RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 ADAMTS12P58397 1594 aa10.52□□□□□ -0.73
ATXN3-226ENST00000554350 ABCA5Q8WWZ7 1642 aa10.51□□□□□ -0.73
ATXN3-226ENST00000554350 BLOC1S3Q6QNY0 202 aa10.51□□□□□ -0.73
ATXN3-226ENST00000554350 PRKD2Q9BZL6 878 aa10.51□□□□□ -0.73
ATXN3-226ENST00000554350 HIC1Q14526 733 aa10.5□□□□□ -0.73
ATXN3-226ENST00000554350 PCDHB3Q9Y5E6 796 aa10.5□□□□□ -0.73
ATXN3-226ENST00000554350 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.49□□□□□ -0.73
ATXN3-226ENST00000554350 LCE2BO14633 110 aa10.49□□□□□ -0.73
ATXN3-226ENST00000554350 SLC4A3P48751 1232 aa10.49□□□□□ -0.73
ATXN3-226ENST00000554350 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
ATXN3-226ENST00000554350 ACTN4O43707 911 aaKnown RBP10.48□□□□□ -0.73
ATXN3-226ENST00000554350 METTL3Q86U44 580 aaKnown RBP10.48□□□□□ -0.73
ATXN3-226ENST00000554350 TTBK1Q5TCY1 1321 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-226ENST00000554350 TLL1O43897 1013 aa10.47□□□□□ -0.73
ATXN3-226ENST00000554350 CFHP08603 1231 aa10.47□□□□□ -0.73
ATXN3-226ENST00000554350 V9GY48 417 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-226ENST00000554350 FHAD1B1AJZ9 1412 aa10.47□□□□□ -0.73
ATXN3-226ENST00000554350 ABCA10Q8WWZ4 1543 aa10.47□□□□□ -0.73
ATXN3-226ENST00000554350 SPATA31D1Q6ZQQ2 1576 aa10.47□□□□□ -0.73
ATXN3-226ENST00000554350 OATP04181 439 aa10.46□□□□□ -0.73
ATXN3-226ENST00000554350 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.73
ATXN3-226ENST00000554350 COL17A1Q9UMD9 1497 aaPredicted RBP10.46□□□□□ -0.74
ATXN3-226ENST00000554350 PPRC1Q5VV67 1664 aaKnown RBP10.46□□□□□ -0.74
ATXN3-226ENST00000554350 GNPATO15228 680 aa10.45□□□□□ -0.74
ATXN3-226ENST00000554350 EMID1Q96A84 441 aaPredicted RBP10.45□□□□□ -0.74
ATXN3-226ENST00000554350 Q6ZNB5 142 aa10.44□□□□□ -0.74
ATXN3-226ENST00000554350 KMT5BQ4FZB7 885 aa10.43□□□□□ -0.74
ATXN3-226ENST00000554350 SMYD5Q6GMV2 418 aa10.43□□□□□ -0.74
ATXN3-226ENST00000554350 TMUB1Q9BVT8 246 aa10.43□□□□□ -0.74
ATXN3-226ENST00000554350 GFRA3O60609 400 aa10.42□□□□□ -0.74
ATXN3-226ENST00000554350 ASXL2Q76L83 1435 aa10.41□□□□□ -0.74
ATXN3-226ENST00000554350 RNF223E7ERA6 249 aa10.41□□□□□ -0.74
ATXN3-226ENST00000554350 LAPTM4AQ15012 233 aa10.41□□□□□ -0.74
ATXN3-226ENST00000554350 PHOX2BQ99453 314 aa10.41□□□□□ -0.74
ATXN3-226ENST00000554350 TEX14Q8IWB6 1497 aa10.41□□□□□ -0.74
ATXN3-226ENST00000554350 GGCXP38435 758 aa10.4□□□□□ -0.74
ATXN3-226ENST00000554350 NLRP7Q8WX94 980 aa10.4□□□□□ -0.74
ATXN3-226ENST00000554350 PLB1Q6P1J6 1458 aa10.39□□□□□ -0.75
ATXN3-226ENST00000554350 GLI2P10070 1586 aa10.39□□□□□ -0.75
ATXN3-226ENST00000554350 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
ATXN3-226ENST00000554350 NRG2O14511 850 aaPredicted RBP10.37□□□□□ -0.75
ATXN3-226ENST00000554350 S1PR4O95977 384 aa10.37□□□□□ -0.75
ATXN3-226ENST00000554350 KIF21BO75037 1637 aa10.36□□□□□ -0.75
ATXN3-226ENST00000554350 PCF11O94913 1555 aaKnown RBP10.36□□□□□ -0.75
ATXN3-226ENST00000554350 PPEF1O14829 653 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-226ENST00000554350 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-226ENST00000554350 PTPRMP28827 1452 aa10.36□□□□□ -0.75
ATXN3-226ENST00000554350 ADH1BP00325 375 aa10.35□□□□□ -0.75
ATXN3-226ENST00000554350 PUS10Q3MIT2 529 aaKnown RBP10.35□□□□□ -0.75
ATXN3-226ENST00000554350 TRIM67Q6ZTA4 783 aa10.35□□□□□ -0.75
ATXN3-226ENST00000554350 PTPRGP23470 1445 aa10.34□□□□□ -0.75
ATXN3-226ENST00000554350 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.75
ATXN3-226ENST00000554350 ABCC2Q92887 1545 aa10.34□□□□□ -0.75
ATXN3-226ENST00000554350 NR1I2O75469 434 aa10.34□□□□□ -0.75
ATXN3-226ENST00000554350 HSPA2P54652 639 aa10.34□□□□□ -0.75
ATXN3-226ENST00000554350 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
ATXN3-226ENST00000554350 SCUBE3Q8IX30 993 aa10.34□□□□□ -0.75
ATXN3-226ENST00000554350 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
ATXN3-226ENST00000554350 ERICH3Q5RHP9 1530 aa10.33□□□□□ -0.76
ATXN3-226ENST00000554350 MAP3K4Q9Y6R4 1608 aa10.33□□□□□ -0.76
ATXN3-226ENST00000554350 CUL7Q14999 1698 aa10.32□□□□□ -0.76
ATXN3-226ENST00000554350 TRAF7Q6Q0C0 670 aa10.32□□□□□ -0.76
ATXN3-226ENST00000554350 LIAT1Q6ZQX7 453 aa10.32□□□□□ -0.76
ATXN3-226ENST00000554350 PDZRN3Q9UPQ7 1066 aa10.32□□□□□ -0.76
ATXN3-226ENST00000554350 EPRSP07814 1512 aaKnown RBP10.32□□□□□ -0.76
ATXN3-226ENST00000554350 SLC19A1P41440 591 aa10.31□□□□□ -0.76
ATXN3-226ENST00000554350 PLA2G2CQ5R387 149 aa10.31□□□□□ -0.76
ATXN3-226ENST00000554350 DDX11L8A8MPP1 907 aa10.3□□□□□ -0.76
ATXN3-226ENST00000554350 MORN1Q5T089 497 aa10.3□□□□□ -0.76
ATXN3-226ENST00000554350 SPRYD7Q5W111 196 aa10.3□□□□□ -0.76
ATXN3-226ENST00000554350 FUT2Q10981 343 aa10.29□□□□□ -0.76
ATXN3-226ENST00000554350 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
ATXN3-226ENST00000554350 RDH13Q8NBN7 331 aa10.29□□□□□ -0.76
ATXN3-226ENST00000554350 THAP11Q96EK4 314 aa10.29□□□□□ -0.76
ATXN3-226ENST00000554350 SLC6A16Q9GZN6 736 aa10.29□□□□□ -0.76
ATXN3-226ENST00000554350 GCGRP47871 477 aa10.28□□□□□ -0.76
ATXN3-226ENST00000554350 RSPH4AQ5TD94 716 aa10.28□□□□□ -0.76
ATXN3-226ENST00000554350 ARID4BQ4LE39 1312 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-226ENST00000554350 SPSB2Q99619 263 aa10.27□□□□□ -0.77
ATXN3-226ENST00000554350 KIAA0586Q9BVV6 1533 aa10.27□□□□□ -0.77
ATXN3-226ENST00000554350 ZNF598Q86UK7 904 aaKnown RBP10.26□□□□□ -0.77
ATXN3-226ENST00000554350 TNIKQ9UKE5 1360 aa10.26□□□□□ -0.77
ATXN3-226ENST00000554350 ADAMTSL3P82987 1691 aa10.25□□□□□ -0.77
ATXN3-226ENST00000554350 MAP2K5Q13163 448 aa10.25□□□□□ -0.77
ATXN3-226ENST00000554350 SLC27A5Q9Y2P5 690 aa10.25□□□□□ -0.77
ATXN3-226ENST00000554350 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
ATXN3-226ENST00000554350 PRR20EP86478 221 aa10.23□□□□□ -0.77
ATXN3-226ENST00000554350 PRR20CP86479 221 aa10.23□□□□□ -0.77
ATXN3-226ENST00000554350 PRR20DP86480 221 aa10.23□□□□□ -0.77
ATXN3-226ENST00000554350 PRR20BP86481 221 aa10.23□□□□□ -0.77
ATXN3-226ENST00000554350 PRR20AP86496 221 aa10.23□□□□□ -0.77
ATXN3-226ENST00000554350 SULF1Q8IWU6 871 aa10.23□□□□□ -0.77
ATXN3-226ENST00000554350 FAM160A2Q8N612 972 aaPredicted RBP10.23□□□□□ -0.77
ATXN3-226ENST00000554350 CARMIL2Q6F5E8 1435 aa10.23□□□□□ -0.77
ATXN3-226ENST00000554350 MADDQ8WXG6 1647 aa10.22□□□□□ -0.77
ATXN3-226ENST00000554350 IRF6O14896 467 aa10.22□□□□□ -0.77
ATXN3-226ENST00000554350 GDF9O60383 454 aa10.22□□□□□ -0.77
ATXN3-226ENST00000554350 CD109Q6YHK3 1445 aa10.22□□□□□ -0.77
ATXN3-226ENST00000554350 UACAQ9BZF9 1416 aa10.22□□□□□ -0.77
ATXN3-226ENST00000554350 ZNF697Q5TEC3 545 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 506.2 ms