RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 SIRT1Q96EB6 747 aa28.54■■■□□ 2.16
HIF1A-211ENST00000557446 ARHGEF28Q8N1W1 1705 aaKnown RBP28.53■■■□□ 2.16
HIF1A-211ENST00000557446 COL16A1Q07092 1604 aaPredicted RBP28.53■■■□□ 2.16
HIF1A-211ENST00000557446 BRINP3Q76B58 766 aa28.52■■■□□ 2.16
HIF1A-211ENST00000557446 C1orf167Q5SNV9 1468 aa28.52■■■□□ 2.16
HIF1A-211ENST00000557446 FMN2Q9NZ56 1722 aa28.52■■■□□ 2.16
HIF1A-211ENST00000557446 NHSL1Q5SYE7 1610 aa28.51■■■□□ 2.15
HIF1A-211ENST00000557446 PRAM1Q96QH2 718 aa28.5■■■□□ 2.15
HIF1A-211ENST00000557446 TRAK1Q9UPV9 953 aa28.5■■■□□ 2.15
HIF1A-211ENST00000557446 MED1Q15648 1581 aaPredicted RBP28.48■■■□□ 2.15
HIF1A-211ENST00000557446 TRPM1Q7Z4N2 1603 aa28.47■■■□□ 2.15
HIF1A-211ENST00000557446 ADGRB2O60241 1585 aa28.46■■■□□ 2.15
HIF1A-211ENST00000557446 SAFB2Q14151 953 aaKnown RBP eCLIP28.46■■■□□ 2.15
HIF1A-211ENST00000557446 POGKQ9P215 609 aa28.46■■■□□ 2.15
HIF1A-211ENST00000557446 TONSLQ96HA7 1378 aa28.44■■■□□ 2.14
HIF1A-211ENST00000557446 NBPF1Q3BBV0 1214 aa28.41■■■□□ 2.14
HIF1A-211ENST00000557446 RGPD8O14715 1765 aaPredicted RBP28.39■■■□□ 2.14
HIF1A-211ENST00000557446 DISP3Q9P2K9 1392 aa28.39■■■□□ 2.14
HIF1A-211ENST00000557446 ORAI2Q96SN7 254 aa28.39■■■□□ 2.14
HIF1A-211ENST00000557446 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
HIF1A-211ENST00000557446 SHPRHQ149N8 1683 aa28.38■■■□□ 2.13
HIF1A-211ENST00000557446 JCADQ9P266 1359 aa28.37■■■□□ 2.13
HIF1A-211ENST00000557446 KIF1AQ12756 1690 aa28.36■■■□□ 2.13
HIF1A-211ENST00000557446 DDX17Q92841 729 aaKnown RBP28.35■■■□□ 2.13
HIF1A-211ENST00000557446 MINK1Q8N4C8 1332 aaPredicted RBP28.35■■■□□ 2.13
HIF1A-211ENST00000557446 USP32Q8NFA0 1604 aa28.34■■■□□ 2.13
HIF1A-211ENST00000557446 ESCO1Q5FWF5 840 aa28.34■■■□□ 2.13
HIF1A-211ENST00000557446 HIRIP3Q9BW71 556 aaPredicted RBP28.33■■■□□ 2.13
HIF1A-211ENST00000557446 ROCK2O75116 1388 aaKnown RBP28.32■■■□□ 2.12
HIF1A-211ENST00000557446 NBPF8Q3BBV2 869 aa28.31■■■□□ 2.12
HIF1A-211ENST00000557446 QRICH2Q9H0J4 1663 aa28.31■■■□□ 2.12
HIF1A-211ENST00000557446 ANKARQ7Z5J8 1434 aa28.3■■■□□ 2.12
HIF1A-211ENST00000557446 TULP4Q9NRJ4 1543 aa28.29■■■□□ 2.12
HIF1A-211ENST00000557446 EIF3AQ14152 1382 aaKnown RBP28.28■■■□□ 2.12
HIF1A-211ENST00000557446 SOS2Q07890 1332 aaPredicted RBP28.26■■■□□ 2.11
HIF1A-211ENST00000557446 NPHP3Q7Z494 1330 aa28.26■■■□□ 2.11
HIF1A-211ENST00000557446 CLSPNQ9HAW4 1339 aa28.26■■■□□ 2.11
HIF1A-211ENST00000557446 RALGAPBQ86X10 1494 aa28.26■■■□□ 2.11
HIF1A-211ENST00000557446 WASLO00401 505 aaPredicted RBP28.25■■■□□ 2.11
HIF1A-211ENST00000557446 ITSN1Q15811 1721 aa28.24■■■□□ 2.11
HIF1A-211ENST00000557446 PXDNQ92626 1479 aa28.24■■■□□ 2.11
HIF1A-211ENST00000557446 LRRC59Q96AG4 307 aaKnown RBP28.24■■■□□ 2.11
HIF1A-211ENST00000557446 GPRASP1Q5JY77 1395 aa28.24■■■□□ 2.11
HIF1A-211ENST00000557446 SPATA31A6Q5VVP1 1343 aa28.23■■■□□ 2.11
HIF1A-211ENST00000557446 CENPJQ9HC77 1338 aaPredicted RBP28.23■■■□□ 2.11
HIF1A-211ENST00000557446 LRP6O75581 1613 aa28.22■■■□□ 2.11
HIF1A-211ENST00000557446 FOXO3O43524 673 aa28.22■■■□□ 2.11
HIF1A-211ENST00000557446 PHF23Q9BUL5 403 aaPredicted RBP28.22■■■□□ 2.11
HIF1A-211ENST00000557446 PHF8Q9UPP1 1060 aa28.21■■■□□ 2.11
HIF1A-211ENST00000557446 PNPLA6Q8IY17 1366 aa28.21■■■□□ 2.11
HIF1A-211ENST00000557446 ATP7BP35670 1465 aa28.21■■■□□ 2.11
HIF1A-211ENST00000557446 PRR36Q9H6K5 1346 aa28.2■■■□□ 2.11
HIF1A-211ENST00000557446 XPCQ01831 940 aaPredicted RBP28.19■■■□□ 2.1
HIF1A-211ENST00000557446 TOPAZ1Q8N9V7 1692 aa28.18■■■□□ 2.1
HIF1A-211ENST00000557446 COL22A1Q8NFW1 1626 aaPredicted RBP28.17■■■□□ 2.1
HIF1A-211ENST00000557446 CCER1Q8TC90 406 aaPredicted RBP28.16■■■□□ 2.1
HIF1A-211ENST00000557446 CARD11Q9BXL7 1154 aa28.15■■■□□ 2.1
HIF1A-211ENST00000557446 PMFBP1Q8TBY8 1022 aa28.14■■■□□ 2.1
HIF1A-211ENST00000557446 CDK19Q9BWU1 502 aa28.14■■■□□ 2.1
HIF1A-211ENST00000557446 NUTM2BA6NNL0 878 aaPredicted RBP28.12■■■□□ 2.09
HIF1A-211ENST00000557446 NUTM2EB1AL46 878 aaPredicted RBP28.12■■■□□ 2.09
HIF1A-211ENST00000557446 NUTM2AQ8IVF1 878 aaPredicted RBP28.12■■■□□ 2.09
HIF1A-211ENST00000557446 KRT28Q7Z3Y7 464 aa28.1■■■□□ 2.09
HIF1A-211ENST00000557446 NUDT16Q96DE0 195 aaKnown RBP28.1■■■□□ 2.09
HIF1A-211ENST00000557446 TRPM3Q9HCF6 1732 aaPredicted RBP28.09■■■□□ 2.09
HIF1A-211ENST00000557446 MEX3CQ5U5Q3 659 aaKnown RBP28.09■■■□□ 2.09
HIF1A-211ENST00000557446 TIMELESSQ9UNS1 1208 aa28.08■■■□□ 2.09
HIF1A-211ENST00000557446 TNS3Q68CZ2 1445 aa28.08■■■□□ 2.09
HIF1A-211ENST00000557446 SRPK2P78362 688 aaKnown RBP28.07■■■□□ 2.08
HIF1A-211ENST00000557446 SPATA31A3Q5VYP0 1347 aa28.06■■■□□ 2.08
HIF1A-211ENST00000557446 SBNO1A3KN83 1393 aa28.05■■■□□ 2.08
HIF1A-211ENST00000557446 PSME1Q06323 249 aa28.05■■■□□ 2.08
HIF1A-211ENST00000557446 ILDR2Q71H61 639 aa28.05■■■□□ 2.08
HIF1A-211ENST00000557446 SBNO2Q9Y2G9 1366 aa28.03■■■□□ 2.08
HIF1A-211ENST00000557446 EVC2Q86UK5 1308 aa28.03■■■□□ 2.08
HIF1A-211ENST00000557446 NGDNQ8NEJ9 315 aaKnown RBP28.03■■■□□ 2.08
HIF1A-211ENST00000557446 CABP2Q9NPB3 220 aa28.03■■■□□ 2.08
HIF1A-211ENST00000557446 RGS17Q9UGC6 210 aaPredicted RBP28.03■■■□□ 2.08
HIF1A-211ENST00000557446 CCDC61Q9Y6R9 512 aa28.03■■■□□ 2.08
HIF1A-211ENST00000557446 MARF1Q9Y4F3 1742 aaKnown RBP28.02■■■□□ 2.08
HIF1A-211ENST00000557446 ALS2Q96Q42 1657 aa28.02■■■□□ 2.08
HIF1A-211ENST00000557446 ABCA3Q99758 1704 aa28.01■■■□□ 2.07
HIF1A-211ENST00000557446 PPIP5K1Q6PFW1 1433 aa28.01■■■□□ 2.07
HIF1A-211ENST00000557446 POLR3AO14802 1390 aaPredicted RBP27.99■■■□□ 2.07
HIF1A-211ENST00000557446 ARHGEF10O15013 1369 aa27.98■■■□□ 2.07
HIF1A-211ENST00000557446 ADAMTS2O95450 1211 aa27.97■■■□□ 2.07
HIF1A-211ENST00000557446 PLEKHG3A1L390 1219 aa27.96■■■□□ 2.07
HIF1A-211ENST00000557446 LMOD2Q6P5Q4 547 aa27.96■■■□□ 2.07
HIF1A-211ENST00000557446 ACEP12821 1306 aa27.95■■■□□ 2.07
HIF1A-211ENST00000557446 C8orf37Q96NL8 207 aa27.95■■■□□ 2.06
HIF1A-211ENST00000557446 USP47Q96K76 1375 aa27.92■■■□□ 2.06
HIF1A-211ENST00000557446 AFF2P51816 1311 aa27.92■■■□□ 2.06
HIF1A-211ENST00000557446 ATAD2Q6PL18 1390 aa27.91■■■□□ 2.06
HIF1A-211ENST00000557446 POTEAQ6S8J7 498 aa27.91■■■□□ 2.06
HIF1A-211ENST00000557446 CRYBG1Q9Y4K1 1723 aa27.91■■■□□ 2.06
HIF1A-211ENST00000557446 PAK3O75914 559 aaPredicted RBP27.9■■■□□ 2.06
HIF1A-211ENST00000557446 ZNF772Q68DY9 489 aaPredicted RBP27.9■■■□□ 2.06
HIF1A-211ENST00000557446 AKAP12Q02952 1782 aa27.89■■■□□ 2.06
HIF1A-211ENST00000557446 ST20-MTHFSA0A0A6YYL1 179 aa27.89■■■□□ 2.06
HIF1A-211ENST00000557446 PLEKHG5O94827 1062 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms