RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 IFT57Q9NWB7 429 aa12.21□□□□□ -0.45
TRPM1-207ENST00000558445 PRPF40AO75400 957 aaKnown RBP12.2□□□□□ -0.46
TRPM1-207ENST00000558445 CASQ1P31415 396 aa12.2□□□□□ -0.46
TRPM1-207ENST00000558445 BMS1Q14692 1282 aaKnown RBP12.2□□□□□ -0.46
TRPM1-207ENST00000558445 RNF20Q5VTR2 975 aa12.2□□□□□ -0.46
TRPM1-207ENST00000558445 RBSNQ9H1K0 784 aa12.2□□□□□ -0.46
TRPM1-207ENST00000558445 RIOK3O14730 519 aaKnown RBP12.2□□□□□ -0.46
TRPM1-207ENST00000558445 LRSAM1Q6UWE0 723 aa12.2□□□□□ -0.46
TRPM1-207ENST00000558445 DRC1Q96MC2 740 aa12.2□□□□□ -0.46
TRPM1-207ENST00000558445 FEZ2Q9UHY8 353 aaPredicted RBP12.2□□□□□ -0.46
TRPM1-207ENST00000558445 UACAQ9BZF9 1416 aa12.2□□□□□ -0.46
TRPM1-207ENST00000558445 SYCE3A1L190 88 aa12.2□□□□□ -0.46
TRPM1-207ENST00000558445 KCNG1Q9UIX4 513 aa12.2□□□□□ -0.46
TRPM1-207ENST00000558445 BAG4O95429 457 aaKnown RBP12.19□□□□□ -0.46
TRPM1-207ENST00000558445 ZNF397Q8NF99 534 aaPredicted RBP12.19□□□□□ -0.46
TRPM1-207ENST00000558445 FMN1Q68DA7 1419 aa12.19□□□□□ -0.46
TRPM1-207ENST00000558445 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
TRPM1-207ENST00000558445 ZRSR1Q15695 479 aaKnown RBP12.19□□□□□ -0.46
TRPM1-207ENST00000558445 CCDC18Q5T9S5 1454 aa12.19□□□□□ -0.46
TRPM1-207ENST00000558445 LRCH2Q5VUJ6 765 aa12.19□□□□□ -0.46
TRPM1-207ENST00000558445 RAPGEF2Q9Y4G8 1499 aa12.18□□□□□ -0.46
TRPM1-207ENST00000558445 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
TRPM1-207ENST00000558445 KIF1CO43896 1103 aaKnown RBP12.18□□□□□ -0.46
TRPM1-207ENST00000558445 PDLIM2Q96JY6 352 aa12.18□□□□□ -0.46
TRPM1-207ENST00000558445 SSFA2P28290 1259 aa12.18□□□□□ -0.46
TRPM1-207ENST00000558445 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
TRPM1-207ENST00000558445 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
TRPM1-207ENST00000558445 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
TRPM1-207ENST00000558445 SCRIBQ14160 1630 aa12.18□□□□□ -0.46
TRPM1-207ENST00000558445 U2SURPO15042 1029 aaKnown RBP12.17□□□□□ -0.46
TRPM1-207ENST00000558445 ANKRD20A12PQ8NF67 263 aa12.17□□□□□ -0.46
TRPM1-207ENST00000558445 NRDCO43847 1150 aa12.17□□□□□ -0.46
TRPM1-207ENST00000558445 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
TRPM1-207ENST00000558445 CCDC191Q8NCU4 936 aa12.17□□□□□ -0.46
TRPM1-207ENST00000558445 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
TRPM1-207ENST00000558445 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
TRPM1-207ENST00000558445 PDZRN3Q9UPQ7 1066 aa12.17□□□□□ -0.46
TRPM1-207ENST00000558445 H0YHG0 523 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 DHX16O60231 1041 aaKnown RBP12.16□□□□□ -0.46
TRPM1-207ENST00000558445 ZNF853P0CG23 659 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 PSEN1P49768 467 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 SARNPP82979 210 aaKnown RBP12.16□□□□□ -0.46
TRPM1-207ENST00000558445 RABEP1Q15276 862 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 SLFN14P0C7P3 912 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 GIMAP7Q8NHV1 300 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 HNRNPH2P55795 449 aaKnown RBP12.16□□□□□ -0.46
TRPM1-207ENST00000558445 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 UVSSAQ2YD98 709 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 JRKLQ9Y4A0 524 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 PAXBP1Q9Y5B6 917 aa12.16□□□□□ -0.46
TRPM1-207ENST00000558445 USP19O94966 1318 aa12.15□□□□□ -0.46
TRPM1-207ENST00000558445 TPD52L1Q16890 204 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-207ENST00000558445 CT47A1Q5JQC4 288 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-207ENST00000558445 PSMD1Q99460 953 aa12.15□□□□□ -0.46
TRPM1-207ENST00000558445 SNX21Q969T3 373 aa12.15□□□□□ -0.46
TRPM1-207ENST00000558445 DDX41Q9UJV9 622 aaKnown RBP12.15□□□□□ -0.46
TRPM1-207ENST00000558445 SYCP1Q15431 976 aa12.14□□□□□ -0.47
TRPM1-207ENST00000558445 SMTNL1A8MU46 457 aa12.14□□□□□ -0.47
TRPM1-207ENST00000558445 MPHOSPH10O00566 681 aaKnown RBP12.14□□□□□ -0.47
TRPM1-207ENST00000558445 PDE3AQ14432 1141 aa12.14□□□□□ -0.47
TRPM1-207ENST00000558445 MAP2K2P36507 400 aa12.14□□□□□ -0.47
TRPM1-207ENST00000558445 FKBP5Q13451 457 aaPredicted RBP12.14□□□□□ -0.47
TRPM1-207ENST00000558445 PAIP2Q9BPZ3 127 aaKnown RBP12.14□□□□□ -0.47
TRPM1-207ENST00000558445 TTC12Q9H892 705 aaPredicted RBP12.14□□□□□ -0.47
TRPM1-207ENST00000558445 LIG1P18858 919 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 GUCY2CP25092 1073 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 SLC52A1Q9NWF4 448 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 MRVI1Q9Y6F6 885 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 ARHGAP35Q9NRY4 1499 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 RDXP35241 583 aaKnown RBP12.13□□□□□ -0.47
TRPM1-207ENST00000558445 NBPF20Q3BBV1 942 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 CARD11Q9BXL7 1154 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 PLEKHH2Q8IVE3 1493 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 TULP2O00295 520 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 TPRNQ4KMQ1 711 aa12.13□□□□□ -0.47
TRPM1-207ENST00000558445 LRRFIP2Q9Y608 721 aaKnown RBP12.13□□□□□ -0.47
TRPM1-207ENST00000558445 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
TRPM1-207ENST00000558445 MAP2K1Q02750 393 aaPredicted RBP12.12□□□□□ -0.47
TRPM1-207ENST00000558445 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
TRPM1-207ENST00000558445 ST18O60284 1047 aa12.12□□□□□ -0.47
TRPM1-207ENST00000558445 RRP7BPQ9NSQ0 103 aa12.12□□□□□ -0.47
TRPM1-207ENST00000558445 REC8O95072 547 aa12.12□□□□□ -0.47
TRPM1-207ENST00000558445 IVLP07476 585 aa12.12□□□□□ -0.47
TRPM1-207ENST00000558445 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
TRPM1-207ENST00000558445 USP25Q9UHP3 1055 aa12.12□□□□□ -0.47
TRPM1-207ENST00000558445 MORC2Q9Y6X9 1032 aaPredicted RBP12.12□□□□□ -0.47
TRPM1-207ENST00000558445 CAPN2P17655 700 aa12.11□□□□□ -0.47
TRPM1-207ENST00000558445 TMED8Q6PL24 325 aaPredicted RBP12.11□□□□□ -0.47
TRPM1-207ENST00000558445 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
TRPM1-207ENST00000558445 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
TRPM1-207ENST00000558445 POLR3GO15318 223 aaPredicted RBP12.11□□□□□ -0.47
TRPM1-207ENST00000558445 CASC1Q6TDU7 716 aa12.11□□□□□ -0.47
TRPM1-207ENST00000558445 RPAINQ86UA6 219 aa12.11□□□□□ -0.47
TRPM1-207ENST00000558445 ZNF526Q8TF50 670 aaPredicted RBP12.11□□□□□ -0.47
TRPM1-207ENST00000558445 ANKRD7Q92527 254 aa12.11□□□□□ -0.47
TRPM1-207ENST00000558445 RTF1Q92541 710 aaKnown RBP12.11□□□□□ -0.47
TRPM1-207ENST00000558445 CTNNA3Q9UI47 895 aa12.11□□□□□ -0.47
TRPM1-207ENST00000558445 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms