RNA–Protein interactions for RNA: ENST00000557608.1

RGMA-212, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 4

Gene RGMA, Length 473 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-212ENST00000557608 COL16A1Q07092 1604 aaPredicted RBP28.18■■■□□ 2.1
RGMA-212ENST00000557608 DISP3Q9P2K9 1392 aa28.17■■■□□ 2.1
RGMA-212ENST00000557608 MED1Q15648 1581 aaPredicted RBP28.16■■■□□ 2.1
RGMA-212ENST00000557608 NEUROD1Q13562 356 aa28.15■■■□□ 2.1
RGMA-212ENST00000557608 L3MBTL2Q969R5 705 aa28.15■■■□□ 2.1
RGMA-212ENST00000557608 PRAM1Q96QH2 718 aa28.14■■■□□ 2.1
RGMA-212ENST00000557608 NHSL1Q5SYE7 1610 aa28.14■■■□□ 2.09
RGMA-212ENST00000557608 TRAK1Q9UPV9 953 aa28.12■■■□□ 2.09
RGMA-212ENST00000557608 POGKQ9P215 609 aa28.11■■■□□ 2.09
RGMA-212ENST00000557608 JCADQ9P266 1359 aa28.11■■■□□ 2.09
RGMA-212ENST00000557608 FMN2Q9NZ56 1722 aa28.09■■■□□ 2.09
RGMA-212ENST00000557608 SAFB2Q14151 953 aaKnown RBP eCLIP28.07■■■□□ 2.08
RGMA-212ENST00000557608 ORAI2Q96SN7 254 aa28.07■■■□□ 2.08
RGMA-212ENST00000557608 ARHGEF28Q8N1W1 1705 aaKnown RBP28.06■■■□□ 2.08
RGMA-212ENST00000557608 ADGRB2O60241 1585 aa28.05■■■□□ 2.08
RGMA-212ENST00000557608 SHPRHQ149N8 1683 aa28.03■■■□□ 2.08
RGMA-212ENST00000557608 NBPF1Q3BBV0 1214 aa28.02■■■□□ 2.08
RGMA-212ENST00000557608 ESCO1Q5FWF5 840 aa28.02■■■□□ 2.08
RGMA-212ENST00000557608 NUTM2FA1L443 756 aa28■■■□□ 2.07
RGMA-212ENST00000557608 DDX17Q92841 729 aaKnown RBP28■■■□□ 2.07
RGMA-212ENST00000557608 PCGF6Q9BYE7 350 aa28■■■□□ 2.07
RGMA-212ENST00000557608 LRRC59Q96AG4 307 aaKnown RBP27.99■■■□□ 2.07
RGMA-212ENST00000557608 TRPM1Q7Z4N2 1603 aa27.99■■■□□ 2.07
RGMA-212ENST00000557608 SPATA31A6Q5VVP1 1343 aa27.98■■■□□ 2.07
RGMA-212ENST00000557608 TONSLQ96HA7 1378 aa27.98■■■□□ 2.07
RGMA-212ENST00000557608 SOS2Q07890 1332 aaPredicted RBP27.97■■■□□ 2.07
RGMA-212ENST00000557608 KIF1AQ12756 1690 aa27.97■■■□□ 2.07
RGMA-212ENST00000557608 RGPD8O14715 1765 aaPredicted RBP27.96■■■□□ 2.07
RGMA-212ENST00000557608 NPHP3Q7Z494 1330 aa27.96■■■□□ 2.07
RGMA-212ENST00000557608 MINK1Q8N4C8 1332 aaPredicted RBP27.96■■■□□ 2.07
RGMA-212ENST00000557608 PHF23Q9BUL5 403 aaPredicted RBP27.96■■■□□ 2.07
RGMA-212ENST00000557608 ANKARQ7Z5J8 1434 aa27.95■■■□□ 2.07
RGMA-212ENST00000557608 EIF3AQ14152 1382 aaKnown RBP27.95■■■□□ 2.06
RGMA-212ENST00000557608 HIRIP3Q9BW71 556 aaPredicted RBP27.94■■■□□ 2.06
RGMA-212ENST00000557608 WASLO00401 505 aaPredicted RBP27.92■■■□□ 2.06
RGMA-212ENST00000557608 USP32Q8NFA0 1604 aa27.92■■■□□ 2.06
RGMA-212ENST00000557608 PXDNQ92626 1479 aa27.91■■■□□ 2.06
RGMA-212ENST00000557608 FOXO3O43524 673 aa27.91■■■□□ 2.06
RGMA-212ENST00000557608 TULP4Q9NRJ4 1543 aa27.9■■■□□ 2.06
RGMA-212ENST00000557608 ROCK2O75116 1388 aaKnown RBP27.89■■■□□ 2.06
RGMA-212ENST00000557608 PNPLA6Q8IY17 1366 aa27.89■■■□□ 2.06
RGMA-212ENST00000557608 PHF8Q9UPP1 1060 aa27.89■■■□□ 2.06
RGMA-212ENST00000557608 NBPF8Q3BBV2 869 aa27.88■■■□□ 2.05
RGMA-212ENST00000557608 LRP6O75581 1613 aa27.88■■■□□ 2.05
RGMA-212ENST00000557608 CLSPNQ9HAW4 1339 aa27.86■■■□□ 2.05
RGMA-212ENST00000557608 CENPJQ9HC77 1338 aaPredicted RBP27.86■■■□□ 2.05
RGMA-212ENST00000557608 ILDR2Q71H61 639 aa27.85■■■□□ 2.05
RGMA-212ENST00000557608 GPRASP1Q5JY77 1395 aa27.85■■■□□ 2.05
RGMA-212ENST00000557608 QRICH2Q9H0J4 1663 aa27.83■■■□□ 2.05
RGMA-212ENST00000557608 PRR36Q9H6K5 1346 aa27.83■■■□□ 2.05
RGMA-212ENST00000557608 XPCQ01831 940 aaPredicted RBP27.82■■■□□ 2.04
RGMA-212ENST00000557608 COL22A1Q8NFW1 1626 aaPredicted RBP27.81■■■□□ 2.04
RGMA-212ENST00000557608 ITSN1Q15811 1721 aa27.81■■■□□ 2.04
RGMA-212ENST00000557608 NUTM2BA6NNL0 878 aaPredicted RBP27.81■■■□□ 2.04
RGMA-212ENST00000557608 NUTM2EB1AL46 878 aaPredicted RBP27.81■■■□□ 2.04
RGMA-212ENST00000557608 MEX3CQ5U5Q3 659 aaKnown RBP27.81■■■□□ 2.04
RGMA-212ENST00000557608 NUTM2AQ8IVF1 878 aaPredicted RBP27.81■■■□□ 2.04
RGMA-212ENST00000557608 RGS17Q9UGC6 210 aaPredicted RBP27.81■■■□□ 2.04
RGMA-212ENST00000557608 RALGAPBQ86X10 1494 aa27.81■■■□□ 2.04
RGMA-212ENST00000557608 KRT28Q7Z3Y7 464 aa27.8■■■□□ 2.04
RGMA-212ENST00000557608 CDK19Q9BWU1 502 aa27.8■■■□□ 2.04
RGMA-212ENST00000557608 ATP7BP35670 1465 aa27.8■■■□□ 2.04
RGMA-212ENST00000557608 PSME1Q06323 249 aa27.78■■■□□ 2.04
RGMA-212ENST00000557608 PMFBP1Q8TBY8 1022 aa27.78■■■□□ 2.04
RGMA-212ENST00000557608 NUDT16Q96DE0 195 aaKnown RBP27.78■■■□□ 2.04
RGMA-212ENST00000557608 SPATA31A3Q5VYP0 1347 aa27.76■■■□□ 2.03
RGMA-212ENST00000557608 SBNO1A3KN83 1393 aa27.74■■■□□ 2.03
RGMA-212ENST00000557608 CARD11Q9BXL7 1154 aa27.74■■■□□ 2.03
RGMA-212ENST00000557608 TOPAZ1Q8N9V7 1692 aa27.74■■■□□ 2.03
RGMA-212ENST00000557608 TIMELESSQ9UNS1 1208 aa27.73■■■□□ 2.03
RGMA-212ENST00000557608 TNS3Q68CZ2 1445 aa27.73■■■□□ 2.03
RGMA-212ENST00000557608 CCDC61Q9Y6R9 512 aa27.72■■■□□ 2.03
RGMA-212ENST00000557608 NGDNQ8NEJ9 315 aaKnown RBP27.71■■■□□ 2.03
RGMA-212ENST00000557608 SRPK2P78362 688 aaKnown RBP27.7■■■□□ 2.02
RGMA-212ENST00000557608 TRPM3Q9HCF6 1732 aaPredicted RBP27.7■■■□□ 2.02
RGMA-212ENST00000557608 EVC2Q86UK5 1308 aa27.68■■■□□ 2.02
RGMA-212ENST00000557608 ZNF772Q68DY9 489 aaPredicted RBP27.68■■■□□ 2.02
RGMA-212ENST00000557608 ARHGEF10O15013 1369 aa27.68■■■□□ 2.02
RGMA-212ENST00000557608 ADAMTS2O95450 1211 aa27.67■■■□□ 2.02
RGMA-212ENST00000557608 POTEAQ6S8J7 498 aa27.67■■■□□ 2.02
RGMA-212ENST00000557608 CCER1Q8TC90 406 aaPredicted RBP27.67■■■□□ 2.02
RGMA-212ENST00000557608 SBNO2Q9Y2G9 1366 aa27.66■■■□□ 2.02
RGMA-212ENST00000557608 PLEKHG3A1L390 1219 aa27.66■■■□□ 2.02
RGMA-212ENST00000557608 POLR3AO14802 1390 aaPredicted RBP27.65■■■□□ 2.02
RGMA-212ENST00000557608 C8orf37Q96NL8 207 aa27.65■■■□□ 2.02
RGMA-212ENST00000557608 CABP2Q9NPB3 220 aa27.65■■■□□ 2.02
RGMA-212ENST00000557608 AFF2P51816 1311 aa27.64■■■□□ 2.01
RGMA-212ENST00000557608 MARF1Q9Y4F3 1742 aaKnown RBP27.64■■■□□ 2.01
RGMA-212ENST00000557608 ALS2Q96Q42 1657 aa27.63■■■□□ 2.01
RGMA-212ENST00000557608 PPIP5K1Q6PFW1 1433 aa27.62■■■□□ 2.01
RGMA-212ENST00000557608 LMOD2Q6P5Q4 547 aa27.62■■■□□ 2.01
RGMA-212ENST00000557608 ACEP12821 1306 aa27.62■■■□□ 2.01
RGMA-212ENST00000557608 NGLY1Q96IV0 654 aa27.61■■■□□ 2.01
RGMA-212ENST00000557608 SOCS7O14512 581 aa27.6■■■□□ 2.01
RGMA-212ENST00000557608 ABCA3Q99758 1704 aa27.58■■■□□ 2.01
RGMA-212ENST00000557608 PAK3O75914 559 aaPredicted RBP27.57■■■□□ 2
RGMA-212ENST00000557608 FNBP4Q8N3X1 1017 aaPredicted RBP27.56■■■□□ 2
RGMA-212ENST00000557608 HAP1P54257 671 aaPredicted RBP27.55■■■□□ 2
RGMA-212ENST00000557608 ATAD2Q6PL18 1390 aa27.55■■■□□ 2
RGMA-212ENST00000557608 CABLES1Q8TDN4 633 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms