RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 TECPR2O15040 1411 aa23.82■■□□□ 1.4
CHGA-204ENST00000556076 YTHDC2Q9H6S0 1430 aaKnown RBP23.82■■□□□ 1.4
CHGA-204ENST00000556076 MYOM2P54296 1465 aa23.81■■□□□ 1.4
CHGA-204ENST00000556076 C14orf93Q9H972 538 aaKnown RBP23.8■■□□□ 1.4
CHGA-204ENST00000556076 SPATA31A6Q5VVP1 1343 aa23.8■■□□□ 1.4
CHGA-204ENST00000556076 ABCC11Q96J66 1382 aa23.79■■□□□ 1.4
CHGA-204ENST00000556076 CDC42BPGQ6DT37 1551 aa23.79■■□□□ 1.4
CHGA-204ENST00000556076 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
CHGA-204ENST00000556076 MEX3CQ5U5Q3 659 aaKnown RBP23.78■■□□□ 1.4
CHGA-204ENST00000556076 HRCP23327 699 aa23.76■■□□□ 1.39
CHGA-204ENST00000556076 LAMC1P11047 1609 aa23.75■■□□□ 1.39
CHGA-204ENST00000556076 SAFB2Q14151 953 aaKnown RBP eCLIP23.75■■□□□ 1.39
CHGA-204ENST00000556076 DCAF11Q8TEB1 546 aa23.75■■□□□ 1.39
CHGA-204ENST00000556076 PNPLA6Q8IY17 1366 aa23.75■■□□□ 1.39
CHGA-204ENST00000556076 ESCO1Q5FWF5 840 aa23.74■■□□□ 1.39
CHGA-204ENST00000556076 LRRC59Q96AG4 307 aaKnown RBP23.74■■□□□ 1.39
CHGA-204ENST00000556076 XPCQ01831 940 aaPredicted RBP23.73■■□□□ 1.39
CHGA-204ENST00000556076 FMN2Q9NZ56 1722 aa23.73■■□□□ 1.39
CHGA-204ENST00000556076 DHX57Q6P158 1386 aaKnown RBP23.71■■□□□ 1.39
CHGA-204ENST00000556076 RGPD8O14715 1765 aaPredicted RBP23.7■■□□□ 1.39
CHGA-204ENST00000556076 ADGRB1O14514 1584 aa23.7■■□□□ 1.38
CHGA-204ENST00000556076 PRAM1Q96QH2 718 aa23.7■■□□□ 1.38
CHGA-204ENST00000556076 SOS2Q07890 1332 aaPredicted RBP23.69■■□□□ 1.38
CHGA-204ENST00000556076 FOXO3O43524 673 aa23.68■■□□□ 1.38
CHGA-204ENST00000556076 TRAK1Q9UPV9 953 aa23.67■■□□□ 1.38
CHGA-204ENST00000556076 ADAMTS2O95450 1211 aa23.66■■□□□ 1.38
CHGA-204ENST00000556076 PXDNQ92626 1479 aa23.66■■□□□ 1.38
CHGA-204ENST00000556076 AFF2P51816 1311 aa23.65■■□□□ 1.38
CHGA-204ENST00000556076 C8orf37Q96NL8 207 aa23.65■■□□□ 1.38
CHGA-204ENST00000556076 SIRT1Q96EB6 747 aa23.63■■□□□ 1.37
CHGA-204ENST00000556076 HIRIP3Q9BW71 556 aaPredicted RBP23.63■■□□□ 1.37
CHGA-204ENST00000556076 POGKQ9P215 609 aa23.62■■□□□ 1.37
CHGA-204ENST00000556076 DLC1Q96QB1 1528 aa23.62■■□□□ 1.37
CHGA-204ENST00000556076 NPHP3Q7Z494 1330 aa23.61■■□□□ 1.37
CHGA-204ENST00000556076 ZNF772Q68DY9 489 aaPredicted RBP23.61■■□□□ 1.37
CHGA-204ENST00000556076 USP32Q8NFA0 1604 aa23.6■■□□□ 1.37
CHGA-204ENST00000556076 MINK1Q8N4C8 1332 aaPredicted RBP23.59■■□□□ 1.37
CHGA-204ENST00000556076 COL22A1Q8NFW1 1626 aaPredicted RBP23.59■■□□□ 1.37
CHGA-204ENST00000556076 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
CHGA-204ENST00000556076 ARHGEF28Q8N1W1 1705 aaKnown RBP23.56■■□□□ 1.36
CHGA-204ENST00000556076 PLEKHG5O94827 1062 aa23.55■■□□□ 1.36
CHGA-204ENST00000556076 NGLY1Q96IV0 654 aa23.55■■□□□ 1.36
CHGA-204ENST00000556076 ADGRB2O60241 1585 aa23.54■■□□□ 1.36
CHGA-204ENST00000556076 KRT28Q7Z3Y7 464 aa23.54■■□□□ 1.36
CHGA-204ENST00000556076 PHF8Q9UPP1 1060 aa23.54■■□□□ 1.36
CHGA-204ENST00000556076 PMFBP1Q8TBY8 1022 aa23.53■■□□□ 1.36
CHGA-204ENST00000556076 RXRBP28702 533 aa23.52■■□□□ 1.36
CHGA-204ENST00000556076 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
CHGA-204ENST00000556076 PRR36Q9H6K5 1346 aa23.52■■□□□ 1.36
CHGA-204ENST00000556076 NBPF1Q3BBV0 1214 aa23.51■■□□□ 1.35
CHGA-204ENST00000556076 QTRT2Q9H974 415 aaKnown RBP23.51■■□□□ 1.35
CHGA-204ENST00000556076 SPATA31A3Q5VYP0 1347 aa23.51■■□□□ 1.35
CHGA-204ENST00000556076 STAC3Q96MF2 364 aa23.49■■□□□ 1.35
CHGA-204ENST00000556076 MARF1Q9Y4F3 1742 aaKnown RBP23.49■■□□□ 1.35
CHGA-204ENST00000556076 CABLES1Q8TDN4 633 aa23.47■■□□□ 1.35
CHGA-204ENST00000556076 WASLO00401 505 aaPredicted RBP23.46■■□□□ 1.35
CHGA-204ENST00000556076 ANKARQ7Z5J8 1434 aa23.46■■□□□ 1.35
CHGA-204ENST00000556076 USP21Q9UK80 565 aa23.46■■□□□ 1.35
CHGA-204ENST00000556076 KIAA1210Q9ULL0 1709 aa23.46■■□□□ 1.35
CHGA-204ENST00000556076 RGS12O14924 1447 aa23.45■■□□□ 1.34
CHGA-204ENST00000556076 NEUROD1Q13562 356 aa23.45■■□□□ 1.34
CHGA-204ENST00000556076 LMOD2Q6P5Q4 547 aa23.45■■□□□ 1.34
CHGA-204ENST00000556076 L3MBTL2Q969R5 705 aa23.45■■□□□ 1.34
CHGA-204ENST00000556076 TULP4Q9NRJ4 1543 aa23.44■■□□□ 1.34
CHGA-204ENST00000556076 TNS3Q68CZ2 1445 aa23.44■■□□□ 1.34
CHGA-204ENST00000556076 PSME1Q06323 249 aa23.44■■□□□ 1.34
CHGA-204ENST00000556076 FNBP4Q8N3X1 1017 aaPredicted RBP23.43■■□□□ 1.34
CHGA-204ENST00000556076 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
CHGA-204ENST00000556076 ABCA3Q99758 1704 aa23.42■■□□□ 1.34
CHGA-204ENST00000556076 RBM6P78332 1123 aaKnown RBP23.41■■□□□ 1.34
CHGA-204ENST00000556076 BCL9LQ86UU0 1499 aa23.41■■□□□ 1.34
CHGA-204ENST00000556076 CDK12Q9NYV4 1490 aaPredicted RBP23.4■■□□□ 1.34
CHGA-204ENST00000556076 ATP7BP35670 1465 aa23.39■■□□□ 1.34
CHGA-204ENST00000556076 ATRNO75882 1429 aa23.39■■□□□ 1.33
CHGA-204ENST00000556076 SBNO1A3KN83 1393 aa23.39■■□□□ 1.33
CHGA-204ENST00000556076 CDK19Q9BWU1 502 aa23.38■■□□□ 1.33
CHGA-204ENST00000556076 UPF1Q92900 1129 aaKnown RBP eCLIP23.37■■□□□ 1.33
CHGA-204ENST00000556076 NUDT16Q96DE0 195 aaKnown RBP23.37■■□□□ 1.33
CHGA-204ENST00000556076 ALS2Q96Q42 1657 aa23.36■■□□□ 1.33
CHGA-204ENST00000556076 HAP1P54257 671 aaPredicted RBP23.36■■□□□ 1.33
CHGA-204ENST00000556076 TRPC5Q9UL62 973 aaPredicted RBP23.36■■□□□ 1.33
CHGA-204ENST00000556076 EIF3AQ14152 1382 aaKnown RBP23.35■■□□□ 1.33
CHGA-204ENST00000556076 ITSN1Q15811 1721 aa23.34■■□□□ 1.33
CHGA-204ENST00000556076 NGDNQ8NEJ9 315 aaKnown RBP23.34■■□□□ 1.33
CHGA-204ENST00000556076 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.33
CHGA-204ENST00000556076 SLIT2O94813 1529 aa23.33■■□□□ 1.32
CHGA-204ENST00000556076 PLCH1Q4KWH8 1693 aa23.32■■□□□ 1.32
CHGA-204ENST00000556076 TOPAZ1Q8N9V7 1692 aa23.32■■□□□ 1.32
CHGA-204ENST00000556076 QRICH2Q9H0J4 1663 aa23.32■■□□□ 1.32
CHGA-204ENST00000556076 ARHGEF10O15013 1369 aa23.32■■□□□ 1.32
CHGA-204ENST00000556076 GPRASP1Q5JY77 1395 aa23.32■■□□□ 1.32
CHGA-204ENST00000556076 PAK3O75914 559 aaPredicted RBP23.31■■□□□ 1.32
CHGA-204ENST00000556076 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.3■■□□□ 1.32
CHGA-204ENST00000556076 CENPJQ9HC77 1338 aaPredicted RBP23.3■■□□□ 1.32
CHGA-204ENST00000556076 GLI3P10071 1580 aa23.29■■□□□ 1.32
CHGA-204ENST00000556076 CRYBG1Q9Y4K1 1723 aa23.28■■□□□ 1.32
CHGA-204ENST00000556076 NBPF8Q3BBV2 869 aa23.28■■□□□ 1.32
CHGA-204ENST00000556076 UNC5CLQ8IV45 518 aa23.28■■□□□ 1.32
CHGA-204ENST00000556076 CABP2Q9NPB3 220 aa23.28■■□□□ 1.32
CHGA-204ENST00000556076 EP400Q96L91 3159 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms