RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ESCO1Q5FWF5 840 aa17.94■□□□□ 0.46
ACTN1-221ENST00000556571 SRCAPQ6ZRS2 3230 aa17.93■□□□□ 0.46
ACTN1-221ENST00000556571 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
ACTN1-221ENST00000556571 ATRNO75882 1429 aa17.92■□□□□ 0.46
ACTN1-221ENST00000556571 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
ACTN1-221ENST00000556571 FOXO3O43524 673 aa17.9■□□□□ 0.46
ACTN1-221ENST00000556571 CCDC125Q86Z20 511 aa17.9■□□□□ 0.46
ACTN1-221ENST00000556571 MYOM2P54296 1465 aa17.89■□□□□ 0.45
ACTN1-221ENST00000556571 ZRANB1Q9UGI0 708 aa17.89■□□□□ 0.45
ACTN1-221ENST00000556571 LRPPRCP42704 1394 aaKnown RBP17.89■□□□□ 0.45
ACTN1-221ENST00000556571 COL22A1Q8NFW1 1626 aaPredicted RBP17.87■□□□□ 0.45
ACTN1-221ENST00000556571 GJD4Q96KN9 370 aaPredicted RBP17.87■□□□□ 0.45
ACTN1-221ENST00000556571 BCL9LQ86UU0 1499 aa17.87■□□□□ 0.45
ACTN1-221ENST00000556571 XPCQ01831 940 aaPredicted RBP17.86■□□□□ 0.45
ACTN1-221ENST00000556571 PXDNQ92626 1479 aa17.86■□□□□ 0.45
ACTN1-221ENST00000556571 CDC42BPGQ6DT37 1551 aa17.86■□□□□ 0.45
ACTN1-221ENST00000556571 WAPLQ7Z5K2 1190 aa17.85■□□□□ 0.45
ACTN1-221ENST00000556571 ADGRF5Q8IZF2 1346 aa17.85■□□□□ 0.45
ACTN1-221ENST00000556571 STK26Q9P289 416 aa17.85■□□□□ 0.45
ACTN1-221ENST00000556571 NUTM2FA1L443 756 aa17.83■□□□□ 0.44
ACTN1-221ENST00000556571 PPLO60437 1756 aa17.83■□□□□ 0.44
ACTN1-221ENST00000556571 TECPR2O15040 1411 aa17.82■□□□□ 0.44
ACTN1-221ENST00000556571 ABCC11Q96J66 1382 aa17.82■□□□□ 0.44
ACTN1-221ENST00000556571 RGL3Q3MIN7 710 aa17.82■□□□□ 0.44
ACTN1-221ENST00000556571 UNC5CLQ8IV45 518 aa17.82■□□□□ 0.44
ACTN1-221ENST00000556571 ANKRD30BQ9BXX2 1392 aa17.81■□□□□ 0.44
ACTN1-221ENST00000556571 CCDC144AA2RUR9 1427 aa17.81■□□□□ 0.44
ACTN1-221ENST00000556571 SPATA31A3Q5VYP0 1347 aa17.8■□□□□ 0.44
ACTN1-221ENST00000556571 EP400Q96L91 3159 aa17.8■□□□□ 0.44
ACTN1-221ENST00000556571 TMEM132EQ6IEE7 984 aa17.79■□□□□ 0.44
ACTN1-221ENST00000556571 KRT28Q7Z3Y7 464 aa17.78■□□□□ 0.44
ACTN1-221ENST00000556571 SIRT1Q96EB6 747 aa17.78■□□□□ 0.44
ACTN1-221ENST00000556571 PLEKHH1Q9ULM0 1364 aa17.78■□□□□ 0.44
ACTN1-221ENST00000556571 SPATA31E1Q6ZUB1 1445 aa17.77■□□□□ 0.44
ACTN1-221ENST00000556571 SLIT2O94813 1529 aa17.77■□□□□ 0.43
ACTN1-221ENST00000556571 RALGAPBQ86X10 1494 aa17.75■□□□□ 0.43
ACTN1-221ENST00000556571 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
ACTN1-221ENST00000556571 PSME1Q06323 249 aa17.75■□□□□ 0.43
ACTN1-221ENST00000556571 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
ACTN1-221ENST00000556571 MARF1Q9Y4F3 1742 aaKnown RBP17.75■□□□□ 0.43
ACTN1-221ENST00000556571 BLMP54132 1417 aaPredicted RBP17.74■□□□□ 0.43
ACTN1-221ENST00000556571 YTHDC2Q9H6S0 1430 aaKnown RBP17.74■□□□□ 0.43
ACTN1-221ENST00000556571 PIK3C2GO75747 1445 aa17.73■□□□□ 0.43
ACTN1-221ENST00000556571 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
ACTN1-221ENST00000556571 SF3B2Q13435 895 aaKnown RBP17.72■□□□□ 0.43
ACTN1-221ENST00000556571 VPS72Q15906 364 aa17.72■□□□□ 0.43
ACTN1-221ENST00000556571 SEPT12Q8IYM1 358 aa17.72■□□□□ 0.43
ACTN1-221ENST00000556571 C14orf93Q9H972 538 aaKnown RBP17.72■□□□□ 0.43
ACTN1-221ENST00000556571 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.72■□□□□ 0.43
ACTN1-221ENST00000556571 KIF1AQ12756 1690 aa17.71■□□□□ 0.42
ACTN1-221ENST00000556571 GLI3P10071 1580 aa17.7■□□□□ 0.42
ACTN1-221ENST00000556571 ONECUT3O60422 494 aaPredicted RBP17.7■□□□□ 0.42
ACTN1-221ENST00000556571 CABLES1Q8TDN4 633 aa17.7■□□□□ 0.42
ACTN1-221ENST00000556571 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
ACTN1-221ENST00000556571 KNDC1Q76NI1 1749 aa17.69■□□□□ 0.42
ACTN1-221ENST00000556571 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
ACTN1-221ENST00000556571 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
ACTN1-221ENST00000556571 DEFB132Q7Z7B7 95 aa17.69■□□□□ 0.42
ACTN1-221ENST00000556571 SBNO1A3KN83 1393 aa17.68■□□□□ 0.42
ACTN1-221ENST00000556571 LMOD2Q6P5Q4 547 aa17.68■□□□□ 0.42
ACTN1-221ENST00000556571 CCDC9Q9Y3X0 531 aaKnown RBP17.68■□□□□ 0.42
ACTN1-221ENST00000556571 USP32Q8NFA0 1604 aa17.68■□□□□ 0.42
ACTN1-221ENST00000556571 ARHGEF10O15013 1369 aa17.67■□□□□ 0.42
ACTN1-221ENST00000556571 CFAP70Q5T0N1 1121 aa17.67■□□□□ 0.42
ACTN1-221ENST00000556571 KRT27Q7Z3Y8 459 aa17.67■□□□□ 0.42
ACTN1-221ENST00000556571 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
ACTN1-221ENST00000556571 PLEKHG5O94827 1062 aa17.66■□□□□ 0.42
ACTN1-221ENST00000556571 PRAM1Q96QH2 718 aa17.66■□□□□ 0.42
ACTN1-221ENST00000556571 IFT172Q9UG01 1749 aa17.66■□□□□ 0.42
ACTN1-221ENST00000556571 FAM83GA6ND36 823 aa17.65■□□□□ 0.42
ACTN1-221ENST00000556571 NRXN1Q9ULB1 1477 aa17.64■□□□□ 0.41
ACTN1-221ENST00000556571 SAFB2Q14151 953 aaKnown RBP eCLIP17.64■□□□□ 0.41
ACTN1-221ENST00000556571 POGKQ9P215 609 aa17.64■□□□□ 0.41
ACTN1-221ENST00000556571 PMFBP1Q8TBY8 1022 aa17.62■□□□□ 0.41
ACTN1-221ENST00000556571 ANKARQ7Z5J8 1434 aa17.62■□□□□ 0.41
ACTN1-221ENST00000556571 A0A0G2JS52 829 aa17.61■□□□□ 0.41
ACTN1-221ENST00000556571 MYT1Q01538 1121 aa17.61■□□□□ 0.41
ACTN1-221ENST00000556571 BRWD3Q6RI45 1802 aa17.61■□□□□ 0.41
ACTN1-221ENST00000556571 BAG6P46379 1132 aa17.6■□□□□ 0.41
ACTN1-221ENST00000556571 NWD2Q9ULI1 1742 aa17.6■□□□□ 0.41
ACTN1-221ENST00000556571 BTG4Q9NY30 223 aa17.59■□□□□ 0.41
ACTN1-221ENST00000556571 GPRASP1Q5JY77 1395 aa17.58■□□□□ 0.4
ACTN1-221ENST00000556571 FAM98CQ17RN3 349 aaKnown RBP17.58■□□□□ 0.4
ACTN1-221ENST00000556571 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.4
ACTN1-221ENST00000556571 DLC1Q96QB1 1528 aa17.57■□□□□ 0.4
ACTN1-221ENST00000556571 PLCH1Q4KWH8 1693 aa17.57■□□□□ 0.4
ACTN1-221ENST00000556571 EIF3AQ14152 1382 aaKnown RBP17.55■□□□□ 0.4
ACTN1-221ENST00000556571 HIRIP3Q9BW71 556 aaPredicted RBP17.55■□□□□ 0.4
ACTN1-221ENST00000556571 TRAK1Q9UPV9 953 aa17.55■□□□□ 0.4
ACTN1-221ENST00000556571 PSDA5PKW4 1024 aaPredicted RBP17.54■□□□□ 0.4
ACTN1-221ENST00000556571 SPATA31A5Q5VU36 1347 aa17.53■□□□□ 0.4
ACTN1-221ENST00000556571 SPATA31A7Q8IWB4 1347 aa17.53■□□□□ 0.4
ACTN1-221ENST00000556571 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
ACTN1-221ENST00000556571 HRCP23327 699 aa17.53■□□□□ 0.4
ACTN1-221ENST00000556571 ABCA3Q99758 1704 aa17.52■□□□□ 0.4
ACTN1-221ENST00000556571 PRR36Q9H6K5 1346 aa17.52■□□□□ 0.4
ACTN1-221ENST00000556571 WASLO00401 505 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-221ENST00000556571 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
ACTN1-221ENST00000556571 ADGRB2O60241 1585 aa17.52■□□□□ 0.39
ACTN1-221ENST00000556571 EN1Q05925 392 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms