RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 LRRC59Q96AG4 307 aaKnown RBP30.66■■■□□ 2.5
FOXA1-205ENST00000557418 DDX17Q92841 729 aaKnown RBP30.65■■■□□ 2.5
FOXA1-205ENST00000557418 SIRT1Q96EB6 747 aa30.65■■■□□ 2.5
FOXA1-205ENST00000557418 STAC3Q96MF2 364 aa30.65■■■□□ 2.5
FOXA1-205ENST00000557418 ORAI2Q96SN7 254 aa30.65■■■□□ 2.5
FOXA1-205ENST00000557418 NHSL1Q5SYE7 1610 aa30.6■■■□□ 2.49
FOXA1-205ENST00000557418 MEX3CQ5U5Q3 659 aaKnown RBP30.6■■■□□ 2.49
FOXA1-205ENST00000557418 PLEKHH1Q9ULM0 1364 aa30.6■■■□□ 2.49
FOXA1-205ENST00000557418 KNDC1Q76NI1 1749 aa30.59■■■□□ 2.49
FOXA1-205ENST00000557418 LAMC1P11047 1609 aa30.58■■■□□ 2.49
FOXA1-205ENST00000557418 ESCO1Q5FWF5 840 aa30.58■■■□□ 2.49
FOXA1-205ENST00000557418 NUTM2BA6NNL0 878 aaPredicted RBP30.57■■■□□ 2.48
FOXA1-205ENST00000557418 NUTM2EB1AL46 878 aaPredicted RBP30.57■■■□□ 2.48
FOXA1-205ENST00000557418 NUTM2AQ8IVF1 878 aaPredicted RBP30.57■■■□□ 2.48
FOXA1-205ENST00000557418 SHPRHQ149N8 1683 aa30.57■■■□□ 2.48
FOXA1-205ENST00000557418 NUTM2FA1L443 756 aa30.56■■■□□ 2.48
FOXA1-205ENST00000557418 CDC42BPGQ6DT37 1551 aa30.54■■■□□ 2.48
FOXA1-205ENST00000557418 POTEAQ6S8J7 498 aa30.54■■■□□ 2.48
FOXA1-205ENST00000557418 POGKQ9P215 609 aa30.54■■■□□ 2.48
FOXA1-205ENST00000557418 PRAM1Q96QH2 718 aa30.53■■■□□ 2.48
FOXA1-205ENST00000557418 SOS2Q07890 1332 aaPredicted RBP30.51■■■□□ 2.48
FOXA1-205ENST00000557418 SAFB2Q14151 953 aaKnown RBP eCLIP30.51■■■□□ 2.47
FOXA1-205ENST00000557418 TRAK1Q9UPV9 953 aa30.5■■■□□ 2.47
FOXA1-205ENST00000557418 LRP6O75581 1613 aa30.5■■■□□ 2.47
FOXA1-205ENST00000557418 NPHP3Q7Z494 1330 aa30.47■■■□□ 2.47
FOXA1-205ENST00000557418 FOXO3O43524 673 aa30.47■■■□□ 2.47
FOXA1-205ENST00000557418 CCER1Q8TC90 406 aaPredicted RBP30.47■■■□□ 2.47
FOXA1-205ENST00000557418 PNPLA6Q8IY17 1366 aa30.46■■■□□ 2.47
FOXA1-205ENST00000557418 ZNF772Q68DY9 489 aaPredicted RBP30.45■■■□□ 2.47
FOXA1-205ENST00000557418 CLSPNQ9HAW4 1339 aa30.45■■■□□ 2.46
FOXA1-205ENST00000557418 ADGRB1O14514 1584 aa30.44■■■□□ 2.46
FOXA1-205ENST00000557418 DLC1Q96QB1 1528 aa30.43■■■□□ 2.46
FOXA1-205ENST00000557418 FMN2Q9NZ56 1722 aa30.41■■■□□ 2.46
FOXA1-205ENST00000557418 XPCQ01831 940 aaPredicted RBP30.4■■■□□ 2.46
FOXA1-205ENST00000557418 SIN3AQ96ST3 1273 aa30.4■■■□□ 2.46
FOXA1-205ENST00000557418 ADAMTS2O95450 1211 aa30.36■■■□□ 2.45
FOXA1-205ENST00000557418 C8orf37Q96NL8 207 aa30.36■■■□□ 2.45
FOXA1-205ENST00000557418 PHF8Q9UPP1 1060 aa30.36■■■□□ 2.45
FOXA1-205ENST00000557418 HIRIP3Q9BW71 556 aaPredicted RBP30.35■■■□□ 2.45
FOXA1-205ENST00000557418 MINK1Q8N4C8 1332 aaPredicted RBP30.35■■■□□ 2.45
FOXA1-205ENST00000557418 RGPD8O14715 1765 aaPredicted RBP30.34■■■□□ 2.45
FOXA1-205ENST00000557418 AFF2P51816 1311 aa30.34■■■□□ 2.45
FOXA1-205ENST00000557418 KRT28Q7Z3Y7 464 aa30.34■■■□□ 2.45
FOXA1-205ENST00000557418 PXDNQ92626 1479 aa30.32■■■□□ 2.44
FOXA1-205ENST00000557418 NGLY1Q96IV0 654 aa30.32■■■□□ 2.44
FOXA1-205ENST00000557418 PSME1Q06323 249 aa30.3■■■□□ 2.44
FOXA1-205ENST00000557418 NEUROD1Q13562 356 aa30.3■■■□□ 2.44
FOXA1-205ENST00000557418 KIF1AQ12756 1690 aa30.3■■■□□ 2.44
FOXA1-205ENST00000557418 L3MBTL2Q969R5 705 aa30.29■■■□□ 2.44
FOXA1-205ENST00000557418 WASLO00401 505 aaPredicted RBP30.28■■■□□ 2.44
FOXA1-205ENST00000557418 RXRBP28702 533 aa30.28■■■□□ 2.44
FOXA1-205ENST00000557418 NBPF1Q3BBV0 1214 aa30.28■■■□□ 2.44
FOXA1-205ENST00000557418 PMFBP1Q8TBY8 1022 aa30.27■■■□□ 2.44
FOXA1-205ENST00000557418 SPATA31A3Q5VYP0 1347 aa30.26■■■□□ 2.44
FOXA1-205ENST00000557418 ANKARQ7Z5J8 1434 aa30.26■■■□□ 2.43
FOXA1-205ENST00000557418 KIAA1210Q9ULL0 1709 aa30.25■■■□□ 2.43
FOXA1-205ENST00000557418 EIF3AQ14152 1382 aaKnown RBP30.25■■■□□ 2.43
FOXA1-205ENST00000557418 ADGRB2O60241 1585 aa30.24■■■□□ 2.43
FOXA1-205ENST00000557418 QTRT2Q9H974 415 aaKnown RBP30.24■■■□□ 2.43
FOXA1-205ENST00000557418 COL22A1Q8NFW1 1626 aaPredicted RBP30.23■■■□□ 2.43
FOXA1-205ENST00000557418 ARHGEF28Q8N1W1 1705 aaKnown RBP30.21■■■□□ 2.43
FOXA1-205ENST00000557418 PRR36Q9H6K5 1346 aa30.19■■■□□ 2.42
FOXA1-205ENST00000557418 USP32Q8NFA0 1604 aa30.18■■■□□ 2.42
FOXA1-205ENST00000557418 LMOD2Q6P5Q4 547 aa30.18■■■□□ 2.42
FOXA1-205ENST00000557418 USP21Q9UK80 565 aa30.18■■■□□ 2.42
FOXA1-205ENST00000557418 FNBP4Q8N3X1 1017 aaPredicted RBP30.17■■■□□ 2.42
FOXA1-205ENST00000557418 RBM6P78332 1123 aaKnown RBP30.16■■■□□ 2.42
FOXA1-205ENST00000557418 CDK19Q9BWU1 502 aa30.16■■■□□ 2.42
FOXA1-205ENST00000557418 TULP4Q9NRJ4 1543 aa30.16■■■□□ 2.42
FOXA1-205ENST00000557418 SBNO1A3KN83 1393 aa30.15■■■□□ 2.42
FOXA1-205ENST00000557418 NGDNQ8NEJ9 315 aaKnown RBP30.15■■■□□ 2.42
FOXA1-205ENST00000557418 NUDT16Q96DE0 195 aaKnown RBP30.15■■■□□ 2.42
FOXA1-205ENST00000557418 HAP1P54257 671 aaPredicted RBP30.14■■■□□ 2.42
FOXA1-205ENST00000557418 GPRASP1Q5JY77 1395 aa30.14■■■□□ 2.41
FOXA1-205ENST00000557418 TNS3Q68CZ2 1445 aa30.13■■■□□ 2.41
FOXA1-205ENST00000557418 PLEKHG5O94827 1062 aa30.12■■■□□ 2.41
FOXA1-205ENST00000557418 TRPC5Q9UL62 973 aaPredicted RBP30.12■■■□□ 2.41
FOXA1-205ENST00000557418 TONSLQ96HA7 1378 aa30.12■■■□□ 2.41
FOXA1-205ENST00000557418 ARHGEF10O15013 1369 aa30.09■■■□□ 2.41
FOXA1-205ENST00000557418 CABLES1Q8TDN4 633 aa30.09■■■□□ 2.41
FOXA1-205ENST00000557418 CENPJQ9HC77 1338 aaPredicted RBP30.09■■■□□ 2.41
FOXA1-205ENST00000557418 TIMELESSQ9UNS1 1208 aa30.09■■■□□ 2.41
FOXA1-205ENST00000557418 MARF1Q9Y4F3 1742 aaKnown RBP30.08■■■□□ 2.41
FOXA1-205ENST00000557418 CDK12Q9NYV4 1490 aaPredicted RBP30.07■■■□□ 2.4
FOXA1-205ENST00000557418 CCDC61Q9Y6R9 512 aa30.06■■■□□ 2.4
FOXA1-205ENST00000557418 PAK3O75914 559 aaPredicted RBP30.05■■■□□ 2.4
FOXA1-205ENST00000557418 SRPK2P78362 688 aaKnown RBP30.03■■■□□ 2.4
FOXA1-205ENST00000557418 ATP7BP35670 1465 aa30.02■■■□□ 2.4
FOXA1-205ENST00000557418 ITSN1Q15811 1721 aa30.02■■■□□ 2.4
FOXA1-205ENST00000557418 BCL9LQ86UU0 1499 aa30.01■■■□□ 2.4
FOXA1-205ENST00000557418 ROCK2O75116 1388 aaKnown RBP30.01■■■□□ 2.39
FOXA1-205ENST00000557418 TRPM1Q7Z4N2 1603 aa30■■■□□ 2.39
FOXA1-205ENST00000557418 ATRNO75882 1429 aa29.99■■■□□ 2.39
FOXA1-205ENST00000557418 PLEKHG3A1L390 1219 aa29.99■■■□□ 2.39
FOXA1-205ENST00000557418 NBPF8Q3BBV2 869 aa29.99■■■□□ 2.39
FOXA1-205ENST00000557418 UNC5CLQ8IV45 518 aa29.99■■■□□ 2.39
FOXA1-205ENST00000557418 CABP2Q9NPB3 220 aa29.98■■■□□ 2.39
FOXA1-205ENST00000557418 TRPM3Q9HCF6 1732 aaPredicted RBP29.98■■■□□ 2.39
FOXA1-205ENST00000557418 ACEP12821 1306 aa29.97■■■□□ 2.39
FOXA1-205ENST00000557418 GJD4Q96KN9 370 aaPredicted RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms