RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 ADAMTS2O95450 1211 aa18.74■□□□□ 0.59
APEX1-213ENST00000556296 ORAI2Q96SN7 254 aa18.74■□□□□ 0.59
APEX1-213ENST00000556296 CCDC144AA2RUR9 1427 aa18.74■□□□□ 0.59
APEX1-213ENST00000556296 SOS2Q07890 1332 aaPredicted RBP18.74■□□□□ 0.59
APEX1-213ENST00000556296 HRCP23327 699 aa18.73■□□□□ 0.59
APEX1-213ENST00000556296 NPHP3Q7Z494 1330 aa18.72■□□□□ 0.59
APEX1-213ENST00000556296 LRPPRCP42704 1394 aaKnown RBP18.71■□□□□ 0.59
APEX1-213ENST00000556296 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
APEX1-213ENST00000556296 ESCO1Q5FWF5 840 aa18.71■□□□□ 0.59
APEX1-213ENST00000556296 ANKRD30BQ9BXX2 1392 aa18.7■□□□□ 0.58
APEX1-213ENST00000556296 USP21Q9UK80 565 aa18.7■□□□□ 0.58
APEX1-213ENST00000556296 TRPC5Q9UL62 973 aaPredicted RBP18.7■□□□□ 0.58
APEX1-213ENST00000556296 ADGRF5Q8IZF2 1346 aa18.69■□□□□ 0.58
APEX1-213ENST00000556296 STK26Q9P289 416 aa18.68■□□□□ 0.58
APEX1-213ENST00000556296 LAMC1P11047 1609 aa18.67■□□□□ 0.58
APEX1-213ENST00000556296 FNBP4Q8N3X1 1017 aaPredicted RBP18.65■□□□□ 0.58
APEX1-213ENST00000556296 FOXO3O43524 673 aa18.64■□□□□ 0.57
APEX1-213ENST00000556296 TECPR2O15040 1411 aa18.64■□□□□ 0.57
APEX1-213ENST00000556296 PIK3C2GO75747 1445 aa18.64■□□□□ 0.57
APEX1-213ENST00000556296 KNDC1Q76NI1 1749 aa18.63■□□□□ 0.57
APEX1-213ENST00000556296 ABCC11Q96J66 1382 aa18.63■□□□□ 0.57
APEX1-213ENST00000556296 WAPLQ7Z5K2 1190 aa18.62■□□□□ 0.57
APEX1-213ENST00000556296 ATAD2Q6PL18 1390 aa18.62■□□□□ 0.57
APEX1-213ENST00000556296 CDC42BPGQ6DT37 1551 aa18.62■□□□□ 0.57
APEX1-213ENST00000556296 RGS12O14924 1447 aa18.61■□□□□ 0.57
APEX1-213ENST00000556296 SIRT1Q96EB6 747 aa18.61■□□□□ 0.57
APEX1-213ENST00000556296 NRXN1Q9ULB1 1477 aa18.59■□□□□ 0.57
APEX1-213ENST00000556296 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
APEX1-213ENST00000556296 TMEM132EQ6IEE7 984 aa18.59■□□□□ 0.57
APEX1-213ENST00000556296 PSME1Q06323 249 aa18.58■□□□□ 0.56
APEX1-213ENST00000556296 MYOM2P54296 1465 aa18.58■□□□□ 0.56
APEX1-213ENST00000556296 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
APEX1-213ENST00000556296 XPCQ01831 940 aaPredicted RBP18.57■□□□□ 0.56
APEX1-213ENST00000556296 HAP1P54257 671 aaPredicted RBP18.56■□□□□ 0.56
APEX1-213ENST00000556296 CCDC125Q86Z20 511 aa18.56■□□□□ 0.56
APEX1-213ENST00000556296 C14orf93Q9H972 538 aaKnown RBP18.56■□□□□ 0.56
APEX1-213ENST00000556296 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
APEX1-213ENST00000556296 KRT28Q7Z3Y7 464 aa18.54■□□□□ 0.56
APEX1-213ENST00000556296 GJD4Q96KN9 370 aaPredicted RBP18.54■□□□□ 0.56
APEX1-213ENST00000556296 ATRNO75882 1429 aa18.54■□□□□ 0.56
APEX1-213ENST00000556296 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
APEX1-213ENST00000556296 FMN2Q9NZ56 1722 aa18.53■□□□□ 0.56
APEX1-213ENST00000556296 PXDNQ92626 1479 aa18.52■□□□□ 0.56
APEX1-213ENST00000556296 SPATA31A3Q5VYP0 1347 aa18.52■□□□□ 0.56
APEX1-213ENST00000556296 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
APEX1-213ENST00000556296 POGKQ9P215 609 aa18.52■□□□□ 0.56
APEX1-213ENST00000556296 PHF8Q9UPP1 1060 aa18.52■□□□□ 0.56
APEX1-213ENST00000556296 COL22A1Q8NFW1 1626 aaPredicted RBP18.51■□□□□ 0.55
APEX1-213ENST00000556296 CFAP70Q5T0N1 1121 aa18.49■□□□□ 0.55
APEX1-213ENST00000556296 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
APEX1-213ENST00000556296 PRAM1Q96QH2 718 aa18.48■□□□□ 0.55
APEX1-213ENST00000556296 BCL9LQ86UU0 1499 aa18.47■□□□□ 0.55
APEX1-213ENST00000556296 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
APEX1-213ENST00000556296 STAC3Q96MF2 364 aa18.47■□□□□ 0.55
APEX1-213ENST00000556296 RGPD8O14715 1765 aaPredicted RBP18.47■□□□□ 0.55
APEX1-213ENST00000556296 ADGRB1O14514 1584 aa18.47■□□□□ 0.55
APEX1-213ENST00000556296 DLC1Q96QB1 1528 aa18.46■□□□□ 0.55
APEX1-213ENST00000556296 SAFB2Q14151 953 aaKnown RBP eCLIP18.46■□□□□ 0.55
APEX1-213ENST00000556296 KIF1AQ12756 1690 aa18.46■□□□□ 0.55
APEX1-213ENST00000556296 SBNO1A3KN83 1393 aa18.45■□□□□ 0.54
APEX1-213ENST00000556296 ARHGEF10O15013 1369 aa18.45■□□□□ 0.54
APEX1-213ENST00000556296 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
APEX1-213ENST00000556296 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
APEX1-213ENST00000556296 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
APEX1-213ENST00000556296 MARF1Q9Y4F3 1742 aaKnown RBP18.43■□□□□ 0.54
APEX1-213ENST00000556296 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
APEX1-213ENST00000556296 PLEKHG5O94827 1062 aa18.41■□□□□ 0.54
APEX1-213ENST00000556296 VPS72Q15906 364 aa18.41■□□□□ 0.54
APEX1-213ENST00000556296 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
APEX1-213ENST00000556296 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
APEX1-213ENST00000556296 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
APEX1-213ENST00000556296 SLIT2O94813 1529 aa18.4■□□□□ 0.54
APEX1-213ENST00000556296 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
APEX1-213ENST00000556296 TRAK1Q9UPV9 953 aa18.4■□□□□ 0.54
APEX1-213ENST00000556296 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.53
APEX1-213ENST00000556296 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
APEX1-213ENST00000556296 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.53
APEX1-213ENST00000556296 USP32Q8NFA0 1604 aa18.38■□□□□ 0.53
APEX1-213ENST00000556296 SEPT12Q8IYM1 358 aa18.38■□□□□ 0.53
APEX1-213ENST00000556296 CCER1Q8TC90 406 aaPredicted RBP18.38■□□□□ 0.53
APEX1-213ENST00000556296 DCAF11Q8TEB1 546 aa18.38■□□□□ 0.53
APEX1-213ENST00000556296 A0A0G2JS52 829 aa18.36■□□□□ 0.53
APEX1-213ENST00000556296 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
APEX1-213ENST00000556296 MYT1Q01538 1121 aa18.36■□□□□ 0.53
APEX1-213ENST00000556296 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
APEX1-213ENST00000556296 WASLO00401 505 aaPredicted RBP18.35■□□□□ 0.53
APEX1-213ENST00000556296 KRT27Q7Z3Y8 459 aa18.35■□□□□ 0.53
APEX1-213ENST00000556296 NGDNQ8NEJ9 315 aaKnown RBP18.35■□□□□ 0.53
APEX1-213ENST00000556296 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
APEX1-213ENST00000556296 MINK1Q8N4C8 1332 aaPredicted RBP18.34■□□□□ 0.53
APEX1-213ENST00000556296 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
APEX1-213ENST00000556296 ARHGEF28Q8N1W1 1705 aaKnown RBP18.33■□□□□ 0.52
APEX1-213ENST00000556296 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
APEX1-213ENST00000556296 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.32■□□□□ 0.52
APEX1-213ENST00000556296 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
APEX1-213ENST00000556296 BTG4Q9NY30 223 aa18.31■□□□□ 0.52
APEX1-213ENST00000556296 KIAA1210Q9ULL0 1709 aa18.31■□□□□ 0.52
APEX1-213ENST00000556296 ABCA3Q99758 1704 aa18.3■□□□□ 0.52
APEX1-213ENST00000556296 TRPM3Q9HCF6 1732 aaPredicted RBP18.29■□□□□ 0.52
APEX1-213ENST00000556296 TULP4Q9NRJ4 1543 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms