RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 PPP1R15BQ5SWA1 713 aa11.31□□□□□ -0.6
ATXN3-236ENST00000556220 THEMISQ8N1K5 641 aaPredicted RBP11.31□□□□□ -0.6
ATXN3-236ENST00000556220 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
ATXN3-236ENST00000556220 SAMD9LQ8IVG5 1584 aa11.31□□□□□ -0.6
ATXN3-236ENST00000556220 A2MP01023 1474 aa11.31□□□□□ -0.6
ATXN3-236ENST00000556220 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
ATXN3-236ENST00000556220 FBXO31Q5XUX0 539 aaPredicted RBP11.3□□□□□ -0.6
ATXN3-236ENST00000556220 POTEEQ6S8J3 1075 aa11.3□□□□□ -0.6
ATXN3-236ENST00000556220 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
ATXN3-236ENST00000556220 KIAA1107Q9UPP5 1409 aa11.28□□□□□ -0.6
ATXN3-236ENST00000556220 ITSN2Q9NZM3 1697 aa11.28□□□□□ -0.6
ATXN3-236ENST00000556220 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
ATXN3-236ENST00000556220 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
ATXN3-236ENST00000556220 TNRQ92752 1358 aa11.28□□□□□ -0.6
ATXN3-236ENST00000556220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATXN3-236ENST00000556220 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.6
ATXN3-236ENST00000556220 PREX2Q70Z35 1606 aa11.27□□□□□ -0.6
ATXN3-236ENST00000556220 ALKQ9UM73 1620 aa11.27□□□□□ -0.6
ATXN3-236ENST00000556220 CFDP1Q9UEE9 299 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-236ENST00000556220 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.61
ATXN3-236ENST00000556220 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
ATXN3-236ENST00000556220 POTEAQ6S8J7 498 aa11.26□□□□□ -0.61
ATXN3-236ENST00000556220 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
ATXN3-236ENST00000556220 SUPT6HQ7KZ85 1726 aaKnown RBP11.26□□□□□ -0.61
ATXN3-236ENST00000556220 GPATCH8Q9UKJ3 1502 aaKnown RBP11.25□□□□□ -0.61
ATXN3-236ENST00000556220 PLXNC1O60486 1568 aa11.25□□□□□ -0.61
ATXN3-236ENST00000556220 VWDEQ8N2E2 1590 aa11.25□□□□□ -0.61
ATXN3-236ENST00000556220 NEURL4Q96JN8 1562 aa11.25□□□□□ -0.61
ATXN3-236ENST00000556220 DDX27Q96GQ7 796 aaKnown RBP11.25□□□□□ -0.61
ATXN3-236ENST00000556220 NPHP4O75161 1426 aaPredicted RBP11.25□□□□□ -0.61
ATXN3-236ENST00000556220 SYCP2Q9BX26 1530 aa11.25□□□□□ -0.61
ATXN3-236ENST00000556220 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
ATXN3-236ENST00000556220 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
ATXN3-236ENST00000556220 MED14O60244 1454 aa11.24□□□□□ -0.61
ATXN3-236ENST00000556220 ATP7AQ04656 1500 aa11.24□□□□□ -0.61
ATXN3-236ENST00000556220 MFSD10Q14728 455 aa11.23□□□□□ -0.61
ATXN3-236ENST00000556220 DHX29Q7Z478 1369 aaKnown RBP11.23□□□□□ -0.61
ATXN3-236ENST00000556220 MIA2Q96PC5 1412 aa11.23□□□□□ -0.61
ATXN3-236ENST00000556220 CCDC18Q5T9S5 1454 aa11.23□□□□□ -0.61
ATXN3-236ENST00000556220 PLEKHH2Q8IVE3 1493 aa11.23□□□□□ -0.61
ATXN3-236ENST00000556220 LRRC7Q96NW7 1537 aa11.23□□□□□ -0.61
ATXN3-236ENST00000556220 KIF3BO15066 747 aa11.22□□□□□ -0.61
ATXN3-236ENST00000556220 WASHC2CQ9Y4E1 1318 aa11.22□□□□□ -0.61
ATXN3-236ENST00000556220 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
ATXN3-236ENST00000556220 FAM135AQ9P2D6 1515 aa11.2□□□□□ -0.62
ATXN3-236ENST00000556220 PZPP20742 1482 aa11.2□□□□□ -0.62
ATXN3-236ENST00000556220 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
ATXN3-236ENST00000556220 CDC42BPAQ5VT25 1732 aa11.2□□□□□ -0.62
ATXN3-236ENST00000556220 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
ATXN3-236ENST00000556220 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
ATXN3-236ENST00000556220 ZNF644Q9H582 1327 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-236ENST00000556220 TK2O00142 265 aa11.19□□□□□ -0.62
ATXN3-236ENST00000556220 ADGRD1Q6QNK2 874 aa11.19□□□□□ -0.62
ATXN3-236ENST00000556220 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-236ENST00000556220 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
ATXN3-236ENST00000556220 LRRIQ1Q96JM4 1722 aa11.18□□□□□ -0.62
ATXN3-236ENST00000556220 INO80Q9ULG1 1556 aaPredicted RBP11.18□□□□□ -0.62
ATXN3-236ENST00000556220 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
ATXN3-236ENST00000556220 UGGT1Q9NYU2 1555 aa11.17□□□□□ -0.62
ATXN3-236ENST00000556220 POLR1AO95602 1720 aaPredicted RBP11.17□□□□□ -0.62
ATXN3-236ENST00000556220 PSEN2P49810 448 aa11.16□□□□□ -0.62
ATXN3-236ENST00000556220 CADPS2Q86UW7 1296 aa11.16□□□□□ -0.62
ATXN3-236ENST00000556220 MBD5Q9P267 1494 aa11.16□□□□□ -0.62
ATXN3-236ENST00000556220 DEPDC5O75140 1603 aa11.16□□□□□ -0.62
ATXN3-236ENST00000556220 EVI5O60447 810 aa11.15□□□□□ -0.62
ATXN3-236ENST00000556220 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
ATXN3-236ENST00000556220 DMRTA1Q5VZB9 504 aa11.15□□□□□ -0.62
ATXN3-236ENST00000556220 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.62
ATXN3-236ENST00000556220 RSPH4AQ5TD94 716 aa11.14□□□□□ -0.63
ATXN3-236ENST00000556220 SRCAPQ6ZRS2 3230 aa11.14□□□□□ -0.63
ATXN3-236ENST00000556220 KDM5DQ9BY66 1539 aa11.14□□□□□ -0.63
ATXN3-236ENST00000556220 LTKP29376 864 aa11.13□□□□□ -0.63
ATXN3-236ENST00000556220 FOSBP53539 338 aa11.13□□□□□ -0.63
ATXN3-236ENST00000556220 TXNDC2Q86VQ3 553 aa11.13□□□□□ -0.63
ATXN3-236ENST00000556220 BCL2L12Q9HB09 334 aa11.13□□□□□ -0.63
ATXN3-236ENST00000556220 RNF17Q9BXT8 1623 aaKnown RBP11.13□□□□□ -0.63
ATXN3-236ENST00000556220 ADGBQ8N7X0 1667 aa11.12□□□□□ -0.63
ATXN3-236ENST00000556220 KCNK17Q96T54 332 aa11.12□□□□□ -0.63
ATXN3-236ENST00000556220 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
ATXN3-236ENST00000556220 IQGAP1P46940 1657 aa11.11□□□□□ -0.63
ATXN3-236ENST00000556220 STRCP1A6NGW2 1772 aa11.11□□□□□ -0.63
ATXN3-236ENST00000556220 HRO43593 1189 aa11.11□□□□□ -0.63
ATXN3-236ENST00000556220 EMILIN3Q9NT22 766 aa11.11□□□□□ -0.63
ATXN3-236ENST00000556220 MTUS2Q5JR59 1369 aa11.11□□□□□ -0.63
ATXN3-236ENST00000556220 SYNMO15061 1565 aa11.1□□□□□ -0.63
ATXN3-236ENST00000556220 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.09□□□□□ -0.63
ATXN3-236ENST00000556220 EID1Q9Y6B2 187 aa11.09□□□□□ -0.63
ATXN3-236ENST00000556220 SCAF11Q99590 1463 aaKnown RBP11.08□□□□□ -0.64
ATXN3-236ENST00000556220 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
ATXN3-236ENST00000556220 TSPY4P0CV99 314 aa11.08□□□□□ -0.64
ATXN3-236ENST00000556220 TSPY10P0CW01 314 aa11.08□□□□□ -0.64
ATXN3-236ENST00000556220 KCNA6P17658 529 aa11.08□□□□□ -0.64
ATXN3-236ENST00000556220 SPRYD3Q8NCJ5 442 aa11.08□□□□□ -0.64
ATXN3-236ENST00000556220 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
ATXN3-236ENST00000556220 PTPREP23469 700 aa11.07□□□□□ -0.64
ATXN3-236ENST00000556220 CAMK2BQ13554 666 aa11.07□□□□□ -0.64
ATXN3-236ENST00000556220 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
ATXN3-236ENST00000556220 STAC3Q96MF2 364 aa11.07□□□□□ -0.64
ATXN3-236ENST00000556220 SLC4A5Q9BY07 1137 aa11.07□□□□□ -0.64
ATXN3-236ENST00000556220 PROSER2Q86WR7 435 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms