RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 CDK12Q9NYV4 1490 aaPredicted RBP14.16□□□□□ -0.14
SRP54-AS1-201ENST00000554945 HFM1A2PYH4 1435 aa14.15□□□□□ -0.14
SRP54-AS1-201ENST00000554945 C1orf167Q5SNV9 1468 aa14.15□□□□□ -0.14
SRP54-AS1-201ENST00000554945 PNPLA6Q8IY17 1366 aa14.15□□□□□ -0.14
SRP54-AS1-201ENST00000554945 DDX17Q92841 729 aaKnown RBP14.15□□□□□ -0.14
SRP54-AS1-201ENST00000554945 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
SRP54-AS1-201ENST00000554945 LAMC1P11047 1609 aa14.15□□□□□ -0.14
SRP54-AS1-201ENST00000554945 PPLO60437 1756 aa14.14□□□□□ -0.15
SRP54-AS1-201ENST00000554945 ABCB7O75027 752 aa14.14□□□□□ -0.15
SRP54-AS1-201ENST00000554945 ROBO2Q9HCK4 1378 aa14.13□□□□□ -0.15
SRP54-AS1-201ENST00000554945 C8orf37Q96NL8 207 aa14.13□□□□□ -0.15
SRP54-AS1-201ENST00000554945 PRAG1Q86YV5 1406 aa14.13□□□□□ -0.15
SRP54-AS1-201ENST00000554945 QTRT2Q9H974 415 aaKnown RBP14.12□□□□□ -0.15
SRP54-AS1-201ENST00000554945 ORAI2Q96SN7 254 aa14.11□□□□□ -0.15
SRP54-AS1-201ENST00000554945 SOS2Q07890 1332 aaPredicted RBP14.11□□□□□ -0.15
SRP54-AS1-201ENST00000554945 RBM6P78332 1123 aaKnown RBP14.1□□□□□ -0.15
SRP54-AS1-201ENST00000554945 NGLY1Q96IV0 654 aa14.1□□□□□ -0.15
SRP54-AS1-201ENST00000554945 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
SRP54-AS1-201ENST00000554945 ADAMTS2O95450 1211 aa14.08□□□□□ -0.16
SRP54-AS1-201ENST00000554945 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
SRP54-AS1-201ENST00000554945 COL22A1Q8NFW1 1626 aaPredicted RBP14.06□□□□□ -0.16
SRP54-AS1-201ENST00000554945 CCDC144AA2RUR9 1427 aa14.06□□□□□ -0.16
SRP54-AS1-201ENST00000554945 RGS12O14924 1447 aa14.06□□□□□ -0.16
SRP54-AS1-201ENST00000554945 CDC42BPGQ6DT37 1551 aa14.05□□□□□ -0.16
SRP54-AS1-201ENST00000554945 ESCO1Q5FWF5 840 aa14.05□□□□□ -0.16
SRP54-AS1-201ENST00000554945 USP21Q9UK80 565 aa14.05□□□□□ -0.16
SRP54-AS1-201ENST00000554945 NPHP3Q7Z494 1330 aa14.05□□□□□ -0.16
SRP54-AS1-201ENST00000554945 IFT172Q9UG01 1749 aa14.04□□□□□ -0.16
SRP54-AS1-201ENST00000554945 RGL3Q3MIN7 710 aa14.04□□□□□ -0.16
SRP54-AS1-201ENST00000554945 FNBP4Q8N3X1 1017 aaPredicted RBP14.04□□□□□ -0.16
SRP54-AS1-201ENST00000554945 TRPC5Q9UL62 973 aaPredicted RBP14.04□□□□□ -0.16
SRP54-AS1-201ENST00000554945 ADGRF5Q8IZF2 1346 aa14.04□□□□□ -0.16
SRP54-AS1-201ENST00000554945 ANKRD30BQ9BXX2 1392 aa14.04□□□□□ -0.16
SRP54-AS1-201ENST00000554945 TECPR2O15040 1411 aa14.02□□□□□ -0.16
SRP54-AS1-201ENST00000554945 SPATA31E1Q6ZUB1 1445 aa14.02□□□□□ -0.16
SRP54-AS1-201ENST00000554945 LRPPRCP42704 1394 aaKnown RBP14.02□□□□□ -0.17
SRP54-AS1-201ENST00000554945 MPHOSPH9Q99550 1183 aa14.02□□□□□ -0.17
SRP54-AS1-201ENST00000554945 STK26Q9P289 416 aa14.02□□□□□ -0.17
SRP54-AS1-201ENST00000554945 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
SRP54-AS1-201ENST00000554945 MARF1Q9Y4F3 1742 aaKnown RBP14.01□□□□□ -0.17
SRP54-AS1-201ENST00000554945 ABCC11Q96J66 1382 aa14.01□□□□□ -0.17
SRP54-AS1-201ENST00000554945 FOXO3O43524 673 aa14.01□□□□□ -0.17
SRP54-AS1-201ENST00000554945 WAPLQ7Z5K2 1190 aa14.01□□□□□ -0.17
SRP54-AS1-201ENST00000554945 PXDNQ92626 1479 aa14□□□□□ -0.17
SRP54-AS1-201ENST00000554945 ACIN1Q9UKV3 1341 aaKnown RBP14□□□□□ -0.17
SRP54-AS1-201ENST00000554945 MYOM2P54296 1465 aa13.99□□□□□ -0.17
SRP54-AS1-201ENST00000554945 ATAD2Q6PL18 1390 aa13.99□□□□□ -0.17
SRP54-AS1-201ENST00000554945 TMEM132EQ6IEE7 984 aa13.99□□□□□ -0.17
SRP54-AS1-201ENST00000554945 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
SRP54-AS1-201ENST00000554945 ATRNO75882 1429 aa13.98□□□□□ -0.17
SRP54-AS1-201ENST00000554945 SIRT1Q96EB6 747 aa13.98□□□□□ -0.17
SRP54-AS1-201ENST00000554945 FMN2Q9NZ56 1722 aa13.98□□□□□ -0.17
SRP54-AS1-201ENST00000554945 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
SRP54-AS1-201ENST00000554945 XPCQ01831 940 aaPredicted RBP13.97□□□□□ -0.17
SRP54-AS1-201ENST00000554945 KIF1AQ12756 1690 aa13.97□□□□□ -0.17
SRP54-AS1-201ENST00000554945 YTHDC2Q9H6S0 1430 aaKnown RBP13.97□□□□□ -0.17
SRP54-AS1-201ENST00000554945 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.18
SRP54-AS1-201ENST00000554945 BCL9LQ86UU0 1499 aa13.95□□□□□ -0.18
SRP54-AS1-201ENST00000554945 C14orf93Q9H972 538 aaKnown RBP13.95□□□□□ -0.18
SRP54-AS1-201ENST00000554945 SPATA31A3Q5VYP0 1347 aa13.94□□□□□ -0.18
SRP54-AS1-201ENST00000554945 RGPD8O14715 1765 aaPredicted RBP13.94□□□□□ -0.18
SRP54-AS1-201ENST00000554945 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.94□□□□□ -0.18
SRP54-AS1-201ENST00000554945 DHX57Q6P158 1386 aaKnown RBP13.94□□□□□ -0.18
SRP54-AS1-201ENST00000554945 EP400Q96L91 3159 aa13.93□□□□□ -0.18
SRP54-AS1-201ENST00000554945 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
SRP54-AS1-201ENST00000554945 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
SRP54-AS1-201ENST00000554945 GJD4Q96KN9 370 aaPredicted RBP13.93□□□□□ -0.18
SRP54-AS1-201ENST00000554945 PSME1Q06323 249 aa13.92□□□□□ -0.18
SRP54-AS1-201ENST00000554945 NRXN1Q9ULB1 1477 aa13.92□□□□□ -0.18
SRP54-AS1-201ENST00000554945 UNC5CLQ8IV45 518 aa13.91□□□□□ -0.18
SRP54-AS1-201ENST00000554945 SLIT2O94813 1529 aa13.9□□□□□ -0.18
SRP54-AS1-201ENST00000554945 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
SRP54-AS1-201ENST00000554945 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
SRP54-AS1-201ENST00000554945 KCNA4P22459 653 aa13.89□□□□□ -0.19
SRP54-AS1-201ENST00000554945 USP32Q8NFA0 1604 aa13.89□□□□□ -0.19
SRP54-AS1-201ENST00000554945 HAP1P54257 671 aaPredicted RBP13.88□□□□□ -0.19
SRP54-AS1-201ENST00000554945 PRAM1Q96QH2 718 aa13.88□□□□□ -0.19
SRP54-AS1-201ENST00000554945 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
SRP54-AS1-201ENST00000554945 TNS3Q68CZ2 1445 aa13.88□□□□□ -0.19
SRP54-AS1-201ENST00000554945 GLI3P10071 1580 aa13.88□□□□□ -0.19
SRP54-AS1-201ENST00000554945 SBNO1A3KN83 1393 aa13.87□□□□□ -0.19
SRP54-AS1-201ENST00000554945 DLC1Q96QB1 1528 aa13.87□□□□□ -0.19
SRP54-AS1-201ENST00000554945 POGKQ9P215 609 aa13.87□□□□□ -0.19
SRP54-AS1-201ENST00000554945 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
SRP54-AS1-201ENST00000554945 SAFB2Q14151 953 aaKnown RBP eCLIP13.86□□□□□ -0.19
SRP54-AS1-201ENST00000554945 NWD2Q9ULI1 1742 aa13.86□□□□□ -0.19
SRP54-AS1-201ENST00000554945 SRCAPQ6ZRS2 3230 aa13.86□□□□□ -0.19
SRP54-AS1-201ENST00000554945 BRWD3Q6RI45 1802 aa13.85□□□□□ -0.19
SRP54-AS1-201ENST00000554945 ARHGEF10O15013 1369 aa13.85□□□□□ -0.19
SRP54-AS1-201ENST00000554945 LMOD2Q6P5Q4 547 aa13.85□□□□□ -0.19
SRP54-AS1-201ENST00000554945 CABLES1Q8TDN4 633 aa13.85□□□□□ -0.19
SRP54-AS1-201ENST00000554945 ANKARQ7Z5J8 1434 aa13.84□□□□□ -0.19
SRP54-AS1-201ENST00000554945 VPS72Q15906 364 aa13.84□□□□□ -0.19
SRP54-AS1-201ENST00000554945 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
SRP54-AS1-201ENST00000554945 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
SRP54-AS1-201ENST00000554945 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
SRP54-AS1-201ENST00000554945 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.19
SRP54-AS1-201ENST00000554945 ADGRB2O60241 1585 aa13.83□□□□□ -0.19
SRP54-AS1-201ENST00000554945 PMFBP1Q8TBY8 1022 aa13.83□□□□□ -0.2
SRP54-AS1-201ENST00000554945 BLMP54132 1417 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms