■■■□□ 2.72
PBX1-214ENST00000558837 TNS3Q68CZ2 1445 aa32.03■■■□□ 2.72
PBX1-214ENST00000558837 CARD11Q9BXL7 1154 aa32.03■■■□□ 2.72
PBX1-214ENST00000558837 TIMELESSQ9UNS1 1208 aa32.03■■■□□ 2.72
PBX1-214ENST00000558837 NGDNQ8NEJ9 315 aaKnown RBP31.99■■■□□ 2.71
PBX1-214ENST00000558837 CCDC61Q9Y6R9 512 aa31.99■■■□□ 2.71
PBX1-214ENST00000558837 SRPK2P78362 688 aaKnown RBP31.98■■■□□ 2.71
PBX1-214ENST00000558837 TRPM3Q9HCF6 1732 aaPredicted RBP31.97■■■□□ 2.71
PBX1-214ENST00000558837 ARHGEF10O15013 1369 aa31.97■■■□□ 2.71
PBX1-214ENST00000558837 ZNF772Q68DY9 489 aaPredicted RBP31.97■■■□□ 2.71
PBX1-214ENST00000558837 EVC2Q86UK5 1308 aa31.97■■■□□ 2.71
PBX1-214ENST00000558837 SBNO2Q9Y2G9 1366 aa31.95■■■□□ 2.71
PBX1-214ENST00000558837 CCER1Q8TC90 406 aaPredicted RBP31.94■■■□□ 2.7
PBX1-214ENST00000558837 PLEKHG3A1L390 1219 aa31.93■■■□□ 2.7
PBX1-214ENST00000558837 POLR3AO14802 1390 aaPredicted RBP31.93■■■□□ 2.7
PBX1-214ENST00000558837 ADAMTS2O95450 1211 aa31.92■■■□□ 2.7
PBX1-214ENST00000558837 POTEAQ6S8J7 498 aa31.92■■■□□ 2.7
PBX1-214ENST00000558837 C8orf37Q96NL8 207 aa31.92■■■□□ 2.7
PBX1-214ENST00000558837 MARF1Q9Y4F3 1742 aaKnown RBP31.92■■■□□ 2.7
PBX1-214ENST00000558837 CABP2Q9NPB3 220 aa31.91■■■□□ 2.7
PBX1-214ENST00000558837 ALS2Q96Q42 1657 aa31.91■■■□□ 2.7
PBX1-214ENST00000558837 AFF2P51816 1311 aa31.9■■■□□ 2.7
PBX1-214ENST00000558837 PPIP5K1Q6PFW1 1433 aa31.9■■■□□ 2.7
PBX1-214ENST00000558837 LMOD2Q6P5Q4 547 aa31.88■■■□□ 2.69
PBX1-214ENST00000558837 ACEP12821 1306 aa31.87■■■□□ 2.69
PBX1-214ENST00000558837 NGLY1Q96IV0 654 aa31.87■■■□□ 2.69
PBX1-214ENST00000558837 SOCS7O14512 581 aa31.86■■■□□ 2.69
PBX1-214ENST00000558837 ABCA3Q99758 1704 aa31.85■■■□□ 2.69
PBX1-214ENST00000558837 ATAD2Q6PL18 1390 aa31.82■■■□□ 2.69
PBX1-214ENST00000558837 PAK3O75914 559 aaPredicted RBP31.82■■■□□ 2.68
PBX1-214ENST00000558837 HAP1P54257 671 aaPredicted RBP31.82■■■□□ 2.68
PBX1-214ENST00000558837 BRD4O60885 1362 aaPredicted RBP31.81■■■□□ 2.68
PBX1-214ENST00000558837 FNBP4Q8N3X1 1017 aaPredicted RBP31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms