RNA–Protein interactions for RNA: ENST00000558170.6

ZEB2-225, Transcript of zinc finger E-box binding homeobox 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZEB2, Length 4,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-225ENST00000558170 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.56
ZEB2-225ENST00000558170 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.56
ZEB2-225ENST00000558170 MCM4P33991 863 aa18.52■□□□□ 0.56
ZEB2-225ENST00000558170 C1orf115Q9H7X2 142 aa18.52■□□□□ 0.56
ZEB2-225ENST00000558170 NOB1Q9ULX3 412 aaKnown RBP18.52■□□□□ 0.56
ZEB2-225ENST00000558170 HMOX1P09601 288 aa18.52■□□□□ 0.55
ZEB2-225ENST00000558170 WDR63Q8IWG1 891 aa18.52■□□□□ 0.55
ZEB2-225ENST00000558170 COL17A1Q9UMD9 1497 aaPredicted RBP18.51■□□□□ 0.55
ZEB2-225ENST00000558170 PLCB2Q00722 1185 aa18.51■□□□□ 0.55
ZEB2-225ENST00000558170 SCAPERQ9BY12 1400 aa18.51■□□□□ 0.55
ZEB2-225ENST00000558170 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
ZEB2-225ENST00000558170 CALD1Q05682 793 aaKnown RBP18.5■□□□□ 0.55
ZEB2-225ENST00000558170 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
ZEB2-225ENST00000558170 ARID3AQ99856 593 aa18.5■□□□□ 0.55
ZEB2-225ENST00000558170 A2MP01023 1474 aa18.49■□□□□ 0.55
ZEB2-225ENST00000558170 NINLQ9Y2I6 1382 aa18.48■□□□□ 0.55
ZEB2-225ENST00000558170 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
ZEB2-225ENST00000558170 SCAF11Q99590 1463 aaKnown RBP18.48■□□□□ 0.55
ZEB2-225ENST00000558170 RLBP1P12271 317 aa18.48■□□□□ 0.55
ZEB2-225ENST00000558170 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
ZEB2-225ENST00000558170 HSP90AA2PQ14568 343 aaPredicted RBP18.47■□□□□ 0.55
ZEB2-225ENST00000558170 SLC4A10Q6U841 1118 aa18.47■□□□□ 0.55
ZEB2-225ENST00000558170 MRE11P49959 708 aa18.46■□□□□ 0.55
ZEB2-225ENST00000558170 CARD14Q9BXL6 1004 aa18.46■□□□□ 0.55
ZEB2-225ENST00000558170 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
ZEB2-225ENST00000558170 MBD5Q9P267 1494 aa18.45■□□□□ 0.54
ZEB2-225ENST00000558170 SSH1Q8WYL5 1049 aa18.45■□□□□ 0.54
ZEB2-225ENST00000558170 BLMP54132 1417 aaPredicted RBP18.45■□□□□ 0.54
ZEB2-225ENST00000558170 LRRIQ1Q96JM4 1722 aa18.45■□□□□ 0.54
ZEB2-225ENST00000558170 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
ZEB2-225ENST00000558170 TMEM57Q8N5G2 664 aa18.45■□□□□ 0.54
ZEB2-225ENST00000558170 TBC1D32Q96NH3 1257 aa18.44■□□□□ 0.54
ZEB2-225ENST00000558170 NUTM2FA1L443 756 aa18.44■□□□□ 0.54
ZEB2-225ENST00000558170 PTMSP20962 102 aa18.44■□□□□ 0.54
ZEB2-225ENST00000558170 FOXD4L6Q3SYB3 417 aaPredicted RBP18.44■□□□□ 0.54
ZEB2-225ENST00000558170 FOXD4L3Q6VB84 417 aaPredicted RBP18.44■□□□□ 0.54
ZEB2-225ENST00000558170 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
ZEB2-225ENST00000558170 ASXL1Q8IXJ9 1541 aa18.43■□□□□ 0.54
ZEB2-225ENST00000558170 PRKAR2BP31323 418 aa18.42■□□□□ 0.54
ZEB2-225ENST00000558170 SHANK2Q9UPX8 1470 aa18.42■□□□□ 0.54
ZEB2-225ENST00000558170 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
ZEB2-225ENST00000558170 SKOR2Q2VWA4 1001 aaPredicted RBP18.41■□□□□ 0.54
ZEB2-225ENST00000558170 TRIM27P14373 513 aa18.41■□□□□ 0.54
ZEB2-225ENST00000558170 VSIG10Q8N0Z9 540 aa18.4■□□□□ 0.54
ZEB2-225ENST00000558170 GPRASP1Q5JY77 1395 aa18.39■□□□□ 0.54
ZEB2-225ENST00000558170 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.53
ZEB2-225ENST00000558170 MCTP1Q6DN14 999 aa18.39■□□□□ 0.53
ZEB2-225ENST00000558170 GRPEL1Q9HAV7 217 aa18.39■□□□□ 0.53
ZEB2-225ENST00000558170 ST18O60284 1047 aa18.38■□□□□ 0.53
ZEB2-225ENST00000558170 CFAP44Q96MT7 982 aa18.38■□□□□ 0.53
ZEB2-225ENST00000558170 TRIM6-TRIM34B2RNG4 842 aa18.38■□□□□ 0.53
ZEB2-225ENST00000558170 PANK2Q9BZ23 570 aa18.38■□□□□ 0.53
ZEB2-225ENST00000558170 NUP160Q12769 1436 aa18.38■□□□□ 0.53
ZEB2-225ENST00000558170 CHD1LQ86WJ1 897 aa18.37■□□□□ 0.53
ZEB2-225ENST00000558170 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
ZEB2-225ENST00000558170 CEP170Q5SW79 1584 aa18.37■□□□□ 0.53
ZEB2-225ENST00000558170 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
ZEB2-225ENST00000558170 MCCP23508 829 aa18.37■□□□□ 0.53
ZEB2-225ENST00000558170 PIK3C2GO75747 1445 aa18.36■□□□□ 0.53
ZEB2-225ENST00000558170 RAPGEF3O95398 923 aa18.36■□□□□ 0.53
ZEB2-225ENST00000558170 PRAM1Q96QH2 718 aa18.36■□□□□ 0.53
ZEB2-225ENST00000558170 LMOD3Q0VAK6 560 aa18.35■□□□□ 0.53
ZEB2-225ENST00000558170 MAGI2Q86UL8 1455 aa18.35■□□□□ 0.53
ZEB2-225ENST00000558170 ADGBQ8N7X0 1667 aa18.34■□□□□ 0.53
ZEB2-225ENST00000558170 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
ZEB2-225ENST00000558170 API5Q9BZZ5 524 aaKnown RBP18.34■□□□□ 0.53
ZEB2-225ENST00000558170 GNAI1P63096 354 aa18.33■□□□□ 0.53
ZEB2-225ENST00000558170 CDC45O75419 566 aa18.33■□□□□ 0.53
ZEB2-225ENST00000558170 XRCC6P12956 609 aaKnown RBP eCLIP18.33■□□□□ 0.53
ZEB2-225ENST00000558170 OS9Q13438 667 aaPredicted RBP18.33■□□□□ 0.53
ZEB2-225ENST00000558170 HMMRO75330 724 aa18.33■□□□□ 0.52
ZEB2-225ENST00000558170 CT47B1P0C2W7 299 aaPredicted RBP18.33■□□□□ 0.52
ZEB2-225ENST00000558170 CABP1Q9NZU7 370 aa18.33■□□□□ 0.52
ZEB2-225ENST00000558170 CAVIN1Q6NZI2 390 aaKnown RBP18.32■□□□□ 0.52
ZEB2-225ENST00000558170 RILPL2Q969X0 211 aa18.32■□□□□ 0.52
ZEB2-225ENST00000558170 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
ZEB2-225ENST00000558170 ESPNB1AK53 854 aa18.31■□□□□ 0.52
ZEB2-225ENST00000558170 NOS1P29475 1434 aa18.31■□□□□ 0.52
ZEB2-225ENST00000558170 ZNF521Q96K83 1311 aa18.31■□□□□ 0.52
ZEB2-225ENST00000558170 TWISTNBQ3B726 338 aaPredicted RBP18.31■□□□□ 0.52
ZEB2-225ENST00000558170 COG3Q96JB2 828 aa18.31■□□□□ 0.52
ZEB2-225ENST00000558170 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
ZEB2-225ENST00000558170 FBLN1P23142 703 aa18.3■□□□□ 0.52
ZEB2-225ENST00000558170 STK31Q9BXU1 1019 aa18.29■□□□□ 0.52
ZEB2-225ENST00000558170 TNPO1Q92973 898 aaKnown RBP18.29■□□□□ 0.52
ZEB2-225ENST00000558170 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
ZEB2-225ENST00000558170 KCNJ4P48050 445 aa18.29■□□□□ 0.52
ZEB2-225ENST00000558170 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
ZEB2-225ENST00000558170 DUOX2Q9NRD8 1548 aa18.28■□□□□ 0.52
ZEB2-225ENST00000558170 POLR3AO14802 1390 aaPredicted RBP18.28■□□□□ 0.52
ZEB2-225ENST00000558170 INSRP06213 1382 aa18.28■□□□□ 0.52
ZEB2-225ENST00000558170 EIF2AK4Q9P2K8 1649 aaKnown RBP18.28■□□□□ 0.52
ZEB2-225ENST00000558170 ABCC10Q5T3U5 1492 aa18.27■□□□□ 0.52
ZEB2-225ENST00000558170 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.52
ZEB2-225ENST00000558170 NUCB2P80303 420 aa18.27■□□□□ 0.52
ZEB2-225ENST00000558170 REC8O95072 547 aa18.27■□□□□ 0.51
ZEB2-225ENST00000558170 RNF214Q8ND24 703 aa18.27■□□□□ 0.51
ZEB2-225ENST00000558170 FAM69CQ0P6D2 419 aa18.26■□□□□ 0.51
ZEB2-225ENST00000558170 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
ZEB2-225ENST00000558170 PRPF40AO75400 957 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms