RNA–Protein interactions for RNA: ENST00000558094.1

PSMA4-204, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3 BASIC

Gene PSMA4, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-204ENST00000558094 SALL2Q9Y467 1007 aaPredicted RBP13.07□□□□□ -0.32
PSMA4-204ENST00000558094 WNT7AO00755 349 aa13.06□□□□□ -0.32
PSMA4-204ENST00000558094 MSS51Q4VC12 460 aa13.06□□□□□ -0.32
PSMA4-204ENST00000558094 GNPATO15228 680 aa13.05□□□□□ -0.32
PSMA4-204ENST00000558094 P3H3Q8IVL6 736 aa13.05□□□□□ -0.32
PSMA4-204ENST00000558094 SNIP1Q8TAD8 396 aaKnown RBP13.05□□□□□ -0.32
PSMA4-204ENST00000558094 GPR37O15354 613 aa13.04□□□□□ -0.32
PSMA4-204ENST00000558094 J3QL48 77 aa13.03□□□□□ -0.32
PSMA4-204ENST00000558094 INSM1Q01101 510 aaPredicted RBP13.03□□□□□ -0.32
PSMA4-204ENST00000558094 TRIM32Q13049 653 aa13.03□□□□□ -0.32
PSMA4-204ENST00000558094 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
PSMA4-204ENST00000558094 MRGPRX2Q96LB1 330 aa13.02□□□□□ -0.33
PSMA4-204ENST00000558094 TERTO14746 1132 aaKnown RBP13□□□□□ -0.33
PSMA4-204ENST00000558094 SULF1Q8IWU6 871 aa13□□□□□ -0.33
PSMA4-204ENST00000558094 TRIM47Q96LD4 638 aa13□□□□□ -0.33
PSMA4-204ENST00000558094 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
PSMA4-204ENST00000558094 HPS1Q92902 700 aa12.98□□□□□ -0.33
PSMA4-204ENST00000558094 MMP16P51512 607 aa12.96□□□□□ -0.33
PSMA4-204ENST00000558094 SENP2Q9HC62 589 aa12.96□□□□□ -0.33
PSMA4-204ENST00000558094 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
PSMA4-204ENST00000558094 Q3C1V9 767 aa12.91□□□□□ -0.34
PSMA4-204ENST00000558094 DXOO77932 396 aaKnown RBP12.9□□□□□ -0.34
PSMA4-204ENST00000558094 SKOR1P84550 965 aa12.89□□□□□ -0.35
PSMA4-204ENST00000558094 REPIN1Q9BWE0 567 aaKnown RBP12.89□□□□□ -0.35
PSMA4-204ENST00000558094 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
PSMA4-204ENST00000558094 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
PSMA4-204ENST00000558094 KIFC2Q96AC6 838 aa12.88□□□□□ -0.35
PSMA4-204ENST00000558094 USB1Q9BQ65 265 aaKnown RBP12.88□□□□□ -0.35
PSMA4-204ENST00000558094 CCDC24Q8N4L8 307 aa12.87□□□□□ -0.35
PSMA4-204ENST00000558094 HLA-CQ95604 372 aa12.86□□□□□ -0.35
PSMA4-204ENST00000558094 CD46P15529 392 aa12.85□□□□□ -0.35
PSMA4-204ENST00000558094 WNT7BP56706 349 aa12.82□□□□□ -0.36
PSMA4-204ENST00000558094 KDM4AO75164 1064 aa12.81□□□□□ -0.36
PSMA4-204ENST00000558094 ALDH1A1P00352 501 aa12.81□□□□□ -0.36
PSMA4-204ENST00000558094 BMP1P13497 986 aa12.79□□□□□ -0.36
PSMA4-204ENST00000558094 GMPRP36959 345 aa12.78□□□□□ -0.36
PSMA4-204ENST00000558094 GPIHBP1Q8IV16 184 aa12.78□□□□□ -0.36
PSMA4-204ENST00000558094 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
PSMA4-204ENST00000558094 NXF1Q9UBU9 619 aaKnown RBP12.78□□□□□ -0.36
PSMA4-204ENST00000558094 LORP23490 312 aaPredicted RBP12.77□□□□□ -0.37
PSMA4-204ENST00000558094 TRIM46Q7Z4K8 759 aa12.77□□□□□ -0.37
PSMA4-204ENST00000558094 VEGFBP49765 207 aa12.75□□□□□ -0.37
PSMA4-204ENST00000558094 GUCA2AQ02747 115 aa12.75□□□□□ -0.37
PSMA4-204ENST00000558094 HOXA2O43364 376 aa12.74□□□□□ -0.37
PSMA4-204ENST00000558094 SIAH2O43255 324 aa12.73□□□□□ -0.37
PSMA4-204ENST00000558094 JUNDP17535 347 aa12.73□□□□□ -0.37
PSMA4-204ENST00000558094 SYMPKQ92797 1274 aaKnown RBP12.73□□□□□ -0.37
PSMA4-204ENST00000558094 FAM181BA6NEQ2 426 aa12.72□□□□□ -0.37
PSMA4-204ENST00000558094 USP46P62068 366 aa12.72□□□□□ -0.37
PSMA4-204ENST00000558094 ZSCAN1Q8NBB4 408 aa12.72□□□□□ -0.37
PSMA4-204ENST00000558094 CAPN5O15484 640 aaPredicted RBP12.71□□□□□ -0.37
PSMA4-204ENST00000558094 PTCRAQ6ISU1 281 aaPredicted RBP12.71□□□□□ -0.37
PSMA4-204ENST00000558094 EHBP1Q8NDI1 1231 aa12.71□□□□□ -0.37
PSMA4-204ENST00000558094 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
PSMA4-204ENST00000558094 IRF7Q92985 503 aa12.7□□□□□ -0.38
PSMA4-204ENST00000558094 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
PSMA4-204ENST00000558094 NUDT12Q9BQG2 462 aa12.68□□□□□ -0.38
PSMA4-204ENST00000558094 WASF2Q9Y6W5 498 aa12.68□□□□□ -0.38
PSMA4-204ENST00000558094 H3BM21 787 aa12.67□□□□□ -0.38
PSMA4-204ENST00000558094 MAP2K5Q13163 448 aa12.67□□□□□ -0.38
PSMA4-204ENST00000558094 NPAS3Q8IXF0 933 aa12.67□□□□□ -0.38
PSMA4-204ENST00000558094 SH3BP2P78314 561 aa12.63□□□□□ -0.39
PSMA4-204ENST00000558094 IRF6O14896 467 aa12.62□□□□□ -0.39
PSMA4-204ENST00000558094 RETREG3Q86VR2 466 aa12.62□□□□□ -0.39
PSMA4-204ENST00000558094 ZFP42Q96MM3 310 aa12.62□□□□□ -0.39
PSMA4-204ENST00000558094 LOC100996750A0A140TA64 210 aa12.61□□□□□ -0.39
PSMA4-204ENST00000558094 KRTAP4-6Q9BYQ5 205 aa12.61□□□□□ -0.39
PSMA4-204ENST00000558094 TLL2Q9Y6L7 1015 aa12.6□□□□□ -0.39
PSMA4-204ENST00000558094 PCDHGC3Q9UN70 934 aa12.57□□□□□ -0.4
PSMA4-204ENST00000558094 CCNYL3P0C7X3 344 aa12.56□□□□□ -0.4
PSMA4-204ENST00000558094 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
PSMA4-204ENST00000558094 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
PSMA4-204ENST00000558094 MS4A1P11836 297 aa12.55□□□□□ -0.4
PSMA4-204ENST00000558094 NUTM1Q86Y26 1132 aa12.54□□□□□ -0.4
PSMA4-204ENST00000558094 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
PSMA4-204ENST00000558094 UNC93B1Q9H1C4 597 aa12.54□□□□□ -0.4
PSMA4-204ENST00000558094 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
PSMA4-204ENST00000558094 SOBPA7XYQ1 873 aa12.53□□□□□ -0.4
PSMA4-204ENST00000558094 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
PSMA4-204ENST00000558094 FDX1P10109 184 aa12.53□□□□□ -0.4
PSMA4-204ENST00000558094 MINK1Q8N4C8 1332 aaPredicted RBP12.53□□□□□ -0.4
PSMA4-204ENST00000558094 NNTQ13423 1086 aa12.52□□□□□ -0.41
PSMA4-204ENST00000558094 MRPL14Q6P1L8 145 aaKnown RBP12.52□□□□□ -0.41
PSMA4-204ENST00000558094 BAP1Q92560 729 aa12.52□□□□□ -0.41
PSMA4-204ENST00000558094 PURBQ96QR8 312 aaKnown RBP12.51□□□□□ -0.41
PSMA4-204ENST00000558094 PTPRNQ16849 979 aa12.5□□□□□ -0.41
PSMA4-204ENST00000558094 TIMP2P16035 220 aa12.49□□□□□ -0.41
PSMA4-204ENST00000558094 CLCN1P35523 988 aa12.49□□□□□ -0.41
PSMA4-204ENST00000558094 EVA1BQ9NVM1 165 aa12.49□□□□□ -0.41
PSMA4-204ENST00000558094 ZNF511Q8NB15 262 aa12.48□□□□□ -0.41
PSMA4-204ENST00000558094 SCARF1Q14162 830 aa12.47□□□□□ -0.41
PSMA4-204ENST00000558094 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.41
PSMA4-204ENST00000558094 VSIG8P0DPA2 414 aa12.46□□□□□ -0.41
PSMA4-204ENST00000558094 VARSP26640 1264 aaKnown RBP12.46□□□□□ -0.41
PSMA4-204ENST00000558094 WDR4P57081 412 aaKnown RBP12.46□□□□□ -0.41
PSMA4-204ENST00000558094 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
PSMA4-204ENST00000558094 ADH1CP00326 375 aa12.44□□□□□ -0.42
PSMA4-204ENST00000558094 MPNDQ8N594 471 aa12.44□□□□□ -0.42
PSMA4-204ENST00000558094 KLF16Q9BXK1 252 aaPredicted RBP12.44□□□□□ -0.42
PSMA4-204ENST00000558094 NDUFV2P19404 249 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms