RNA–Protein interactions for RNA: ENST00000557890.1

CYFIP1-201, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 2

Gene CYFIP1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-201ENST00000557890 SALL2Q9Y467 1007 aaPredicted RBP8.65□□□□□ -1.02
CYFIP1-201ENST00000557890 PDE4DQ08499 809 aa8.64□□□□□ -1.03
CYFIP1-201ENST00000557890 SPSB2Q99619 263 aa8.64□□□□□ -1.03
CYFIP1-201ENST00000557890 GOLGA3Q08378 1498 aa8.64□□□□□ -1.03
CYFIP1-201ENST00000557890 WIZO95785 1651 aa8.63□□□□□ -1.03
CYFIP1-201ENST00000557890 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
CYFIP1-201ENST00000557890 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
CYFIP1-201ENST00000557890 FAM9AQ8IZU1 332 aaPredicted RBP8.63□□□□□ -1.03
CYFIP1-201ENST00000557890 CEP162Q5TB80 1403 aa8.63□□□□□ -1.03
CYFIP1-201ENST00000557890 RNF223E7ERA6 249 aa8.62□□□□□ -1.03
CYFIP1-201ENST00000557890 HOXA2O43364 376 aa8.62□□□□□ -1.03
CYFIP1-201ENST00000557890 S1PR4O95977 384 aa8.62□□□□□ -1.03
CYFIP1-201ENST00000557890 BRICD5Q6PL45 260 aa8.62□□□□□ -1.03
CYFIP1-201ENST00000557890 SLC6A16Q9GZN6 736 aa8.62□□□□□ -1.03
CYFIP1-201ENST00000557890 Q3C1V9 767 aa8.61□□□□□ -1.03
CYFIP1-201ENST00000557890 SMARCA4P51532 1647 aa8.61□□□□□ -1.03
CYFIP1-201ENST00000557890 BAZ1BQ9UIG0 1483 aaKnown RBP8.6□□□□□ -1.03
CYFIP1-201ENST00000557890 CEP164Q9UPV0 1460 aa8.6□□□□□ -1.03
CYFIP1-201ENST00000557890 TPRNQ4KMQ1 711 aa8.6□□□□□ -1.03
CYFIP1-201ENST00000557890 RNF19BQ6ZMZ0 732 aa8.6□□□□□ -1.03
CYFIP1-201ENST00000557890 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
CYFIP1-201ENST00000557890 HLA-CQ95604 372 aa8.6□□□□□ -1.03
CYFIP1-201ENST00000557890 CECR2Q9BXF3 1484 aa8.59□□□□□ -1.03
CYFIP1-201ENST00000557890 MS4A1P11836 297 aa8.59□□□□□ -1.03
CYFIP1-201ENST00000557890 FAM160A2Q8N612 972 aaPredicted RBP8.59□□□□□ -1.03
CYFIP1-201ENST00000557890 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
CYFIP1-201ENST00000557890 BEGAINQ9BUH8 593 aa8.59□□□□□ -1.03
CYFIP1-201ENST00000557890 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
CYFIP1-201ENST00000557890 V9GY48 417 aaPredicted RBP8.59□□□□□ -1.03
CYFIP1-201ENST00000557890 KIF21BO75037 1637 aa8.58□□□□□ -1.04
CYFIP1-201ENST00000557890 PPEF1O14829 653 aaPredicted RBP8.57□□□□□ -1.04
CYFIP1-201ENST00000557890 GUCA2AQ02747 115 aa8.56□□□□□ -1.04
CYFIP1-201ENST00000557890 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
CYFIP1-201ENST00000557890 SMARCA2P51531 1590 aa8.56□□□□□ -1.04
CYFIP1-201ENST00000557890 TTBK1Q5TCY1 1321 aaPredicted RBP8.55□□□□□ -1.04
CYFIP1-201ENST00000557890 MOXD2PA6NHM9 499 aa8.55□□□□□ -1.04
CYFIP1-201ENST00000557890 FDX1P10109 184 aa8.55□□□□□ -1.04
CYFIP1-201ENST00000557890 PRKCSHP14314 528 aaPredicted RBP8.55□□□□□ -1.04
CYFIP1-201ENST00000557890 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
CYFIP1-201ENST00000557890 USB1Q9BQ65 265 aaKnown RBP8.55□□□□□ -1.04
CYFIP1-201ENST00000557890 PEG3Q9GZU2 1588 aa8.54□□□□□ -1.04
CYFIP1-201ENST00000557890 EMID1Q96A84 441 aaPredicted RBP8.54□□□□□ -1.04
CYFIP1-201ENST00000557890 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
CYFIP1-201ENST00000557890 PCDHGC3Q9UN70 934 aa8.54□□□□□ -1.04
CYFIP1-201ENST00000557890 NDUFV2P19404 249 aa8.53□□□□□ -1.04
CYFIP1-201ENST00000557890 GJA5P36382 358 aa8.53□□□□□ -1.04
CYFIP1-201ENST00000557890 SLC19A1P41440 591 aa8.53□□□□□ -1.04
CYFIP1-201ENST00000557890 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
CYFIP1-201ENST00000557890 CCDC88BA6NC98 1476 aa8.52□□□□□ -1.05
CYFIP1-201ENST00000557890 MMP16P51512 607 aa8.52□□□□□ -1.05
CYFIP1-201ENST00000557890 IRX2Q9BZI1 471 aaPredicted RBP8.52□□□□□ -1.05
CYFIP1-201ENST00000557890 UBTFP17480 764 aaKnown RBP8.51□□□□□ -1.05
CYFIP1-201ENST00000557890 PLA2G2CQ5R387 149 aa8.51□□□□□ -1.05
CYFIP1-201ENST00000557890 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
CYFIP1-201ENST00000557890 SYMPKQ92797 1274 aaKnown RBP8.51□□□□□ -1.05
CYFIP1-201ENST00000557890 FCF1Q9Y324 198 aaKnown RBP8.51□□□□□ -1.05
CYFIP1-201ENST00000557890 GTF3C3Q9Y5Q9 886 aa8.51□□□□□ -1.05
CYFIP1-201ENST00000557890 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
CYFIP1-201ENST00000557890 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
CYFIP1-201ENST00000557890 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
CYFIP1-201ENST00000557890 VPS8Q8N3P4 1428 aa8.49□□□□□ -1.05
CYFIP1-201ENST00000557890 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
CYFIP1-201ENST00000557890 SPTLC1O15269 473 aa8.49□□□□□ -1.05
CYFIP1-201ENST00000557890 NEUROD1Q13562 356 aa8.49□□□□□ -1.05
CYFIP1-201ENST00000557890 SPRYD7Q5W111 196 aa8.49□□□□□ -1.05
CYFIP1-201ENST00000557890 KDM4CQ9H3R0 1056 aa8.48□□□□□ -1.05
CYFIP1-201ENST00000557890 GPBP1L1Q9HC44 474 aaPredicted RBP8.48□□□□□ -1.05
CYFIP1-201ENST00000557890 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
CYFIP1-201ENST00000557890 RIC3Q7Z5B4 369 aa8.47□□□□□ -1.05
CYFIP1-201ENST00000557890 ZNF598Q86UK7 904 aaKnown RBP8.47□□□□□ -1.05
CYFIP1-201ENST00000557890 CLIP1P30622 1438 aa8.46□□□□□ -1.05
CYFIP1-201ENST00000557890 ERICH3Q5RHP9 1530 aa8.46□□□□□ -1.05
CYFIP1-201ENST00000557890 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
CYFIP1-201ENST00000557890 JUNDP17535 347 aa8.46□□□□□ -1.06
CYFIP1-201ENST00000557890 RPIAP49247 311 aa8.46□□□□□ -1.06
CYFIP1-201ENST00000557890 MTMR2Q13614 643 aa8.46□□□□□ -1.06
CYFIP1-201ENST00000557890 PCDHB15Q9Y5E8 787 aa8.46□□□□□ -1.06
CYFIP1-201ENST00000557890 LAPTM4AQ15012 233 aa8.45□□□□□ -1.06
CYFIP1-201ENST00000557890 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
CYFIP1-201ENST00000557890 ABCC8Q09428 1581 aa8.44□□□□□ -1.06
CYFIP1-201ENST00000557890 TUSC1Q2TAM9 212 aa8.44□□□□□ -1.06
CYFIP1-201ENST00000557890 ZNF697Q5TEC3 545 aa8.44□□□□□ -1.06
CYFIP1-201ENST00000557890 PRPF38BQ5VTL8 546 aaKnown RBP8.44□□□□□ -1.06
CYFIP1-201ENST00000557890 GFRA3O60609 400 aa8.43□□□□□ -1.06
CYFIP1-201ENST00000557890 CD2BP2O95400 341 aaKnown RBP8.43□□□□□ -1.06
CYFIP1-201ENST00000557890 TRIM67Q6ZTA4 783 aa8.43□□□□□ -1.06
CYFIP1-201ENST00000557890 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
CYFIP1-201ENST00000557890 DDRGK1Q96HY6 314 aa8.43□□□□□ -1.06
CYFIP1-201ENST00000557890 FAM117AQ9C073 453 aa8.43□□□□□ -1.06
CYFIP1-201ENST00000557890 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
CYFIP1-201ENST00000557890 LIMD1Q9UGP4 676 aa8.43□□□□□ -1.06
CYFIP1-201ENST00000557890 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
CYFIP1-201ENST00000557890 DESI1Q6ICB0 168 aa8.42□□□□□ -1.06
CYFIP1-201ENST00000557890 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
CYFIP1-201ENST00000557890 NRG2O14511 850 aaPredicted RBP8.41□□□□□ -1.06
CYFIP1-201ENST00000557890 CCDC24Q8N4L8 307 aa8.41□□□□□ -1.06
CYFIP1-201ENST00000557890 SOGA1O94964 1423 aa8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 LILRB3O75022 631 aa8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
CYFIP1-201ENST00000557890 PRR20EP86478 221 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms