RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CDC42BPGQ6DT37 1551 aa35.81■■■■□ 3.32
PRKCH-216ENST00000555542 CFAP70Q5T0N1 1121 aa35.8■■■■□ 3.32
PRKCH-216ENST00000555542 LRRC59Q96AG4 307 aaKnown RBP35.8■■■■□ 3.32
PRKCH-216ENST00000555542 LRP6O75581 1613 aa35.79■■■■□ 3.32
PRKCH-216ENST00000555542 ORAI2Q96SN7 254 aa35.79■■■■□ 3.32
PRKCH-216ENST00000555542 NUTM2BA6NNL0 878 aaPredicted RBP35.78■■■■□ 3.32
PRKCH-216ENST00000555542 NUTM2EB1AL46 878 aaPredicted RBP35.78■■■■□ 3.32
PRKCH-216ENST00000555542 NUTM2AQ8IVF1 878 aaPredicted RBP35.78■■■■□ 3.32
PRKCH-216ENST00000555542 DHX57Q6P158 1386 aaKnown RBP35.77■■■■□ 3.32
PRKCH-216ENST00000555542 KDM2AQ9Y2K7 1162 aa35.76■■■■□ 3.32
PRKCH-216ENST00000555542 PLEKHH1Q9ULM0 1364 aa35.76■■■■□ 3.31
PRKCH-216ENST00000555542 POTEAQ6S8J7 498 aa35.74■■■■□ 3.31
PRKCH-216ENST00000555542 DCAF11Q8TEB1 546 aa35.74■■■■□ 3.31
PRKCH-216ENST00000555542 ESCO1Q5FWF5 840 aa35.72■■■■□ 3.31
PRKCH-216ENST00000555542 NUTM2FA1L443 756 aa35.7■■■■□ 3.31
PRKCH-216ENST00000555542 PNPLA6Q8IY17 1366 aa35.67■■■■□ 3.3
PRKCH-216ENST00000555542 SIRT1Q96EB6 747 aa35.67■■■■□ 3.3
PRKCH-216ENST00000555542 SOS2Q07890 1332 aaPredicted RBP35.64■■■■□ 3.3
PRKCH-216ENST00000555542 FMN2Q9NZ56 1722 aa35.64■■■■□ 3.3
PRKCH-216ENST00000555542 SAFB2Q14151 953 aaKnown RBP eCLIP35.64■■■■□ 3.3
PRKCH-216ENST00000555542 ZNF772Q68DY9 489 aaPredicted RBP35.63■■■■□ 3.29
PRKCH-216ENST00000555542 STAC3Q96MF2 364 aa35.63■■■■□ 3.29
PRKCH-216ENST00000555542 PRAM1Q96QH2 718 aa35.63■■■■□ 3.29
PRKCH-216ENST00000555542 POGKQ9P215 609 aa35.63■■■■□ 3.29
PRKCH-216ENST00000555542 NPHP3Q7Z494 1330 aa35.62■■■■□ 3.29
PRKCH-216ENST00000555542 ADGRB1O14514 1584 aa35.59■■■■□ 3.29
PRKCH-216ENST00000555542 DLC1Q96QB1 1528 aa35.58■■■■□ 3.29
PRKCH-216ENST00000555542 FOXO3O43524 673 aa35.57■■■■□ 3.28
PRKCH-216ENST00000555542 TRAK1Q9UPV9 953 aa35.57■■■■□ 3.28
PRKCH-216ENST00000555542 XPCQ01831 940 aaPredicted RBP35.55■■■■□ 3.28
PRKCH-216ENST00000555542 C8orf37Q96NL8 207 aa35.55■■■■□ 3.28
PRKCH-216ENST00000555542 KIF1AQ12756 1690 aa35.53■■■■□ 3.28
PRKCH-216ENST00000555542 ADAMTS2O95450 1211 aa35.52■■■■□ 3.28
PRKCH-216ENST00000555542 AFF2P51816 1311 aa35.52■■■■□ 3.28
PRKCH-216ENST00000555542 PXDNQ92626 1479 aa35.51■■■■□ 3.28
PRKCH-216ENST00000555542 RGPD8O14715 1765 aaPredicted RBP35.5■■■■□ 3.27
PRKCH-216ENST00000555542 COL22A1Q8NFW1 1626 aaPredicted RBP35.46■■■■□ 3.27
PRKCH-216ENST00000555542 NGLY1Q96IV0 654 aa35.45■■■■□ 3.27
PRKCH-216ENST00000555542 ADGRB2O60241 1585 aa35.44■■■■□ 3.26
PRKCH-216ENST00000555542 MINK1Q8N4C8 1332 aaPredicted RBP35.44■■■■□ 3.26
PRKCH-216ENST00000555542 HIRIP3Q9BW71 556 aaPredicted RBP35.44■■■■□ 3.26
PRKCH-216ENST00000555542 PHF8Q9UPP1 1060 aa35.44■■■■□ 3.26
PRKCH-216ENST00000555542 RXRBP28702 533 aa35.42■■■■□ 3.26
PRKCH-216ENST00000555542 KRT28Q7Z3Y7 464 aa35.4■■■■□ 3.26
PRKCH-216ENST00000555542 ANKARQ7Z5J8 1434 aa35.39■■■■□ 3.26
PRKCH-216ENST00000555542 ARHGEF28Q8N1W1 1705 aaKnown RBP35.38■■■■□ 3.25
PRKCH-216ENST00000555542 KIAA1210Q9ULL0 1709 aa35.37■■■■□ 3.25
PRKCH-216ENST00000555542 EIF3AQ14152 1382 aaKnown RBP35.37■■■■□ 3.25
PRKCH-216ENST00000555542 PSME1Q06323 249 aa35.36■■■■□ 3.25
PRKCH-216ENST00000555542 USP32Q8NFA0 1604 aa35.35■■■■□ 3.25
PRKCH-216ENST00000555542 SPATA31A3Q5VYP0 1347 aa35.34■■■■□ 3.25
PRKCH-216ENST00000555542 QTRT2Q9H974 415 aaKnown RBP35.34■■■■□ 3.25
PRKCH-216ENST00000555542 PMFBP1Q8TBY8 1022 aa35.33■■■■□ 3.25
PRKCH-216ENST00000555542 WASLO00401 505 aaPredicted RBP35.31■■■■□ 3.24
PRKCH-216ENST00000555542 USP21Q9UK80 565 aa35.31■■■■□ 3.24
PRKCH-216ENST00000555542 TULP4Q9NRJ4 1543 aa35.31■■■■□ 3.24
PRKCH-216ENST00000555542 MARF1Q9Y4F3 1742 aaKnown RBP35.29■■■■□ 3.24
PRKCH-216ENST00000555542 LMOD2Q6P5Q4 547 aa35.29■■■■□ 3.24
PRKCH-216ENST00000555542 TNS3Q68CZ2 1445 aa35.29■■■■□ 3.24
PRKCH-216ENST00000555542 HAP1P54257 671 aaPredicted RBP35.27■■■■□ 3.24
PRKCH-216ENST00000555542 RBM6P78332 1123 aaKnown RBP35.27■■■■□ 3.24
PRKCH-216ENST00000555542 PLEKHG5O94827 1062 aa35.26■■■■□ 3.24
PRKCH-216ENST00000555542 NEUROD1Q13562 356 aa35.26■■■■□ 3.24
PRKCH-216ENST00000555542 SIN3AQ96ST3 1273 aa35.26■■■■□ 3.24
PRKCH-216ENST00000555542 CDK12Q9NYV4 1490 aaPredicted RBP35.26■■■■□ 3.23
PRKCH-216ENST00000555542 NBPF1Q3BBV0 1214 aa35.25■■■■□ 3.23
PRKCH-216ENST00000555542 PRR36Q9H6K5 1346 aa35.24■■■■□ 3.23
PRKCH-216ENST00000555542 SBNO1A3KN83 1393 aa35.24■■■■□ 3.23
PRKCH-216ENST00000555542 FNBP4Q8N3X1 1017 aaPredicted RBP35.23■■■■□ 3.23
PRKCH-216ENST00000555542 L3MBTL2Q969R5 705 aa35.23■■■■□ 3.23
PRKCH-216ENST00000555542 TRPC5Q9UL62 973 aaPredicted RBP35.23■■■■□ 3.23
PRKCH-216ENST00000555542 GPRASP1Q5JY77 1395 aa35.22■■■■□ 3.23
PRKCH-216ENST00000555542 ARHGEF10O15013 1369 aa35.2■■■■□ 3.23
PRKCH-216ENST00000555542 ITSN1Q15811 1721 aa35.2■■■■□ 3.23
PRKCH-216ENST00000555542 NGDNQ8NEJ9 315 aaKnown RBP35.19■■■■□ 3.22
PRKCH-216ENST00000555542 RGS12O14924 1447 aa35.17■■■■□ 3.22
PRKCH-216ENST00000555542 CABLES1Q8TDN4 633 aa35.16■■■■□ 3.22
PRKCH-216ENST00000555542 NUDT16Q96DE0 195 aaKnown RBP35.15■■■■□ 3.22
PRKCH-216ENST00000555542 CDK19Q9BWU1 502 aa35.15■■■■□ 3.22
PRKCH-216ENST00000555542 ATP7BP35670 1465 aa35.14■■■■□ 3.22
PRKCH-216ENST00000555542 TRPM3Q9HCF6 1732 aaPredicted RBP35.13■■■■□ 3.21
PRKCH-216ENST00000555542 ATRNO75882 1429 aa35.13■■■■□ 3.21
PRKCH-216ENST00000555542 BCL9LQ86UU0 1499 aa35.11■■■■□ 3.21
PRKCH-216ENST00000555542 ABCA3Q99758 1704 aa35.11■■■■□ 3.21
PRKCH-216ENST00000555542 CENPJQ9HC77 1338 aaPredicted RBP35.1■■■■□ 3.21
PRKCH-216ENST00000555542 PAK3O75914 559 aaPredicted RBP35.1■■■■□ 3.21
PRKCH-216ENST00000555542 TRIM26Q12899 539 aaPredicted RBP35.09■■■■□ 3.21
PRKCH-216ENST00000555542 TRPM1Q7Z4N2 1603 aa35.08■■■■□ 3.21
PRKCH-216ENST00000555542 QRICH2Q9H0J4 1663 aa35.07■■■■□ 3.2
PRKCH-216ENST00000555542 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.06■■■■□ 3.2
PRKCH-216ENST00000555542 ALS2Q96Q42 1657 aa35.06■■■■□ 3.2
PRKCH-216ENST00000555542 UPF1Q92900 1129 aaKnown RBP eCLIP35.06■■■■□ 3.2
PRKCH-216ENST00000555542 SRPK2P78362 688 aaKnown RBP35.05■■■■□ 3.2
PRKCH-216ENST00000555542 UNC5CLQ8IV45 518 aa35.05■■■■□ 3.2
PRKCH-216ENST00000555542 SLIT2O94813 1529 aa35.04■■■■□ 3.2
PRKCH-216ENST00000555542 TOPAZ1Q8N9V7 1692 aa35.04■■■■□ 3.2
PRKCH-216ENST00000555542 ROCK2O75116 1388 aaKnown RBP35.03■■■■□ 3.2
PRKCH-216ENST00000555542 CCDC61Q9Y6R9 512 aa35.03■■■■□ 3.2
PRKCH-216ENST00000555542 GJD4Q96KN9 370 aaPredicted RBP35.01■■■■□ 3.2
PRKCH-216ENST00000555542 PLCH1Q4KWH8 1693 aa35.01■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms