RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 TECPR2O15040 1411 aa16.09■□□□□ 0.17
HNRNPC-230ENST00000557201 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
HNRNPC-230ENST00000557201 RBM6P78332 1123 aaKnown RBP16.08■□□□□ 0.16
HNRNPC-230ENST00000557201 COL22A1Q8NFW1 1626 aaPredicted RBP16.07■□□□□ 0.16
HNRNPC-230ENST00000557201 CCDC144AA2RUR9 1427 aa16.07■□□□□ 0.16
HNRNPC-230ENST00000557201 ADAMTS2O95450 1211 aa16.06■□□□□ 0.16
HNRNPC-230ENST00000557201 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
HNRNPC-230ENST00000557201 PXDNQ92626 1479 aa16.05■□□□□ 0.16
HNRNPC-230ENST00000557201 LRPPRCP42704 1394 aaKnown RBP16.05■□□□□ 0.16
HNRNPC-230ENST00000557201 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
HNRNPC-230ENST00000557201 ANKRD30BQ9BXX2 1392 aa16.05■□□□□ 0.16
HNRNPC-230ENST00000557201 FNBP4Q8N3X1 1017 aaPredicted RBP16.05■□□□□ 0.16
HNRNPC-230ENST00000557201 NGLY1Q96IV0 654 aa16.05■□□□□ 0.16
HNRNPC-230ENST00000557201 MPHOSPH9Q99550 1183 aa16.05■□□□□ 0.16
HNRNPC-230ENST00000557201 MYOM2P54296 1465 aa16.05■□□□□ 0.16
HNRNPC-230ENST00000557201 PIK3C2GO75747 1445 aa16.04■□□□□ 0.16
HNRNPC-230ENST00000557201 RGL3Q3MIN7 710 aa16.03■□□□□ 0.16
HNRNPC-230ENST00000557201 WAPLQ7Z5K2 1190 aa16.03■□□□□ 0.16
HNRNPC-230ENST00000557201 NPHP3Q7Z494 1330 aa16.03■□□□□ 0.16
HNRNPC-230ENST00000557201 ESCO1Q5FWF5 840 aa16.02■□□□□ 0.16
HNRNPC-230ENST00000557201 PLEKHH1Q9ULM0 1364 aa16.02■□□□□ 0.15
HNRNPC-230ENST00000557201 KNDC1Q76NI1 1749 aa16.02■□□□□ 0.15
HNRNPC-230ENST00000557201 USP21Q9UK80 565 aa16.01■□□□□ 0.15
HNRNPC-230ENST00000557201 ATRNO75882 1429 aa16.01■□□□□ 0.15
HNRNPC-230ENST00000557201 TMEM132EQ6IEE7 984 aa16■□□□□ 0.15
HNRNPC-230ENST00000557201 POTEDQ86YR6 584 aa16■□□□□ 0.15
HNRNPC-230ENST00000557201 STK26Q9P289 416 aa16■□□□□ 0.15
HNRNPC-230ENST00000557201 FOXO3O43524 673 aa16■□□□□ 0.15
HNRNPC-230ENST00000557201 TRPC5Q9UL62 973 aaPredicted RBP16■□□□□ 0.15
HNRNPC-230ENST00000557201 BCL9LQ86UU0 1499 aa15.99■□□□□ 0.15
HNRNPC-230ENST00000557201 NRXN1Q9ULB1 1477 aa15.99■□□□□ 0.15
HNRNPC-230ENST00000557201 YTHDC2Q9H6S0 1430 aaKnown RBP15.99■□□□□ 0.15
HNRNPC-230ENST00000557201 SIRT1Q96EB6 747 aa15.99■□□□□ 0.15
HNRNPC-230ENST00000557201 XPCQ01831 940 aaPredicted RBP15.98■□□□□ 0.15
HNRNPC-230ENST00000557201 C14orf93Q9H972 538 aaKnown RBP15.98■□□□□ 0.15
HNRNPC-230ENST00000557201 FMN2Q9NZ56 1722 aa15.97■□□□□ 0.15
HNRNPC-230ENST00000557201 NUTM2FA1L443 756 aa15.96■□□□□ 0.15
HNRNPC-230ENST00000557201 MARF1Q9Y4F3 1742 aaKnown RBP15.96■□□□□ 0.14
HNRNPC-230ENST00000557201 ATAD2Q6PL18 1390 aa15.95■□□□□ 0.14
HNRNPC-230ENST00000557201 SPATA31A3Q5VYP0 1347 aa15.95■□□□□ 0.14
HNRNPC-230ENST00000557201 ACIN1Q9UKV3 1341 aaKnown RBP15.94■□□□□ 0.14
HNRNPC-230ENST00000557201 KIF1AQ12756 1690 aa15.93■□□□□ 0.14
HNRNPC-230ENST00000557201 CFAP70Q5T0N1 1121 aa15.92■□□□□ 0.14
HNRNPC-230ENST00000557201 SLIT2O94813 1529 aa15.92■□□□□ 0.14
HNRNPC-230ENST00000557201 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.91■□□□□ 0.14
HNRNPC-230ENST00000557201 EP400Q96L91 3159 aa15.9■□□□□ 0.14
HNRNPC-230ENST00000557201 KRT28Q7Z3Y7 464 aa15.9■□□□□ 0.14
HNRNPC-230ENST00000557201 GJD4Q96KN9 370 aaPredicted RBP15.9■□□□□ 0.14
HNRNPC-230ENST00000557201 DHX57Q6P158 1386 aaKnown RBP15.9■□□□□ 0.14
HNRNPC-230ENST00000557201 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
HNRNPC-230ENST00000557201 UNC5CLQ8IV45 518 aa15.88■□□□□ 0.13
HNRNPC-230ENST00000557201 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
HNRNPC-230ENST00000557201 USP32Q8NFA0 1604 aa15.88■□□□□ 0.13
HNRNPC-230ENST00000557201 TNS3Q68CZ2 1445 aa15.88■□□□□ 0.13
HNRNPC-230ENST00000557201 RGPD8O14715 1765 aaPredicted RBP15.88■□□□□ 0.13
HNRNPC-230ENST00000557201 ADGRB1O14514 1584 aa15.88■□□□□ 0.13
HNRNPC-230ENST00000557201 GLI3P10071 1580 aa15.88■□□□□ 0.13
HNRNPC-230ENST00000557201 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
HNRNPC-230ENST00000557201 RALGAPBQ86X10 1494 aa15.87■□□□□ 0.13
HNRNPC-230ENST00000557201 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
HNRNPC-230ENST00000557201 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
HNRNPC-230ENST00000557201 ADGRB2O60241 1585 aa15.85■□□□□ 0.13
HNRNPC-230ENST00000557201 SRCAPQ6ZRS2 3230 aa15.85■□□□□ 0.13
HNRNPC-230ENST00000557201 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
HNRNPC-230ENST00000557201 PSME1Q06323 249 aa15.84■□□□□ 0.13
HNRNPC-230ENST00000557201 CCDC125Q86Z20 511 aa15.84■□□□□ 0.13
HNRNPC-230ENST00000557201 SAFB2Q14151 953 aaKnown RBP eCLIP15.83■□□□□ 0.12
HNRNPC-230ENST00000557201 CABLES1Q8TDN4 633 aa15.83■□□□□ 0.12
HNRNPC-230ENST00000557201 ABCA3Q99758 1704 aa15.82■□□□□ 0.12
HNRNPC-230ENST00000557201 ARHGEF10O15013 1369 aa15.81■□□□□ 0.12
HNRNPC-230ENST00000557201 ONECUT3O60422 494 aaPredicted RBP15.81■□□□□ 0.12
HNRNPC-230ENST00000557201 VPS72Q15906 364 aa15.81■□□□□ 0.12
HNRNPC-230ENST00000557201 POGKQ9P215 609 aa15.8■□□□□ 0.12
HNRNPC-230ENST00000557201 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
HNRNPC-230ENST00000557201 NWD2Q9ULI1 1742 aa15.8■□□□□ 0.12
HNRNPC-230ENST00000557201 PRR36Q9H6K5 1346 aa15.79■□□□□ 0.12
HNRNPC-230ENST00000557201 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
HNRNPC-230ENST00000557201 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
HNRNPC-230ENST00000557201 PLCH1Q4KWH8 1693 aa15.79■□□□□ 0.12
HNRNPC-230ENST00000557201 FAM83GA6ND36 823 aa15.78■□□□□ 0.12
HNRNPC-230ENST00000557201 TRAK1Q9UPV9 953 aa15.78■□□□□ 0.12
HNRNPC-230ENST00000557201 BRWD3Q6RI45 1802 aa15.78■□□□□ 0.12
HNRNPC-230ENST00000557201 BLMP54132 1417 aaPredicted RBP15.78■□□□□ 0.12
HNRNPC-230ENST00000557201 SEPT12Q8IYM1 358 aa15.77■□□□□ 0.12
HNRNPC-230ENST00000557201 HIRIP3Q9BW71 556 aaPredicted RBP15.77■□□□□ 0.12
HNRNPC-230ENST00000557201 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
HNRNPC-230ENST00000557201 TULP4Q9NRJ4 1543 aa15.77■□□□□ 0.11
HNRNPC-230ENST00000557201 ALS2Q96Q42 1657 aa15.77■□□□□ 0.11
HNRNPC-230ENST00000557201 STAC3Q96MF2 364 aa15.76■□□□□ 0.11
HNRNPC-230ENST00000557201 WASLO00401 505 aaPredicted RBP15.75■□□□□ 0.11
HNRNPC-230ENST00000557201 HRCP23327 699 aa15.75■□□□□ 0.11
HNRNPC-230ENST00000557201 HAP1P54257 671 aaPredicted RBP15.75■□□□□ 0.11
HNRNPC-230ENST00000557201 LMOD2Q6P5Q4 547 aa15.75■□□□□ 0.11
HNRNPC-230ENST00000557201 DCAF11Q8TEB1 546 aa15.75■□□□□ 0.11
HNRNPC-230ENST00000557201 MINK1Q8N4C8 1332 aaPredicted RBP15.75■□□□□ 0.11
HNRNPC-230ENST00000557201 KDM2AQ9Y2K7 1162 aa15.75■□□□□ 0.11
HNRNPC-230ENST00000557201 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
HNRNPC-230ENST00000557201 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
HNRNPC-230ENST00000557201 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
HNRNPC-230ENST00000557201 GPRASP1Q5JY77 1395 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms