RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 SMARCA5O60264 1052 aaPredicted RBP9.76□□□□□ -0.85
TGFB3-202ENST00000554980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.76□□□□□ -0.85
TGFB3-202ENST00000554980 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
TGFB3-202ENST00000554980 NOL8Q76FK4 1167 aaKnown RBP9.75□□□□□ -0.85
TGFB3-202ENST00000554980 IFNLR1Q8IU57 520 aaPredicted RBP9.75□□□□□ -0.85
TGFB3-202ENST00000554980 MYO3AQ8NEV4 1616 aa9.75□□□□□ -0.85
TGFB3-202ENST00000554980 NCOA1Q15788 1441 aa9.75□□□□□ -0.85
TGFB3-202ENST00000554980 RNF17Q9BXT8 1623 aaKnown RBP9.74□□□□□ -0.85
TGFB3-202ENST00000554980 SHANK2Q9UPX8 1470 aa9.74□□□□□ -0.85
TGFB3-202ENST00000554980 ITGAEP38570 1179 aa9.74□□□□□ -0.85
TGFB3-202ENST00000554980 ABCC3O15438 1527 aa9.74□□□□□ -0.85
TGFB3-202ENST00000554980 DUOX2Q9NRD8 1548 aa9.74□□□□□ -0.85
TGFB3-202ENST00000554980 CAMSAP1Q5T5Y3 1602 aa9.74□□□□□ -0.85
TGFB3-202ENST00000554980 CEP152O94986 1710 aa9.74□□□□□ -0.85
TGFB3-202ENST00000554980 LMOD2Q6P5Q4 547 aa9.73□□□□□ -0.85
TGFB3-202ENST00000554980 PZPP20742 1482 aa9.73□□□□□ -0.85
TGFB3-202ENST00000554980 CEP170BQ9Y4F5 1589 aaPredicted RBP9.72□□□□□ -0.85
TGFB3-202ENST00000554980 TNRQ92752 1358 aa9.72□□□□□ -0.85
TGFB3-202ENST00000554980 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.85
TGFB3-202ENST00000554980 ANKRD30AQ9BXX3 1397 aa9.71□□□□□ -0.86
TGFB3-202ENST00000554980 ERBINQ96RT1 1412 aa9.7□□□□□ -0.86
TGFB3-202ENST00000554980 ZNF142P52746 1687 aaPredicted RBP9.7□□□□□ -0.86
TGFB3-202ENST00000554980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.7□□□□□ -0.86
TGFB3-202ENST00000554980 ADGRL2O95490 1459 aa9.69□□□□□ -0.86
TGFB3-202ENST00000554980 PRDM15P57071 1507 aaPredicted RBP9.69□□□□□ -0.86
TGFB3-202ENST00000554980 A2ML1A8K2U0 1454 aa9.69□□□□□ -0.86
TGFB3-202ENST00000554980 CERKQ8TCT0 537 aa9.69□□□□□ -0.86
TGFB3-202ENST00000554980 ZNF335Q9H4Z2 1342 aaPredicted RBP9.68□□□□□ -0.86
TGFB3-202ENST00000554980 DEPDC5O75140 1603 aa9.68□□□□□ -0.86
TGFB3-202ENST00000554980 ERVK-7P63135 1459 aa9.68□□□□□ -0.86
TGFB3-202ENST00000554980 SOX12O15370 315 aa9.68□□□□□ -0.86
TGFB3-202ENST00000554980 MYH16Q9H6N6 1097 aa9.68□□□□□ -0.86
TGFB3-202ENST00000554980 PRDM4Q9UKN5 801 aa9.68□□□□□ -0.86
TGFB3-202ENST00000554980 NME8Q8N427 588 aa9.68□□□□□ -0.86
TGFB3-202ENST00000554980 ANKRD50Q9ULJ7 1429 aa9.67□□□□□ -0.86
TGFB3-202ENST00000554980 SPATA31D1Q6ZQQ2 1576 aa9.67□□□□□ -0.86
TGFB3-202ENST00000554980 DIEXFQ68CQ4 756 aaKnown RBP9.67□□□□□ -0.86
TGFB3-202ENST00000554980 ANKRD13AQ8IZ07 590 aa9.67□□□□□ -0.86
TGFB3-202ENST00000554980 CDCA8Q53HL2 280 aa9.67□□□□□ -0.86
TGFB3-202ENST00000554980 AXDND1Q5T1B0 1012 aaPredicted RBP9.67□□□□□ -0.86
TGFB3-202ENST00000554980 FBXO41Q8TF61 875 aa9.67□□□□□ -0.86
TGFB3-202ENST00000554980 HDAC5Q9UQL6 1122 aa9.67□□□□□ -0.86
TGFB3-202ENST00000554980 PTPRTO14522 1441 aa9.67□□□□□ -0.86
TGFB3-202ENST00000554980 ZC3H13Q5T200 1668 aaKnown RBP9.67□□□□□ -0.86
TGFB3-202ENST00000554980 VWDEQ8N2E2 1590 aa9.66□□□□□ -0.86
TGFB3-202ENST00000554980 FAM135AQ9P2D6 1515 aa9.66□□□□□ -0.86
TGFB3-202ENST00000554980 MARCH6O60337 910 aa9.66□□□□□ -0.86
TGFB3-202ENST00000554980 DMRT2Q9Y5R5 561 aa9.66□□□□□ -0.86
TGFB3-202ENST00000554980 UGGT1Q9NYU2 1555 aa9.66□□□□□ -0.86
TGFB3-202ENST00000554980 SPATA32Q96LK8 384 aa9.66□□□□□ -0.86
TGFB3-202ENST00000554980 SLC24A3Q9HC58 644 aa9.66□□□□□ -0.86
TGFB3-202ENST00000554980 LTBP4Q8N2S1 1624 aa9.66□□□□□ -0.86
TGFB3-202ENST00000554980 NEURL4Q96JN8 1562 aa9.65□□□□□ -0.86
TGFB3-202ENST00000554980 MKRN3Q13064 507 aaKnown RBP9.65□□□□□ -0.86
TGFB3-202ENST00000554980 RINLQ6ZS11 566 aa9.65□□□□□ -0.86
TGFB3-202ENST00000554980 TERF2IPQ9NYB0 399 aa9.65□□□□□ -0.86
TGFB3-202ENST00000554980 SH3BP1Q9Y3L3 701 aa9.65□□□□□ -0.86
TGFB3-202ENST00000554980 PPME1Q9Y570 386 aa9.65□□□□□ -0.86
TGFB3-202ENST00000554980 PLA2R1Q13018 1463 aa9.65□□□□□ -0.86
TGFB3-202ENST00000554980 TPD52L2O43399 206 aaKnown RBP9.65□□□□□ -0.86
TGFB3-202ENST00000554980 TSHZ1Q6ZSZ6 1077 aa9.64□□□□□ -0.87
TGFB3-202ENST00000554980 ZNF830Q96NB3 372 aaPredicted RBP9.64□□□□□ -0.87
TGFB3-202ENST00000554980 SENP3Q9H4L4 574 aaPredicted RBP9.64□□□□□ -0.87
TGFB3-202ENST00000554980 SLC52A1Q9NWF4 448 aa9.64□□□□□ -0.87
TGFB3-202ENST00000554980 RRP9O43818 475 aaKnown RBP9.64□□□□□ -0.87
TGFB3-202ENST00000554980 LTKP29376 864 aa9.64□□□□□ -0.87
TGFB3-202ENST00000554980 IDI1Q13907 227 aa9.64□□□□□ -0.87
TGFB3-202ENST00000554980 APBB1IPQ7Z5R6 666 aaPredicted RBP9.64□□□□□ -0.87
TGFB3-202ENST00000554980 NLRP1Q9C000 1473 aa9.64□□□□□ -0.87
TGFB3-202ENST00000554980 ARHGAP31Q2M1Z3 1444 aa9.64□□□□□ -0.87
TGFB3-202ENST00000554980 VASPP50552 380 aaPredicted RBP9.63□□□□□ -0.87
TGFB3-202ENST00000554980 IRF5Q13568 498 aa9.63□□□□□ -0.87
TGFB3-202ENST00000554980 IL27Q8NEV9 243 aa9.63□□□□□ -0.87
TGFB3-202ENST00000554980 THEMISQ8N1K5 641 aaPredicted RBP9.63□□□□□ -0.87
TGFB3-202ENST00000554980 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
TGFB3-202ENST00000554980 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
TGFB3-202ENST00000554980 RRBP1Q9P2E9 1410 aaKnown RBP9.63□□□□□ -0.87
TGFB3-202ENST00000554980 SYNMO15061 1565 aa9.63□□□□□ -0.87
TGFB3-202ENST00000554980 PLCD3Q8N3E9 789 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 SPINK5Q9NQ38 1064 aaPredicted RBP9.62□□□□□ -0.87
TGFB3-202ENST00000554980 LMTK2Q8IWU2 1503 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 KANK1Q14678 1352 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 UBR1Q8IWV7 1749 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 TTC36A6NLP5 189 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 NBPF11Q86T75 865 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 SUGT1Q9Y2Z0 365 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 ROCK1Q13464 1354 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 EFCAB6Q5THR3 1501 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 ANKLE2Q86XL3 938 aa9.62□□□□□ -0.87
TGFB3-202ENST00000554980 PIK3C2BO00750 1634 aa9.61□□□□□ -0.87
TGFB3-202ENST00000554980 POLR1AO95602 1720 aaPredicted RBP9.61□□□□□ -0.87
TGFB3-202ENST00000554980 IGSF5Q9NSI5 407 aa9.61□□□□□ -0.87
TGFB3-202ENST00000554980 NBPF1Q3BBV0 1214 aa9.61□□□□□ -0.87
TGFB3-202ENST00000554980 NOS1P29475 1434 aa9.6□□□□□ -0.87
TGFB3-202ENST00000554980 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
TGFB3-202ENST00000554980 MYBPC2Q14324 1141 aa9.6□□□□□ -0.87
TGFB3-202ENST00000554980 UNC13BO14795 1591 aa9.59□□□□□ -0.87
TGFB3-202ENST00000554980 TESPA1A2RU30 521 aaPredicted RBP9.59□□□□□ -0.87
TGFB3-202ENST00000554980 GORABQ5T7V8 394 aa9.59□□□□□ -0.87
TGFB3-202ENST00000554980 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms