RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SHPRHQ149N8 1683 aa19■□□□□ 0.63
SHMT2-211ENST00000554310 KIAA1210Q9ULL0 1709 aa19■□□□□ 0.63
SHMT2-211ENST00000554310 JCADQ9P266 1359 aa18.99■□□□□ 0.63
SHMT2-211ENST00000554310 SIRT1Q96EB6 747 aa18.99■□□□□ 0.63
SHMT2-211ENST00000554310 FMN2Q9NZ56 1722 aa18.98■□□□□ 0.63
SHMT2-211ENST00000554310 KDM2AQ9Y2K7 1162 aa18.98■□□□□ 0.63
SHMT2-211ENST00000554310 PLEKHH1Q9ULM0 1364 aa18.97■□□□□ 0.63
SHMT2-211ENST00000554310 WAPLQ7Z5K2 1190 aa18.96■□□□□ 0.63
SHMT2-211ENST00000554310 ADGRB2O60241 1585 aa18.96■□□□□ 0.63
SHMT2-211ENST00000554310 ARHGEF28Q8N1W1 1705 aaKnown RBP18.93■□□□□ 0.62
SHMT2-211ENST00000554310 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
SHMT2-211ENST00000554310 KIF1AQ12756 1690 aa18.92■□□□□ 0.62
SHMT2-211ENST00000554310 PRAM1Q96QH2 718 aa18.91■□□□□ 0.62
SHMT2-211ENST00000554310 SPATA31A6Q5VVP1 1343 aa18.91■□□□□ 0.62
SHMT2-211ENST00000554310 ORAI2Q96SN7 254 aa18.89■□□□□ 0.61
SHMT2-211ENST00000554310 POGKQ9P215 609 aa18.88■□□□□ 0.61
SHMT2-211ENST00000554310 LRP6O75581 1613 aa18.87■□□□□ 0.61
SHMT2-211ENST00000554310 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
SHMT2-211ENST00000554310 TRAK1Q9UPV9 953 aa18.87■□□□□ 0.61
SHMT2-211ENST00000554310 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
SHMT2-211ENST00000554310 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
SHMT2-211ENST00000554310 SOS2Q07890 1332 aaPredicted RBP18.85■□□□□ 0.61
SHMT2-211ENST00000554310 NPHP3Q7Z494 1330 aa18.85■□□□□ 0.61
SHMT2-211ENST00000554310 SAFB2Q14151 953 aaKnown RBP eCLIP18.85■□□□□ 0.61
SHMT2-211ENST00000554310 ESCO1Q5FWF5 840 aa18.85■□□□□ 0.61
SHMT2-211ENST00000554310 DDX17Q92841 729 aaKnown RBP18.85■□□□□ 0.61
SHMT2-211ENST00000554310 SIN3AQ96ST3 1273 aa18.85■□□□□ 0.61
SHMT2-211ENST00000554310 RGPD8O14715 1765 aaPredicted RBP18.85■□□□□ 0.61
SHMT2-211ENST00000554310 PXDNQ92626 1479 aa18.84■□□□□ 0.61
SHMT2-211ENST00000554310 EIF3AQ14152 1382 aaKnown RBP18.84■□□□□ 0.61
SHMT2-211ENST00000554310 PNPLA6Q8IY17 1366 aa18.84■□□□□ 0.61
SHMT2-211ENST00000554310 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
SHMT2-211ENST00000554310 TRPM1Q7Z4N2 1603 aa18.84■□□□□ 0.61
SHMT2-211ENST00000554310 USP32Q8NFA0 1604 aa18.84■□□□□ 0.61
SHMT2-211ENST00000554310 COL22A1Q8NFW1 1626 aaPredicted RBP18.82■□□□□ 0.6
SHMT2-211ENST00000554310 NUTM2FA1L443 756 aa18.82■□□□□ 0.6
SHMT2-211ENST00000554310 TULP4Q9NRJ4 1543 aa18.82■□□□□ 0.6
SHMT2-211ENST00000554310 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
SHMT2-211ENST00000554310 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
SHMT2-211ENST00000554310 MINK1Q8N4C8 1332 aaPredicted RBP18.79■□□□□ 0.6
SHMT2-211ENST00000554310 FOXO3O43524 673 aa18.78■□□□□ 0.6
SHMT2-211ENST00000554310 RGS17Q9UGC6 210 aaPredicted RBP18.78■□□□□ 0.6
SHMT2-211ENST00000554310 NBPF1Q3BBV0 1214 aa18.77■□□□□ 0.6
SHMT2-211ENST00000554310 MEX3CQ5U5Q3 659 aaKnown RBP18.77■□□□□ 0.6
SHMT2-211ENST00000554310 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
SHMT2-211ENST00000554310 PHF8Q9UPP1 1060 aa18.76■□□□□ 0.59
SHMT2-211ENST00000554310 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
SHMT2-211ENST00000554310 WASLO00401 505 aaPredicted RBP18.75■□□□□ 0.59
SHMT2-211ENST00000554310 TONSLQ96HA7 1378 aa18.75■□□□□ 0.59
SHMT2-211ENST00000554310 ATP7BP35670 1465 aa18.75■□□□□ 0.59
SHMT2-211ENST00000554310 TOPAZ1Q8N9V7 1692 aa18.74■□□□□ 0.59
SHMT2-211ENST00000554310 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-211ENST00000554310 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-211ENST00000554310 NUTM2AQ8IVF1 878 aaPredicted RBP18.74■□□□□ 0.59
SHMT2-211ENST00000554310 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
SHMT2-211ENST00000554310 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
SHMT2-211ENST00000554310 TNS3Q68CZ2 1445 aa18.72■□□□□ 0.59
SHMT2-211ENST00000554310 PRR36Q9H6K5 1346 aa18.72■□□□□ 0.59
SHMT2-211ENST00000554310 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
SHMT2-211ENST00000554310 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
SHMT2-211ENST00000554310 GPRASP1Q5JY77 1395 aa18.71■□□□□ 0.59
SHMT2-211ENST00000554310 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
SHMT2-211ENST00000554310 SBNO1A3KN83 1393 aa18.7■□□□□ 0.58
SHMT2-211ENST00000554310 ZNF772Q68DY9 489 aaPredicted RBP18.7■□□□□ 0.58
SHMT2-211ENST00000554310 TRPM3Q9HCF6 1732 aaPredicted RBP18.7■□□□□ 0.58
SHMT2-211ENST00000554310 SPATA31A3Q5VYP0 1347 aa18.7■□□□□ 0.58
SHMT2-211ENST00000554310 PSME1Q06323 249 aa18.69■□□□□ 0.58
SHMT2-211ENST00000554310 KRT28Q7Z3Y7 464 aa18.69■□□□□ 0.58
SHMT2-211ENST00000554310 POTEAQ6S8J7 498 aa18.68■□□□□ 0.58
SHMT2-211ENST00000554310 ABCA3Q99758 1704 aa18.68■□□□□ 0.58
SHMT2-211ENST00000554310 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
SHMT2-211ENST00000554310 ARHGEF10O15013 1369 aa18.67■□□□□ 0.58
SHMT2-211ENST00000554310 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
SHMT2-211ENST00000554310 CDK19Q9BWU1 502 aa18.66■□□□□ 0.58
SHMT2-211ENST00000554310 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
SHMT2-211ENST00000554310 NUDT16Q96DE0 195 aaKnown RBP18.65■□□□□ 0.58
SHMT2-211ENST00000554310 C8orf37Q96NL8 207 aa18.65■□□□□ 0.58
SHMT2-211ENST00000554310 AFF2P51816 1311 aa18.65■□□□□ 0.58
SHMT2-211ENST00000554310 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
SHMT2-211ENST00000554310 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
SHMT2-211ENST00000554310 NGDNQ8NEJ9 315 aaKnown RBP18.62■□□□□ 0.57
SHMT2-211ENST00000554310 POLR3AO14802 1390 aaPredicted RBP18.62■□□□□ 0.57
SHMT2-211ENST00000554310 NGLY1Q96IV0 654 aa18.61■□□□□ 0.57
SHMT2-211ENST00000554310 CCDC61Q9Y6R9 512 aa18.61■□□□□ 0.57
SHMT2-211ENST00000554310 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
SHMT2-211ENST00000554310 SRPK2P78362 688 aaKnown RBP18.6■□□□□ 0.57
SHMT2-211ENST00000554310 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.6■□□□□ 0.57
SHMT2-211ENST00000554310 CRYBG1Q9Y4K1 1723 aa18.6■□□□□ 0.57
SHMT2-211ENST00000554310 CDK12Q9NYV4 1490 aaPredicted RBP18.59■□□□□ 0.57
SHMT2-211ENST00000554310 PPIP5K1Q6PFW1 1433 aa18.59■□□□□ 0.57
SHMT2-211ENST00000554310 CARD11Q9BXL7 1154 aa18.59■□□□□ 0.57
SHMT2-211ENST00000554310 EVC2Q86UK5 1308 aa18.58■□□□□ 0.57
SHMT2-211ENST00000554310 PLEKHG3A1L390 1219 aa18.57■□□□□ 0.56
SHMT2-211ENST00000554310 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
SHMT2-211ENST00000554310 FNBP4Q8N3X1 1017 aaPredicted RBP18.57■□□□□ 0.56
SHMT2-211ENST00000554310 PLCH1Q4KWH8 1693 aa18.57■□□□□ 0.56
SHMT2-211ENST00000554310 HAP1P54257 671 aaPredicted RBP18.56■□□□□ 0.56
SHMT2-211ENST00000554310 CABP2Q9NPB3 220 aa18.56■□□□□ 0.56
SHMT2-211ENST00000554310 NWD2Q9ULI1 1742 aa18.56■□□□□ 0.56
SHMT2-211ENST00000554310 ACEP12821 1306 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms