RNA–Protein interactions for RNA: ENST00000556530.1

PNN-205, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2 BASIC

Gene PNN, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-205ENST00000556530 FAM135BQ49AJ0 1406 aa28.16■■■□□ 2.1
PNN-205ENST00000556530 ADGRL3Q9HAR2 1447 aa28.15■■■□□ 2.1
PNN-205ENST00000556530 NALCNQ8IZF0 1738 aa28.15■■■□□ 2.1
PNN-205ENST00000556530 CARD11Q9BXL7 1154 aa28.14■■■□□ 2.1
PNN-205ENST00000556530 CADPS2Q86UW7 1296 aa28.12■■■□□ 2.09
PNN-205ENST00000556530 RALGAPBQ86X10 1494 aa28.12■■■□□ 2.09
PNN-205ENST00000556530 ARHGEF28Q8N1W1 1705 aaKnown RBP28.12■■■□□ 2.09
PNN-205ENST00000556530 MINK1Q8N4C8 1332 aaPredicted RBP28.1■■■□□ 2.09
PNN-205ENST00000556530 HIRIP3Q9BW71 556 aaPredicted RBP28.08■■■□□ 2.09
PNN-205ENST00000556530 SLAIN2Q9P270 581 aa28.08■■■□□ 2.09
PNN-205ENST00000556530 GPRASP1Q5JY77 1395 aa28.06■■■□□ 2.08
PNN-205ENST00000556530 DCCP43146 1447 aa28.04■■■□□ 2.08
PNN-205ENST00000556530 CENPJQ9HC77 1338 aaPredicted RBP28.04■■■□□ 2.08
PNN-205ENST00000556530 NUTM2FA1L443 756 aa28.04■■■□□ 2.08
PNN-205ENST00000556530 ILDR1Q86SU0 546 aaPredicted RBP28.03■■■□□ 2.08
PNN-205ENST00000556530 EIF3AQ14152 1382 aaKnown RBP28■■■□□ 2.07
PNN-205ENST00000556530 MST1RQ04912 1400 aa27.99■■■□□ 2.07
PNN-205ENST00000556530 CDC42BPGQ6DT37 1551 aa27.99■■■□□ 2.07
PNN-205ENST00000556530 QRICH2Q9H0J4 1663 aa27.97■■■□□ 2.07
PNN-205ENST00000556530 WASLO00401 505 aaPredicted RBP27.95■■■□□ 2.06
PNN-205ENST00000556530 ROBO1Q9Y6N7 1651 aa27.94■■■□□ 2.06
PNN-205ENST00000556530 C1orf167Q5SNV9 1468 aa27.94■■■□□ 2.06
PNN-205ENST00000556530 FMN2Q9NZ56 1722 aa27.93■■■□□ 2.06
PNN-205ENST00000556530 ADGRB2O60241 1585 aa27.92■■■□□ 2.06
PNN-205ENST00000556530 ESCO1Q5FWF5 840 aa27.92■■■□□ 2.06
PNN-205ENST00000556530 ORAI2Q96SN7 254 aa27.92■■■□□ 2.06
PNN-205ENST00000556530 CDK19Q9BWU1 502 aa27.92■■■□□ 2.06
PNN-205ENST00000556530 BRINP3Q76B58 766 aa27.91■■■□□ 2.06
PNN-205ENST00000556530 ST20-MTHFSA0A0A6YYL1 179 aa27.9■■■□□ 2.06
PNN-205ENST00000556530 USP47Q96K76 1375 aa27.89■■■□□ 2.06
PNN-205ENST00000556530 HSPA1LP34931 641 aa27.89■■■□□ 2.06
PNN-205ENST00000556530 RGPD8O14715 1765 aaPredicted RBP27.88■■■□□ 2.05
PNN-205ENST00000556530 SRPK2P78362 688 aaKnown RBP27.88■■■□□ 2.05
PNN-205ENST00000556530 CABP2Q9NPB3 220 aa27.85■■■□□ 2.05
PNN-205ENST00000556530 EVC2Q86UK5 1308 aa27.85■■■□□ 2.05
PNN-205ENST00000556530 DDX17Q92841 729 aaKnown RBP27.84■■■□□ 2.05
PNN-205ENST00000556530 NUDT16Q96DE0 195 aaKnown RBP27.83■■■□□ 2.05
PNN-205ENST00000556530 PRR36Q9H6K5 1346 aa27.83■■■□□ 2.05
PNN-205ENST00000556530 TULP4Q9NRJ4 1543 aa27.82■■■□□ 2.04
PNN-205ENST00000556530 USP32Q8NFA0 1604 aa27.81■■■□□ 2.04
PNN-205ENST00000556530 PMFBP1Q8TBY8 1022 aa27.81■■■□□ 2.04
PNN-205ENST00000556530 ANKARQ7Z5J8 1434 aa27.81■■■□□ 2.04
PNN-205ENST00000556530 PHF8Q9UPP1 1060 aa27.8■■■□□ 2.04
PNN-205ENST00000556530 PHLPP1O60346 1717 aa27.79■■■□□ 2.04
PNN-205ENST00000556530 EIF4G2P78344 907 aaKnown RBP eCLIP27.79■■■□□ 2.04
PNN-205ENST00000556530 FOXO3O43524 673 aa27.78■■■□□ 2.04
PNN-205ENST00000556530 HSPA5P11021 654 aaKnown RBP27.77■■■□□ 2.04
PNN-205ENST00000556530 TESK2Q96S53 571 aa27.77■■■□□ 2.04
PNN-205ENST00000556530 SBNO2Q9Y2G9 1366 aa27.76■■■□□ 2.03
PNN-205ENST00000556530 XPCQ01831 940 aaPredicted RBP27.76■■■□□ 2.03
PNN-205ENST00000556530 ATP7BP35670 1465 aa27.75■■■□□ 2.03
PNN-205ENST00000556530 CCDC61Q9Y6R9 512 aa27.74■■■□□ 2.03
PNN-205ENST00000556530 NHSL1Q5SYE7 1610 aa27.73■■■□□ 2.03
PNN-205ENST00000556530 AHDC1Q5TGY3 1603 aaPredicted RBP27.73■■■□□ 2.03
PNN-205ENST00000556530 KIF1AQ12756 1690 aa27.72■■■□□ 2.03
PNN-205ENST00000556530 NGDNQ8NEJ9 315 aaKnown RBP27.72■■■□□ 2.03
PNN-205ENST00000556530 ITSN1Q15811 1721 aa27.72■■■□□ 2.03
PNN-205ENST00000556530 NPHP3Q7Z494 1330 aa27.71■■■□□ 2.03
PNN-205ENST00000556530 SLC24A1O60721 1099 aa27.71■■■□□ 2.03
PNN-205ENST00000556530 TMF1P82094 1093 aa27.71■■■□□ 2.03
PNN-205ENST00000556530 PSME1Q06323 249 aa27.71■■■□□ 2.03
PNN-205ENST00000556530 PPIP5K1Q6PFW1 1433 aa27.69■■■□□ 2.02
PNN-205ENST00000556530 KRT28Q7Z3Y7 464 aa27.69■■■□□ 2.02
PNN-205ENST00000556530 CABP1Q9NZU7 370 aa27.69■■■□□ 2.02
PNN-205ENST00000556530 COL16A1Q07092 1604 aaPredicted RBP27.67■■■□□ 2.02
PNN-205ENST00000556530 DISP3Q9P2K9 1392 aa27.67■■■□□ 2.02
PNN-205ENST00000556530 TOPAZ1Q8N9V7 1692 aa27.66■■■□□ 2.02
PNN-205ENST00000556530 ZEB1P37275 1124 aaPredicted RBP27.66■■■□□ 2.02
PNN-205ENST00000556530 TMC1Q8TDI8 760 aa27.66■■■□□ 2.02
PNN-205ENST00000556530 SOS2Q07890 1332 aaPredicted RBP27.66■■■□□ 2.02
PNN-205ENST00000556530 ATAD2Q6PL18 1390 aa27.65■■■□□ 2.02
PNN-205ENST00000556530 PLEKHG3A1L390 1219 aa27.65■■■□□ 2.02
PNN-205ENST00000556530 LRRC59Q96AG4 307 aaKnown RBP27.65■■■□□ 2.02
PNN-205ENST00000556530 ACEP12821 1306 aa27.65■■■□□ 2.02
PNN-205ENST00000556530 POLR3GLQ9BT43 218 aa27.63■■■□□ 2.01
PNN-205ENST00000556530 PXDNQ92626 1479 aa27.62■■■□□ 2.01
PNN-205ENST00000556530 CDCA8Q53HL2 280 aa27.6■■■□□ 2.01
PNN-205ENST00000556530 LMOD2Q6P5Q4 547 aa27.6■■■□□ 2.01
PNN-205ENST00000556530 PUS7Q96PZ0 661 aaKnown RBP27.6■■■□□ 2.01
PNN-205ENST00000556530 JCADQ9P266 1359 aa27.6■■■□□ 2.01
PNN-205ENST00000556530 PAK3O75914 559 aaPredicted RBP27.59■■■□□ 2.01
PNN-205ENST00000556530 SLC12A5Q9H2X9 1139 aa27.58■■■□□ 2.01
PNN-205ENST00000556530 POLR3AO14802 1390 aaPredicted RBP27.57■■■□□ 2
PNN-205ENST00000556530 PLEKHG5O94827 1062 aa27.56■■■□□ 2
PNN-205ENST00000556530 SPATA31A3Q5VYP0 1347 aa27.54■■■□□ 2
PNN-205ENST00000556530 NUTM2BA6NNL0 878 aaPredicted RBP27.53■■■□□ 2
PNN-205ENST00000556530 NUTM2EB1AL46 878 aaPredicted RBP27.53■■■□□ 2
PNN-205ENST00000556530 NUTM2AQ8IVF1 878 aaPredicted RBP27.53■■■□□ 2
PNN-205ENST00000556530 SBNO1A3KN83 1393 aa27.52■■■□□ 2
PNN-205ENST00000556530 PNPLA6Q8IY17 1366 aa27.52■■■□□ 2
PNN-205ENST00000556530 C11orf95C9JLR9 678 aaPredicted RBP27.51■■□□□ 1.99
PNN-205ENST00000556530 HDGFL2Q7Z4V5 671 aaPredicted RBP27.51■■□□□ 1.99
PNN-205ENST00000556530 ZNF692Q9BU19 519 aaPredicted RBP27.51■■□□□ 1.99
PNN-205ENST00000556530 TNS3Q68CZ2 1445 aa27.5■■□□□ 1.99
PNN-205ENST00000556530 SHPRHQ149N8 1683 aa27.5■■□□□ 1.99
PNN-205ENST00000556530 TRPM3Q9HCF6 1732 aaPredicted RBP27.5■■□□□ 1.99
PNN-205ENST00000556530 TERF2IPQ9NYB0 399 aa27.49■■□□□ 1.99
PNN-205ENST00000556530 KTN1Q86UP2 1357 aaKnown RBP27.48■■□□□ 1.99
PNN-205ENST00000556530 AKAP12Q02952 1782 aa27.48■■□□□ 1.99
PNN-205ENST00000556530 NUTM2GQ5VZR2 741 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms