RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 QTRT2Q9H974 415 aaKnown RBP16.68■□□□□ 0.26
NPC2-205ENST00000554482 RGS12O14924 1447 aa16.68■□□□□ 0.26
NPC2-205ENST00000554482 SOS2Q07890 1332 aaPredicted RBP16.68■□□□□ 0.26
NPC2-205ENST00000554482 STK26Q9P289 416 aa16.67■□□□□ 0.26
NPC2-205ENST00000554482 IFT172Q9UG01 1749 aa16.67■□□□□ 0.26
NPC2-205ENST00000554482 RBM6P78332 1123 aaKnown RBP16.66■□□□□ 0.26
NPC2-205ENST00000554482 ESCO1Q5FWF5 840 aa16.66■□□□□ 0.26
NPC2-205ENST00000554482 ANKRD30BQ9BXX2 1392 aa16.65■□□□□ 0.26
NPC2-205ENST00000554482 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
NPC2-205ENST00000554482 MPHOSPH9Q99550 1183 aa16.65■□□□□ 0.26
NPC2-205ENST00000554482 NPHP3Q7Z494 1330 aa16.65■□□□□ 0.26
NPC2-205ENST00000554482 NUTM2FA1L443 756 aa16.64■□□□□ 0.25
NPC2-205ENST00000554482 COL22A1Q8NFW1 1626 aaPredicted RBP16.63■□□□□ 0.25
NPC2-205ENST00000554482 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
NPC2-205ENST00000554482 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
NPC2-205ENST00000554482 USP21Q9UK80 565 aa16.63■□□□□ 0.25
NPC2-205ENST00000554482 TECPR2O15040 1411 aa16.62■□□□□ 0.25
NPC2-205ENST00000554482 KNDC1Q76NI1 1749 aa16.62■□□□□ 0.25
NPC2-205ENST00000554482 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
NPC2-205ENST00000554482 LRPPRCP42704 1394 aaKnown RBP16.62■□□□□ 0.25
NPC2-205ENST00000554482 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
NPC2-205ENST00000554482 PXDNQ92626 1479 aa16.61■□□□□ 0.25
NPC2-205ENST00000554482 PLEKHH1Q9ULM0 1364 aa16.61■□□□□ 0.25
NPC2-205ENST00000554482 FOXO3O43524 673 aa16.6■□□□□ 0.25
NPC2-205ENST00000554482 TRPC5Q9UL62 973 aaPredicted RBP16.59■□□□□ 0.25
NPC2-205ENST00000554482 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
NPC2-205ENST00000554482 MYOM2P54296 1465 aa16.59■□□□□ 0.25
NPC2-205ENST00000554482 FMN2Q9NZ56 1722 aa16.59■□□□□ 0.25
NPC2-205ENST00000554482 ABCC11Q96J66 1382 aa16.58■□□□□ 0.24
NPC2-205ENST00000554482 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
NPC2-205ENST00000554482 KIF1AQ12756 1690 aa16.56■□□□□ 0.24
NPC2-205ENST00000554482 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
NPC2-205ENST00000554482 MSH5O43196 834 aa16.56■□□□□ 0.24
NPC2-205ENST00000554482 FNBP4Q8N3X1 1017 aaPredicted RBP16.56■□□□□ 0.24
NPC2-205ENST00000554482 ATRNO75882 1429 aa16.55■□□□□ 0.24
NPC2-205ENST00000554482 ACIN1Q9UKV3 1341 aaKnown RBP16.52■□□□□ 0.24
NPC2-205ENST00000554482 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.24
NPC2-205ENST00000554482 CFAP70Q5T0N1 1121 aa16.52■□□□□ 0.24
NPC2-205ENST00000554482 BCL9LQ86UU0 1499 aa16.52■□□□□ 0.23
NPC2-205ENST00000554482 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
NPC2-205ENST00000554482 NRXN1Q9ULB1 1477 aa16.51■□□□□ 0.23
NPC2-205ENST00000554482 PLEKHG5O94827 1062 aa16.51■□□□□ 0.23
NPC2-205ENST00000554482 HAP1P54257 671 aaPredicted RBP16.51■□□□□ 0.23
NPC2-205ENST00000554482 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
NPC2-205ENST00000554482 SPATA31A3Q5VYP0 1347 aa16.5■□□□□ 0.23
NPC2-205ENST00000554482 KRT28Q7Z3Y7 464 aa16.5■□□□□ 0.23
NPC2-205ENST00000554482 RGPD8O14715 1765 aaPredicted RBP16.5■□□□□ 0.23
NPC2-205ENST00000554482 RAB3GAP2Q9H2M9 1393 aa16.5■□□□□ 0.23
NPC2-205ENST00000554482 USP32Q8NFA0 1604 aa16.49■□□□□ 0.23
NPC2-205ENST00000554482 PRAM1Q96QH2 718 aa16.49■□□□□ 0.23
NPC2-205ENST00000554482 PHF8Q9UPP1 1060 aa16.49■□□□□ 0.23
NPC2-205ENST00000554482 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.48■□□□□ 0.23
NPC2-205ENST00000554482 TNS3Q68CZ2 1445 aa16.48■□□□□ 0.23
NPC2-205ENST00000554482 POGKQ9P215 609 aa16.48■□□□□ 0.23
NPC2-205ENST00000554482 LMOD2Q6P5Q4 547 aa16.47■□□□□ 0.23
NPC2-205ENST00000554482 SIRT1Q96EB6 747 aa16.47■□□□□ 0.23
NPC2-205ENST00000554482 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
NPC2-205ENST00000554482 PSME1Q06323 249 aa16.46■□□□□ 0.23
NPC2-205ENST00000554482 SLIT2O94813 1529 aa16.45■□□□□ 0.22
NPC2-205ENST00000554482 UNC5CLQ8IV45 518 aa16.45■□□□□ 0.22
NPC2-205ENST00000554482 DLC1Q96QB1 1528 aa16.45■□□□□ 0.22
NPC2-205ENST00000554482 RALGAPBQ86X10 1494 aa16.44■□□□□ 0.22
NPC2-205ENST00000554482 CABLES1Q8TDN4 633 aa16.44■□□□□ 0.22
NPC2-205ENST00000554482 GLI3P10071 1580 aa16.43■□□□□ 0.22
NPC2-205ENST00000554482 ABCA3Q99758 1704 aa16.43■□□□□ 0.22
NPC2-205ENST00000554482 PMFBP1Q8TBY8 1022 aa16.43■□□□□ 0.22
NPC2-205ENST00000554482 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
NPC2-205ENST00000554482 ADGRB2O60241 1585 aa16.43■□□□□ 0.22
NPC2-205ENST00000554482 ARHGEF10O15013 1369 aa16.42■□□□□ 0.22
NPC2-205ENST00000554482 HIRIP3Q9BW71 556 aaPredicted RBP16.42■□□□□ 0.22
NPC2-205ENST00000554482 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
NPC2-205ENST00000554482 KDM2AQ9Y2K7 1162 aa16.42■□□□□ 0.22
NPC2-205ENST00000554482 ANKARQ7Z5J8 1434 aa16.42■□□□□ 0.22
NPC2-205ENST00000554482 ADGRB1O14514 1584 aa16.42■□□□□ 0.22
NPC2-205ENST00000554482 SBNO1A3KN83 1393 aa16.41■□□□□ 0.22
NPC2-205ENST00000554482 CCDC9Q9Y3X0 531 aaKnown RBP16.41■□□□□ 0.22
NPC2-205ENST00000554482 DCAF11Q8TEB1 546 aa16.4■□□□□ 0.22
NPC2-205ENST00000554482 MINK1Q8N4C8 1332 aaPredicted RBP16.4■□□□□ 0.22
NPC2-205ENST00000554482 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
NPC2-205ENST00000554482 NWD2Q9ULI1 1742 aa16.39■□□□□ 0.21
NPC2-205ENST00000554482 CCDC125Q86Z20 511 aa16.38■□□□□ 0.21
NPC2-205ENST00000554482 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
NPC2-205ENST00000554482 EIF3AQ14152 1382 aaKnown RBP16.38■□□□□ 0.21
NPC2-205ENST00000554482 TULP4Q9NRJ4 1543 aa16.37■□□□□ 0.21
NPC2-205ENST00000554482 A0A0G2JS52 829 aa16.37■□□□□ 0.21
NPC2-205ENST00000554482 MYT1Q01538 1121 aa16.37■□□□□ 0.21
NPC2-205ENST00000554482 GPRASP1Q5JY77 1395 aa16.37■□□□□ 0.21
NPC2-205ENST00000554482 TRPM3Q9HCF6 1732 aaPredicted RBP16.36■□□□□ 0.21
NPC2-205ENST00000554482 VPS72Q15906 364 aa16.36■□□□□ 0.21
NPC2-205ENST00000554482 EP400Q96L91 3159 aa16.36■□□□□ 0.21
NPC2-205ENST00000554482 BLMP54132 1417 aaPredicted RBP16.36■□□□□ 0.21
NPC2-205ENST00000554482 SEPT12Q8IYM1 358 aa16.35■□□□□ 0.21
NPC2-205ENST00000554482 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
NPC2-205ENST00000554482 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
NPC2-205ENST00000554482 ARHGEF28Q8N1W1 1705 aaKnown RBP16.33■□□□□ 0.21
NPC2-205ENST00000554482 WASLO00401 505 aaPredicted RBP16.33■□□□□ 0.2
NPC2-205ENST00000554482 SF3B2Q13435 895 aaKnown RBP16.33■□□□□ 0.2
NPC2-205ENST00000554482 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.2
NPC2-205ENST00000554482 NRAPQ86VF7 1730 aa16.33■□□□□ 0.2
NPC2-205ENST00000554482 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms