RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 FOXD1Q16676 465 aa23.76■■□□□ 1.39
RCCD1-207ENST00000556774 MARF1Q9Y4F3 1742 aaKnown RBP23.75■■□□□ 1.39
RCCD1-207ENST00000556774 PXDNQ92626 1479 aa23.74■■□□□ 1.39
RCCD1-207ENST00000556774 KNDC1Q76NI1 1749 aa23.73■■□□□ 1.39
RCCD1-207ENST00000556774 MYOM2P54296 1465 aa23.73■■□□□ 1.39
RCCD1-207ENST00000556774 USP21Q9UK80 565 aa23.72■■□□□ 1.39
RCCD1-207ENST00000556774 ADGRF5Q8IZF2 1346 aa23.72■■□□□ 1.39
RCCD1-207ENST00000556774 CCDC144AA2RUR9 1427 aa23.72■■□□□ 1.39
RCCD1-207ENST00000556774 ESCO1Q5FWF5 840 aa23.7■■□□□ 1.38
RCCD1-207ENST00000556774 TECPR2O15040 1411 aa23.69■■□□□ 1.38
RCCD1-207ENST00000556774 ATRNO75882 1429 aa23.69■■□□□ 1.38
RCCD1-207ENST00000556774 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
RCCD1-207ENST00000556774 NPHP3Q7Z494 1330 aa23.69■■□□□ 1.38
RCCD1-207ENST00000556774 FMN2Q9NZ56 1722 aa23.68■■□□□ 1.38
RCCD1-207ENST00000556774 XPCQ01831 940 aaPredicted RBP23.68■■□□□ 1.38
RCCD1-207ENST00000556774 STK26Q9P289 416 aa23.68■■□□□ 1.38
RCCD1-207ENST00000556774 TRPC5Q9UL62 973 aaPredicted RBP23.68■■□□□ 1.38
RCCD1-207ENST00000556774 ATAD2Q6PL18 1390 aa23.67■■□□□ 1.38
RCCD1-207ENST00000556774 FNBP4Q8N3X1 1017 aaPredicted RBP23.67■■□□□ 1.38
RCCD1-207ENST00000556774 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
RCCD1-207ENST00000556774 RGL3Q3MIN7 710 aa23.66■■□□□ 1.38
RCCD1-207ENST00000556774 NUTM2FA1L443 756 aa23.65■■□□□ 1.38
RCCD1-207ENST00000556774 WAPLQ7Z5K2 1190 aa23.65■■□□□ 1.38
RCCD1-207ENST00000556774 ANKRD30BQ9BXX2 1392 aa23.65■■□□□ 1.38
RCCD1-207ENST00000556774 PLEKHH1Q9ULM0 1364 aa23.65■■□□□ 1.38
RCCD1-207ENST00000556774 KIF1AQ12756 1690 aa23.64■■□□□ 1.38
RCCD1-207ENST00000556774 EP400Q96L91 3159 aa23.64■■□□□ 1.38
RCCD1-207ENST00000556774 FOXO3O43524 673 aa23.64■■□□□ 1.37
RCCD1-207ENST00000556774 PIK3C2GO75747 1445 aa23.64■■□□□ 1.37
RCCD1-207ENST00000556774 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
RCCD1-207ENST00000556774 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.62■■□□□ 1.37
RCCD1-207ENST00000556774 RGPD8O14715 1765 aaPredicted RBP23.61■■□□□ 1.37
RCCD1-207ENST00000556774 TMEM132EQ6IEE7 984 aa23.61■■□□□ 1.37
RCCD1-207ENST00000556774 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
RCCD1-207ENST00000556774 YTHDC2Q9H6S0 1430 aaKnown RBP23.59■■□□□ 1.37
RCCD1-207ENST00000556774 MPHOSPH9Q99550 1183 aa23.59■■□□□ 1.37
RCCD1-207ENST00000556774 SRCAPQ6ZRS2 3230 aa23.58■■□□□ 1.37
RCCD1-207ENST00000556774 USP32Q8NFA0 1604 aa23.57■■□□□ 1.36
RCCD1-207ENST00000556774 GLI3P10071 1580 aa23.54■■□□□ 1.36
RCCD1-207ENST00000556774 ABCA3Q99758 1704 aa23.53■■□□□ 1.36
RCCD1-207ENST00000556774 SPATA31A3Q5VYP0 1347 aa23.53■■□□□ 1.36
RCCD1-207ENST00000556774 SLIT2O94813 1529 aa23.53■■□□□ 1.36
RCCD1-207ENST00000556774 RALGAPBQ86X10 1494 aa23.51■■□□□ 1.35
RCCD1-207ENST00000556774 NRXN1Q9ULB1 1477 aa23.51■■□□□ 1.35
RCCD1-207ENST00000556774 GJD4Q96KN9 370 aaPredicted RBP23.51■■□□□ 1.35
RCCD1-207ENST00000556774 BRWD3Q6RI45 1802 aa23.51■■□□□ 1.35
RCCD1-207ENST00000556774 PLCH1Q4KWH8 1693 aa23.51■■□□□ 1.35
RCCD1-207ENST00000556774 TNS3Q68CZ2 1445 aa23.49■■□□□ 1.35
RCCD1-207ENST00000556774 KRT28Q7Z3Y7 464 aa23.48■■□□□ 1.35
RCCD1-207ENST00000556774 UNC5CLQ8IV45 518 aa23.48■■□□□ 1.35
RCCD1-207ENST00000556774 C14orf93Q9H972 538 aaKnown RBP23.47■■□□□ 1.35
RCCD1-207ENST00000556774 CFAP70Q5T0N1 1121 aa23.46■■□□□ 1.35
RCCD1-207ENST00000556774 NWD2Q9ULI1 1742 aa23.46■■□□□ 1.35
RCCD1-207ENST00000556774 PHF8Q9UPP1 1060 aa23.45■■□□□ 1.34
RCCD1-207ENST00000556774 DHX57Q6P158 1386 aaKnown RBP23.44■■□□□ 1.34
RCCD1-207ENST00000556774 PLEKHG5O94827 1062 aa23.44■■□□□ 1.34
RCCD1-207ENST00000556774 SAFB2Q14151 953 aaKnown RBP eCLIP23.44■■□□□ 1.34
RCCD1-207ENST00000556774 SIRT1Q96EB6 747 aa23.44■■□□□ 1.34
RCCD1-207ENST00000556774 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
RCCD1-207ENST00000556774 ZRANB1Q9UGI0 708 aa23.43■■□□□ 1.34
RCCD1-207ENST00000556774 ADGRB2O60241 1585 aa23.43■■□□□ 1.34
RCCD1-207ENST00000556774 DLC1Q96QB1 1528 aa23.43■■□□□ 1.34
RCCD1-207ENST00000556774 CABLES1Q8TDN4 633 aa23.42■■□□□ 1.34
RCCD1-207ENST00000556774 PRAM1Q96QH2 718 aa23.42■■□□□ 1.34
RCCD1-207ENST00000556774 CCDC125Q86Z20 511 aa23.41■■□□□ 1.34
RCCD1-207ENST00000556774 SBNO1A3KN83 1393 aa23.4■■□□□ 1.34
RCCD1-207ENST00000556774 TRPM3Q9HCF6 1732 aaPredicted RBP23.4■■□□□ 1.34
RCCD1-207ENST00000556774 PSME1Q06323 249 aa23.4■■□□□ 1.34
RCCD1-207ENST00000556774 BLMP54132 1417 aaPredicted RBP23.39■■□□□ 1.33
RCCD1-207ENST00000556774 ADGRB1O14514 1584 aa23.39■■□□□ 1.33
RCCD1-207ENST00000556774 LMOD2Q6P5Q4 547 aa23.38■■□□□ 1.33
RCCD1-207ENST00000556774 ANKARQ7Z5J8 1434 aa23.38■■□□□ 1.33
RCCD1-207ENST00000556774 NRAPQ86VF7 1730 aa23.38■■□□□ 1.33
RCCD1-207ENST00000556774 ARHGEF10O15013 1369 aa23.38■■□□□ 1.33
RCCD1-207ENST00000556774 VPS72Q15906 364 aa23.36■■□□□ 1.33
RCCD1-207ENST00000556774 POGKQ9P215 609 aa23.36■■□□□ 1.33
RCCD1-207ENST00000556774 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
RCCD1-207ENST00000556774 SEPT12Q8IYM1 358 aa23.35■■□□□ 1.33
RCCD1-207ENST00000556774 PMFBP1Q8TBY8 1022 aa23.35■■□□□ 1.33
RCCD1-207ENST00000556774 CCDC9Q9Y3X0 531 aaKnown RBP23.34■■□□□ 1.33
RCCD1-207ENST00000556774 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.33
RCCD1-207ENST00000556774 RAB3GAP2Q9H2M9 1393 aa23.33■■□□□ 1.33
RCCD1-207ENST00000556774 CRYBG1Q9Y4K1 1723 aa23.31■■□□□ 1.32
RCCD1-207ENST00000556774 DEFB132Q7Z7B7 95 aa23.31■■□□□ 1.32
RCCD1-207ENST00000556774 HIRIP3Q9BW71 556 aaPredicted RBP23.31■■□□□ 1.32
RCCD1-207ENST00000556774 TULP4Q9NRJ4 1543 aa23.31■■□□□ 1.32
RCCD1-207ENST00000556774 COL14A1Q05707 1796 aaKnown RBP23.3■■□□□ 1.32
RCCD1-207ENST00000556774 FAM83GA6ND36 823 aa23.29■■□□□ 1.32
RCCD1-207ENST00000556774 TRAK1Q9UPV9 953 aa23.29■■□□□ 1.32
RCCD1-207ENST00000556774 MINK1Q8N4C8 1332 aaPredicted RBP23.29■■□□□ 1.32
RCCD1-207ENST00000556774 PRR36Q9H6K5 1346 aa23.28■■□□□ 1.32
RCCD1-207ENST00000556774 ARHGEF28Q8N1W1 1705 aaKnown RBP23.28■■□□□ 1.32
RCCD1-207ENST00000556774 SF3B2Q13435 895 aaKnown RBP23.27■■□□□ 1.32
RCCD1-207ENST00000556774 KRT27Q7Z3Y8 459 aa23.27■■□□□ 1.32
RCCD1-207ENST00000556774 EIF3AQ14152 1382 aaKnown RBP23.27■■□□□ 1.31
RCCD1-207ENST00000556774 A0A0G2JS52 829 aa23.26■■□□□ 1.31
RCCD1-207ENST00000556774 ONECUT3O60422 494 aaPredicted RBP23.26■■□□□ 1.31
RCCD1-207ENST00000556774 MYT1Q01538 1121 aa23.26■■□□□ 1.31
RCCD1-207ENST00000556774 GPRASP1Q5JY77 1395 aa23.26■■□□□ 1.31
RCCD1-207ENST00000556774 ITSN1Q15811 1721 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms