RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.04
SPG11-212ENST00000558790 SLIT1O75093 1534 aa15.32■□□□□ 0.04
SPG11-212ENST00000558790 KDM5AP29375 1690 aaKnown RBP15.32■□□□□ 0.04
SPG11-212ENST00000558790 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
SPG11-212ENST00000558790 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
SPG11-212ENST00000558790 ARHGAP23Q9P227 1491 aa15.31■□□□□ 0.04
SPG11-212ENST00000558790 ERBINQ96RT1 1412 aa15.3■□□□□ 0.04
SPG11-212ENST00000558790 PHF8Q9UPP1 1060 aa15.3■□□□□ 0.04
SPG11-212ENST00000558790 KIF15Q9NS87 1388 aa15.29■□□□□ 0.04
SPG11-212ENST00000558790 TRIM52Q96A61 297 aa15.29■□□□□ 0.04
SPG11-212ENST00000558790 ARHGAP31Q2M1Z3 1444 aa15.28■□□□□ 0.04
SPG11-212ENST00000558790 TRIM35Q9UPQ4 493 aa15.27■□□□□ 0.04
SPG11-212ENST00000558790 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.03
SPG11-212ENST00000558790 ABCC5O15440 1437 aa15.26■□□□□ 0.03
SPG11-212ENST00000558790 FAM135BQ49AJ0 1406 aa15.26■□□□□ 0.03
SPG11-212ENST00000558790 ATN1P54259 1190 aaPredicted RBP15.26■□□□□ 0.03
SPG11-212ENST00000558790 SOX12O15370 315 aa15.25■□□□□ 0.03
SPG11-212ENST00000558790 RYDENQ9NUL5 291 aaKnown RBP15.25■□□□□ 0.03
SPG11-212ENST00000558790 PHLPP1O60346 1717 aa15.25■□□□□ 0.03
SPG11-212ENST00000558790 DAPK1P53355 1430 aa15.25■□□□□ 0.03
SPG11-212ENST00000558790 LOC105371045A0A1W2PR82 267 aa15.24■□□□□ 0.03
SPG11-212ENST00000558790 FBXO22Q8NEZ5 403 aa15.24■□□□□ 0.03
SPG11-212ENST00000558790 LRP6O75581 1613 aa15.24■□□□□ 0.03
SPG11-212ENST00000558790 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
SPG11-212ENST00000558790 LMTK2Q8IWU2 1503 aa15.23■□□□□ 0.03
SPG11-212ENST00000558790 ATMINO43313 823 aaPredicted RBP15.23■□□□□ 0.03
SPG11-212ENST00000558790 MKRN3Q13064 507 aaKnown RBP15.23■□□□□ 0.03
SPG11-212ENST00000558790 LTKP29376 864 aa15.22■□□□□ 0.03
SPG11-212ENST00000558790 NLRP6P59044 892 aa15.22■□□□□ 0.03
SPG11-212ENST00000558790 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
SPG11-212ENST00000558790 ADGRB3O60242 1522 aa15.22■□□□□ 0.03
SPG11-212ENST00000558790 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
SPG11-212ENST00000558790 NWD1Q149M9 1564 aa15.2■□□□□ 0.02
SPG11-212ENST00000558790 GCC2Q8IWJ2 1684 aa15.2■□□□□ 0.02
SPG11-212ENST00000558790 ASTLQ6HA08 431 aaPredicted RBP15.2■□□□□ 0.02
SPG11-212ENST00000558790 RRP7BPQ9NSQ0 103 aa15.19■□□□□ 0.02
SPG11-212ENST00000558790 TMEM2Q9UHN6 1383 aa15.19■□□□□ 0.02
SPG11-212ENST00000558790 TET3O43151 1660 aa15.19■□□□□ 0.02
SPG11-212ENST00000558790 PPP1R37O75864 691 aa15.18■□□□□ 0.02
SPG11-212ENST00000558790 TXNDC2Q86VQ3 553 aa15.18■□□□□ 0.02
SPG11-212ENST00000558790 RBM33Q96EV2 1170 aaKnown RBP15.18■□□□□ 0.02
SPG11-212ENST00000558790 KANK1Q14678 1352 aa15.17■□□□□ 0.02
SPG11-212ENST00000558790 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
SPG11-212ENST00000558790 DCBLD2Q96PD2 775 aa15.17■□□□□ 0.02
SPG11-212ENST00000558790 KDM2AQ9Y2K7 1162 aa15.17■□□□□ 0.02
SPG11-212ENST00000558790 COL16A1Q07092 1604 aaPredicted RBP15.17■□□□□ 0.02
SPG11-212ENST00000558790 EP400Q96L91 3159 aa15.16■□□□□ 0.02
SPG11-212ENST00000558790 SETBP1Q9Y6X0 1596 aa15.15■□□□□ 0.02
SPG11-212ENST00000558790 CHD2O14647 1828 aaKnown RBP15.15■□□□□ 0.02
SPG11-212ENST00000558790 ADGRL2O95490 1459 aa15.15■□□□□ 0.02
SPG11-212ENST00000558790 EID1Q9Y6B2 187 aa15.15■□□□□ 0.02
SPG11-212ENST00000558790 NOS1P29475 1434 aa15.15■□□□□ 0.02
SPG11-212ENST00000558790 ANKRD30AQ9BXX3 1397 aa15.14■□□□□ 0.01
SPG11-212ENST00000558790 VSIG10Q8N0Z9 540 aa15.14■□□□□ 0.01
SPG11-212ENST00000558790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.14■□□□□ 0.01
SPG11-212ENST00000558790 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.01
SPG11-212ENST00000558790 TMEM94Q12767 1356 aa15.13■□□□□ 0.01
SPG11-212ENST00000558790 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
SPG11-212ENST00000558790 JCADQ9P266 1359 aa15.12■□□□□ 0.01
SPG11-212ENST00000558790 UNC13BO14795 1591 aa15.11■□□□□ 0.01
SPG11-212ENST00000558790 TMEM131LA2VDJ0 1609 aa15.11■□□□□ 0.01
SPG11-212ENST00000558790 CHIC2Q9UKJ5 165 aa15.11■□□□□ 0.01
SPG11-212ENST00000558790 E9PCH4 1651 aa15.1■□□□□ 0.01
SPG11-212ENST00000558790 RPRD2Q5VT52 1461 aaKnown RBP15.1■□□□□ 0.01
SPG11-212ENST00000558790 IDI1Q13907 227 aa15.1■□□□□ 0.01
SPG11-212ENST00000558790 ZFYVE9O95405 1425 aa15.09■□□□□ 0.01
SPG11-212ENST00000558790 POTEIP0CG38 1075 aa15.08■□□□□ 0
SPG11-212ENST00000558790 RXRBP28702 533 aa15.08■□□□□ 0
SPG11-212ENST00000558790 ZNF772Q68DY9 489 aaPredicted RBP15.08■□□□□ 0
SPG11-212ENST00000558790 SHPRHQ149N8 1683 aa15.08■□□□□ 0
SPG11-212ENST00000558790 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
SPG11-212ENST00000558790 MEX3CQ5U5Q3 659 aaKnown RBP15.07■□□□□ 0
SPG11-212ENST00000558790 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
SPG11-212ENST00000558790 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
SPG11-212ENST00000558790 RGS12O14924 1447 aa15.07■□□□□ 0
SPG11-212ENST00000558790 KCNA6P17658 529 aa15.06■□□□□ 0
SPG11-212ENST00000558790 ANKRD50Q9ULJ7 1429 aa15.06■□□□□ 0
SPG11-212ENST00000558790 DPY19L2Q6NUT2 758 aa15.05■□□□□ -0
SPG11-212ENST00000558790 IQGAP3Q86VI3 1631 aa15.05■□□□□ -0
SPG11-212ENST00000558790 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.03■□□□□ -0
SPG11-212ENST00000558790 DIP2AQ14689 1571 aa15.03■□□□□ -0
SPG11-212ENST00000558790 PLEKHG1Q9ULL1 1385 aa15.03■□□□□ -0
SPG11-212ENST00000558790 IRX5P78411 483 aaPredicted RBP15.03■□□□□ -0
SPG11-212ENST00000558790 PDCD7Q8N8D1 485 aaKnown RBP15.03■□□□□ -0
SPG11-212ENST00000558790 RIMS2Q9UQ26 1411 aa15.02■□□□□ -0
SPG11-212ENST00000558790 MSH6P52701 1360 aa15.02■□□□□ -0
SPG11-212ENST00000558790 IER5LQ5T953 404 aa15.02■□□□□ -0
SPG11-212ENST00000558790 PROSER2Q86WR7 435 aaPredicted RBP15.02■□□□□ -0
SPG11-212ENST00000558790 SLC52A1Q9NWF4 448 aa15.01□□□□□ -0.01
SPG11-212ENST00000558790 SLAIN2Q9P270 581 aa15.01□□□□□ -0.01
SPG11-212ENST00000558790 SPATA31A6Q5VVP1 1343 aa15□□□□□ -0.01
SPG11-212ENST00000558790 AFF2P51816 1311 aa14.99□□□□□ -0.01
SPG11-212ENST00000558790 FAM50AQ14320 339 aaKnown RBP14.99□□□□□ -0.01
SPG11-212ENST00000558790 SPHKAPQ2M3C7 1700 aa14.99□□□□□ -0.01
SPG11-212ENST00000558790 BCANQ96GW7 911 aa14.98□□□□□ -0.01
SPG11-212ENST00000558790 OCEL1Q9H607 264 aa14.98□□□□□ -0.01
SPG11-212ENST00000558790 AHDC1Q5TGY3 1603 aaPredicted RBP14.98□□□□□ -0.01
SPG11-212ENST00000558790 NRXN3Q9Y4C0 1643 aa14.98□□□□□ -0.01
SPG11-212ENST00000558790 NUTM2BA6NNL0 878 aaPredicted RBP14.97□□□□□ -0.01
SPG11-212ENST00000558790 NUTM2EB1AL46 878 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms