RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 LRP6O75581 1613 aa28.53■■■□□ 2.16
CBLN3-202ENST00000555436 CDC42BPGQ6DT37 1551 aa28.53■■■□□ 2.16
CBLN3-202ENST00000555436 SIRT1Q96EB6 747 aa28.52■■■□□ 2.16
CBLN3-202ENST00000555436 PLEKHH1Q9ULM0 1364 aa28.51■■■□□ 2.16
CBLN3-202ENST00000555436 KNDC1Q76NI1 1749 aa28.5■■■□□ 2.15
CBLN3-202ENST00000555436 POTEAQ6S8J7 498 aa28.5■■■□□ 2.15
CBLN3-202ENST00000555436 DHX57Q6P158 1386 aaKnown RBP28.5■■■□□ 2.15
CBLN3-202ENST00000555436 LAMC1P11047 1609 aa28.49■■■□□ 2.15
CBLN3-202ENST00000555436 MEX3CQ5U5Q3 659 aaKnown RBP28.47■■■□□ 2.15
CBLN3-202ENST00000555436 STAC3Q96MF2 364 aa28.47■■■□□ 2.15
CBLN3-202ENST00000555436 DCAF11Q8TEB1 546 aa28.46■■■□□ 2.15
CBLN3-202ENST00000555436 SOS2Q07890 1332 aaPredicted RBP28.45■■■□□ 2.15
CBLN3-202ENST00000555436 NUTM2BA6NNL0 878 aaPredicted RBP28.44■■■□□ 2.14
CBLN3-202ENST00000555436 NUTM2EB1AL46 878 aaPredicted RBP28.44■■■□□ 2.14
CBLN3-202ENST00000555436 ESCO1Q5FWF5 840 aa28.44■■■□□ 2.14
CBLN3-202ENST00000555436 NUTM2AQ8IVF1 878 aaPredicted RBP28.44■■■□□ 2.14
CBLN3-202ENST00000555436 KDM2AQ9Y2K7 1162 aa28.44■■■□□ 2.14
CBLN3-202ENST00000555436 PNPLA6Q8IY17 1366 aa28.44■■■□□ 2.14
CBLN3-202ENST00000555436 ADGRB1O14514 1584 aa28.4■■■□□ 2.14
CBLN3-202ENST00000555436 PRAM1Q96QH2 718 aa28.39■■■□□ 2.14
CBLN3-202ENST00000555436 NPHP3Q7Z494 1330 aa28.39■■■□□ 2.13
CBLN3-202ENST00000555436 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
CBLN3-202ENST00000555436 ZNF772Q68DY9 489 aaPredicted RBP28.38■■■□□ 2.13
CBLN3-202ENST00000555436 DLC1Q96QB1 1528 aa28.38■■■□□ 2.13
CBLN3-202ENST00000555436 FOXO3O43524 673 aa28.35■■■□□ 2.13
CBLN3-202ENST00000555436 SAFB2Q14151 953 aaKnown RBP eCLIP28.34■■■□□ 2.13
CBLN3-202ENST00000555436 POGKQ9P215 609 aa28.34■■■□□ 2.13
CBLN3-202ENST00000555436 FMN2Q9NZ56 1722 aa28.32■■■□□ 2.12
CBLN3-202ENST00000555436 TRAK1Q9UPV9 953 aa28.32■■■□□ 2.12
CBLN3-202ENST00000555436 PXDNQ92626 1479 aa28.32■■■□□ 2.12
CBLN3-202ENST00000555436 AFF2P51816 1311 aa28.28■■■□□ 2.12
CBLN3-202ENST00000555436 XPCQ01831 940 aaPredicted RBP28.28■■■□□ 2.12
CBLN3-202ENST00000555436 C8orf37Q96NL8 207 aa28.27■■■□□ 2.12
CBLN3-202ENST00000555436 ADAMTS2O95450 1211 aa28.25■■■□□ 2.11
CBLN3-202ENST00000555436 PHF8Q9UPP1 1060 aa28.24■■■□□ 2.11
CBLN3-202ENST00000555436 ADGRB2O60241 1585 aa28.24■■■□□ 2.11
CBLN3-202ENST00000555436 KIF1AQ12756 1690 aa28.23■■■□□ 2.11
CBLN3-202ENST00000555436 COL22A1Q8NFW1 1626 aaPredicted RBP28.23■■■□□ 2.11
CBLN3-202ENST00000555436 ANKARQ7Z5J8 1434 aa28.22■■■□□ 2.11
CBLN3-202ENST00000555436 RXRBP28702 533 aa28.21■■■□□ 2.11
CBLN3-202ENST00000555436 NGLY1Q96IV0 654 aa28.21■■■□□ 2.11
CBLN3-202ENST00000555436 HIRIP3Q9BW71 556 aaPredicted RBP28.21■■■□□ 2.11
CBLN3-202ENST00000555436 MINK1Q8N4C8 1332 aaPredicted RBP28.2■■■□□ 2.11
CBLN3-202ENST00000555436 KRT28Q7Z3Y7 464 aa28.2■■■□□ 2.1
CBLN3-202ENST00000555436 SPATA31A3Q5VYP0 1347 aa28.18■■■□□ 2.1
CBLN3-202ENST00000555436 EIF3AQ14152 1382 aaKnown RBP28.17■■■□□ 2.1
CBLN3-202ENST00000555436 WASLO00401 505 aaPredicted RBP28.16■■■□□ 2.1
CBLN3-202ENST00000555436 PSME1Q06323 249 aa28.16■■■□□ 2.1
CBLN3-202ENST00000555436 QTRT2Q9H974 415 aaKnown RBP28.15■■■□□ 2.1
CBLN3-202ENST00000555436 USP32Q8NFA0 1604 aa28.14■■■□□ 2.09
CBLN3-202ENST00000555436 FNBP4Q8N3X1 1017 aaPredicted RBP28.13■■■□□ 2.09
CBLN3-202ENST00000555436 RGPD8O14715 1765 aaPredicted RBP28.13■■■□□ 2.09
CBLN3-202ENST00000555436 CDK12Q9NYV4 1490 aaPredicted RBP28.13■■■□□ 2.09
CBLN3-202ENST00000555436 KIAA1210Q9ULL0 1709 aa28.12■■■□□ 2.09
CBLN3-202ENST00000555436 NBPF1Q3BBV0 1214 aa28.12■■■□□ 2.09
CBLN3-202ENST00000555436 PMFBP1Q8TBY8 1022 aa28.12■■■□□ 2.09
CBLN3-202ENST00000555436 PRR36Q9H6K5 1346 aa28.12■■■□□ 2.09
CBLN3-202ENST00000555436 TULP4Q9NRJ4 1543 aa28.12■■■□□ 2.09
CBLN3-202ENST00000555436 SBNO1A3KN83 1393 aa28.11■■■□□ 2.09
CBLN3-202ENST00000555436 TNS3Q68CZ2 1445 aa28.11■■■□□ 2.09
CBLN3-202ENST00000555436 L3MBTL2Q969R5 705 aa28.11■■■□□ 2.09
CBLN3-202ENST00000555436 USP21Q9UK80 565 aa28.11■■■□□ 2.09
CBLN3-202ENST00000555436 ARHGEF28Q8N1W1 1705 aaKnown RBP28.11■■■□□ 2.09
CBLN3-202ENST00000555436 RBM6P78332 1123 aaKnown RBP28.1■■■□□ 2.09
CBLN3-202ENST00000555436 SIN3AQ96ST3 1273 aa28.1■■■□□ 2.09
CBLN3-202ENST00000555436 TRPC5Q9UL62 973 aaPredicted RBP28.06■■■□□ 2.08
CBLN3-202ENST00000555436 ARHGEF10O15013 1369 aa28.05■■■□□ 2.08
CBLN3-202ENST00000555436 GPRASP1Q5JY77 1395 aa28.04■■■□□ 2.08
CBLN3-202ENST00000555436 NEUROD1Q13562 356 aa28.04■■■□□ 2.08
CBLN3-202ENST00000555436 LMOD2Q6P5Q4 547 aa28.02■■■□□ 2.08
CBLN3-202ENST00000555436 NUDT16Q96DE0 195 aaKnown RBP28.02■■■□□ 2.08
CBLN3-202ENST00000555436 CDK19Q9BWU1 502 aa28.02■■■□□ 2.08
CBLN3-202ENST00000555436 ATP7BP35670 1465 aa28.02■■■□□ 2.08
CBLN3-202ENST00000555436 BCL9LQ86UU0 1499 aa28.02■■■□□ 2.08
CBLN3-202ENST00000555436 RGS12O14924 1447 aa28.01■■■□□ 2.08
CBLN3-202ENST00000555436 ATRNO75882 1429 aa28.01■■■□□ 2.08
CBLN3-202ENST00000555436 NGDNQ8NEJ9 315 aaKnown RBP28■■■□□ 2.07
CBLN3-202ENST00000555436 CABLES1Q8TDN4 633 aa28■■■□□ 2.07
CBLN3-202ENST00000555436 HAP1P54257 671 aaPredicted RBP27.99■■■□□ 2.07
CBLN3-202ENST00000555436 MARF1Q9Y4F3 1742 aaKnown RBP27.98■■■□□ 2.07
CBLN3-202ENST00000555436 CENPJQ9HC77 1338 aaPredicted RBP27.97■■■□□ 2.07
CBLN3-202ENST00000555436 TRIM26Q12899 539 aaPredicted RBP27.97■■■□□ 2.07
CBLN3-202ENST00000555436 SLIT2O94813 1529 aa27.96■■■□□ 2.07
CBLN3-202ENST00000555436 TRPM3Q9HCF6 1732 aaPredicted RBP27.95■■■□□ 2.07
CBLN3-202ENST00000555436 UPF1Q92900 1129 aaKnown RBP eCLIP27.95■■■□□ 2.06
CBLN3-202ENST00000555436 PLEKHG5O94827 1062 aa27.94■■■□□ 2.06
CBLN3-202ENST00000555436 UNC5CLQ8IV45 518 aa27.94■■■□□ 2.06
CBLN3-202ENST00000555436 CCDC61Q9Y6R9 512 aa27.94■■■□□ 2.06
CBLN3-202ENST00000555436 GJD4Q96KN9 370 aaPredicted RBP27.91■■■□□ 2.06
CBLN3-202ENST00000555436 ITSN1Q15811 1721 aa27.91■■■□□ 2.06
CBLN3-202ENST00000555436 POLR3AO14802 1390 aaPredicted RBP27.9■■■□□ 2.06
CBLN3-202ENST00000555436 PLEKHG3A1L390 1219 aa27.9■■■□□ 2.06
CBLN3-202ENST00000555436 PAK3O75914 559 aaPredicted RBP27.9■■■□□ 2.06
CBLN3-202ENST00000555436 ALS2Q96Q42 1657 aa27.9■■■□□ 2.06
CBLN3-202ENST00000555436 TRPM1Q7Z4N2 1603 aa27.89■■■□□ 2.06
CBLN3-202ENST00000555436 ROCK2O75116 1388 aaKnown RBP27.89■■■□□ 2.06
CBLN3-202ENST00000555436 SRPK2P78362 688 aaKnown RBP27.88■■■□□ 2.05
CBLN3-202ENST00000555436 ABCA3Q99758 1704 aa27.88■■■□□ 2.05
CBLN3-202ENST00000555436 ACEP12821 1306 aa27.88■■■□□ 2.05
CBLN3-202ENST00000555436 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms