RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ATRNO75882 1429 aa13.68□□□□□ -0.22
HNRNPC-227ENST00000556897 ESCO1Q5FWF5 840 aa13.68□□□□□ -0.22
HNRNPC-227ENST00000556897 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
HNRNPC-227ENST00000556897 RPGRIP1LQ68CZ1 1315 aa13.67□□□□□ -0.22
HNRNPC-227ENST00000556897 EP400Q96L91 3159 aa13.67□□□□□ -0.22
HNRNPC-227ENST00000556897 XPCQ01831 940 aaPredicted RBP13.67□□□□□ -0.22
HNRNPC-227ENST00000556897 COL22A1Q8NFW1 1626 aaPredicted RBP13.67□□□□□ -0.22
HNRNPC-227ENST00000556897 MYOM2P54296 1465 aa13.67□□□□□ -0.22
HNRNPC-227ENST00000556897 NPHP3Q7Z494 1330 aa13.66□□□□□ -0.22
HNRNPC-227ENST00000556897 FOXO3O43524 673 aa13.66□□□□□ -0.22
HNRNPC-227ENST00000556897 BCL9LQ86UU0 1499 aa13.65□□□□□ -0.22
HNRNPC-227ENST00000556897 PXDNQ92626 1479 aa13.65□□□□□ -0.22
HNRNPC-227ENST00000556897 RRBP1Q9P2E9 1410 aaKnown RBP13.64□□□□□ -0.23
HNRNPC-227ENST00000556897 PPLO60437 1756 aa13.64□□□□□ -0.23
HNRNPC-227ENST00000556897 CDC42BPGQ6DT37 1551 aa13.64□□□□□ -0.23
HNRNPC-227ENST00000556897 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
HNRNPC-227ENST00000556897 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
HNRNPC-227ENST00000556897 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
HNRNPC-227ENST00000556897 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
HNRNPC-227ENST00000556897 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
HNRNPC-227ENST00000556897 STK26Q9P289 416 aa13.62□□□□□ -0.23
HNRNPC-227ENST00000556897 ADGRF5Q8IZF2 1346 aa13.62□□□□□ -0.23
HNRNPC-227ENST00000556897 CCDC125Q86Z20 511 aa13.61□□□□□ -0.23
HNRNPC-227ENST00000556897 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-227ENST00000556897 MARF1Q9Y4F3 1742 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-227ENST00000556897 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
HNRNPC-227ENST00000556897 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.23
HNRNPC-227ENST00000556897 TECPR2O15040 1411 aa13.58□□□□□ -0.24
HNRNPC-227ENST00000556897 TMEM132EQ6IEE7 984 aa13.58□□□□□ -0.24
HNRNPC-227ENST00000556897 UNC5CLQ8IV45 518 aa13.58□□□□□ -0.24
HNRNPC-227ENST00000556897 RALGAPBQ86X10 1494 aa13.57□□□□□ -0.24
HNRNPC-227ENST00000556897 SPATA31A3Q5VYP0 1347 aa13.57□□□□□ -0.24
HNRNPC-227ENST00000556897 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
HNRNPC-227ENST00000556897 CCDC144AA2RUR9 1427 aa13.56□□□□□ -0.24
HNRNPC-227ENST00000556897 SLIT2O94813 1529 aa13.56□□□□□ -0.24
HNRNPC-227ENST00000556897 GLI3P10071 1580 aa13.56□□□□□ -0.24
HNRNPC-227ENST00000556897 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-227ENST00000556897 SPATA31E1Q6ZUB1 1445 aa13.56□□□□□ -0.24
HNRNPC-227ENST00000556897 ANKRD30BQ9BXX2 1392 aa13.55□□□□□ -0.24
HNRNPC-227ENST00000556897 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-227ENST00000556897 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
HNRNPC-227ENST00000556897 KRT28Q7Z3Y7 464 aa13.54□□□□□ -0.24
HNRNPC-227ENST00000556897 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
HNRNPC-227ENST00000556897 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
HNRNPC-227ENST00000556897 DEFB132Q7Z7B7 95 aa13.53□□□□□ -0.24
HNRNPC-227ENST00000556897 SEPT12Q8IYM1 358 aa13.53□□□□□ -0.24
HNRNPC-227ENST00000556897 CABLES1Q8TDN4 633 aa13.53□□□□□ -0.24
HNRNPC-227ENST00000556897 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
HNRNPC-227ENST00000556897 YTHDC2Q9H6S0 1430 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-227ENST00000556897 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
HNRNPC-227ENST00000556897 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
HNRNPC-227ENST00000556897 KNDC1Q76NI1 1749 aa13.52□□□□□ -0.25
HNRNPC-227ENST00000556897 BRWD3Q6RI45 1802 aa13.51□□□□□ -0.25
HNRNPC-227ENST00000556897 IFT172Q9UG01 1749 aa13.51□□□□□ -0.25
HNRNPC-227ENST00000556897 MPHOSPH9Q99550 1183 aa13.51□□□□□ -0.25
HNRNPC-227ENST00000556897 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
HNRNPC-227ENST00000556897 TNS3Q68CZ2 1445 aa13.5□□□□□ -0.25
HNRNPC-227ENST00000556897 PSME1Q06323 249 aa13.5□□□□□ -0.25
HNRNPC-227ENST00000556897 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-227ENST00000556897 VPS72Q15906 364 aa13.5□□□□□ -0.25
HNRNPC-227ENST00000556897 CCDC9Q9Y3X0 531 aaKnown RBP13.5□□□□□ -0.25
HNRNPC-227ENST00000556897 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
HNRNPC-227ENST00000556897 RGPD8O14715 1765 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-227ENST00000556897 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
HNRNPC-227ENST00000556897 KRT27Q7Z3Y8 459 aa13.48□□□□□ -0.25
HNRNPC-227ENST00000556897 SIRT1Q96EB6 747 aa13.48□□□□□ -0.25
HNRNPC-227ENST00000556897 C14orf93Q9H972 538 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-227ENST00000556897 SBNO1A3KN83 1393 aa13.47□□□□□ -0.25
HNRNPC-227ENST00000556897 ONECUT3O60422 494 aaPredicted RBP13.47□□□□□ -0.25
HNRNPC-227ENST00000556897 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
HNRNPC-227ENST00000556897 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
HNRNPC-227ENST00000556897 FAM83GA6ND36 823 aa13.46□□□□□ -0.25
HNRNPC-227ENST00000556897 PRAM1Q96QH2 718 aa13.46□□□□□ -0.25
HNRNPC-227ENST00000556897 NRXN1Q9ULB1 1477 aa13.46□□□□□ -0.25
HNRNPC-227ENST00000556897 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
HNRNPC-227ENST00000556897 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
HNRNPC-227ENST00000556897 NWD2Q9ULI1 1742 aa13.45□□□□□ -0.26
HNRNPC-227ENST00000556897 A0A0G2JS52 829 aa13.45□□□□□ -0.26
HNRNPC-227ENST00000556897 MYT1Q01538 1121 aa13.45□□□□□ -0.26
HNRNPC-227ENST00000556897 PMFBP1Q8TBY8 1022 aa13.45□□□□□ -0.26
HNRNPC-227ENST00000556897 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
HNRNPC-227ENST00000556897 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-227ENST00000556897 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-227ENST00000556897 BTG4Q9NY30 223 aa13.42□□□□□ -0.26
HNRNPC-227ENST00000556897 POGKQ9P215 609 aa13.42□□□□□ -0.26
HNRNPC-227ENST00000556897 ANKARQ7Z5J8 1434 aa13.41□□□□□ -0.26
HNRNPC-227ENST00000556897 BAG6P46379 1132 aa13.41□□□□□ -0.26
HNRNPC-227ENST00000556897 LRP5O75197 1615 aa13.41□□□□□ -0.26
HNRNPC-227ENST00000556897 MSH5O43196 834 aa13.4□□□□□ -0.26
HNRNPC-227ENST00000556897 HIRIP3Q9BW71 556 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-227ENST00000556897 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
HNRNPC-227ENST00000556897 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
HNRNPC-227ENST00000556897 HRCP23327 699 aa13.39□□□□□ -0.27
HNRNPC-227ENST00000556897 FAM182BQ5T319 152 aa13.39□□□□□ -0.27
HNRNPC-227ENST00000556897 GPRASP1Q5JY77 1395 aa13.39□□□□□ -0.27
HNRNPC-227ENST00000556897 ADGRB2O60241 1585 aa13.38□□□□□ -0.27
HNRNPC-227ENST00000556897 KCNA4P22459 653 aa13.38□□□□□ -0.27
HNRNPC-227ENST00000556897 EN1Q05925 392 aaPredicted RBP13.38□□□□□ -0.27
HNRNPC-227ENST00000556897 TRAK1Q9UPV9 953 aa13.38□□□□□ -0.27
HNRNPC-227ENST00000556897 TRPM3Q9HCF6 1732 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms