RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 FOXD1Q16676 465 aa18.9■□□□□ 0.62
XRCC3-206ENST00000554170 VGFO15240 615 aaPredicted RBP18.89■□□□□ 0.61
XRCC3-206ENST00000554170 ORAI2Q96SN7 254 aa18.89■□□□□ 0.61
XRCC3-206ENST00000554170 MARF1Q9Y4F3 1742 aaKnown RBP18.88■□□□□ 0.61
XRCC3-206ENST00000554170 SRCAPQ6ZRS2 3230 aa18.87■□□□□ 0.61
XRCC3-206ENST00000554170 ATAD2Q6PL18 1390 aa18.87■□□□□ 0.61
XRCC3-206ENST00000554170 USP21Q9UK80 565 aa18.86■□□□□ 0.61
XRCC3-206ENST00000554170 RPGRIP1LQ68CZ1 1315 aa18.85■□□□□ 0.61
XRCC3-206ENST00000554170 TRPC5Q9UL62 973 aaPredicted RBP18.85■□□□□ 0.61
XRCC3-206ENST00000554170 CDC42BPGQ6DT37 1551 aa18.85■□□□□ 0.61
XRCC3-206ENST00000554170 FNBP4Q8N3X1 1017 aaPredicted RBP18.84■□□□□ 0.61
XRCC3-206ENST00000554170 EP400Q96L91 3159 aa18.84■□□□□ 0.61
XRCC3-206ENST00000554170 CCDC144AA2RUR9 1427 aa18.83■□□□□ 0.61
XRCC3-206ENST00000554170 ATRNO75882 1429 aa18.83■□□□□ 0.61
XRCC3-206ENST00000554170 MYOM2P54296 1465 aa18.83■□□□□ 0.6
XRCC3-206ENST00000554170 PXDNQ92626 1479 aa18.81■□□□□ 0.6
XRCC3-206ENST00000554170 NPHP3Q7Z494 1330 aa18.8■□□□□ 0.6
XRCC3-206ENST00000554170 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.78■□□□□ 0.6
XRCC3-206ENST00000554170 ESCO1Q5FWF5 840 aa18.78■□□□□ 0.6
XRCC3-206ENST00000554170 BCL9LQ86UU0 1499 aa18.77■□□□□ 0.6
XRCC3-206ENST00000554170 KNDC1Q76NI1 1749 aa18.76■□□□□ 0.59
XRCC3-206ENST00000554170 IFT172Q9UG01 1749 aa18.76■□□□□ 0.59
XRCC3-206ENST00000554170 TECPR2O15040 1411 aa18.74■□□□□ 0.59
XRCC3-206ENST00000554170 FOXO3O43524 673 aa18.74■□□□□ 0.59
XRCC3-206ENST00000554170 LRPPRCP42704 1394 aaKnown RBP18.73■□□□□ 0.59
XRCC3-206ENST00000554170 ANKRD30BQ9BXX2 1392 aa18.73■□□□□ 0.59
XRCC3-206ENST00000554170 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
XRCC3-206ENST00000554170 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
XRCC3-206ENST00000554170 FMN2Q9NZ56 1722 aa18.73■□□□□ 0.59
XRCC3-206ENST00000554170 KIF1AQ12756 1690 aa18.73■□□□□ 0.59
XRCC3-206ENST00000554170 ADGRF5Q8IZF2 1346 aa18.72■□□□□ 0.59
XRCC3-206ENST00000554170 CCDC125Q86Z20 511 aa18.71■□□□□ 0.59
XRCC3-206ENST00000554170 GJD4Q96KN9 370 aaPredicted RBP18.71■□□□□ 0.59
XRCC3-206ENST00000554170 ZRANB1Q9UGI0 708 aa18.71■□□□□ 0.59
XRCC3-206ENST00000554170 BRWD3Q6RI45 1802 aa18.7■□□□□ 0.58
XRCC3-206ENST00000554170 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
XRCC3-206ENST00000554170 GLI3P10071 1580 aa18.69■□□□□ 0.58
XRCC3-206ENST00000554170 SPATA31E1Q6ZUB1 1445 aa18.69■□□□□ 0.58
XRCC3-206ENST00000554170 WAPLQ7Z5K2 1190 aa18.69■□□□□ 0.58
XRCC3-206ENST00000554170 STK26Q9P289 416 aa18.69■□□□□ 0.58
XRCC3-206ENST00000554170 USP32Q8NFA0 1604 aa18.69■□□□□ 0.58
XRCC3-206ENST00000554170 ABCC11Q96J66 1382 aa18.68■□□□□ 0.58
XRCC3-206ENST00000554170 NUTM2FA1L443 756 aa18.68■□□□□ 0.58
XRCC3-206ENST00000554170 SLIT2O94813 1529 aa18.68■□□□□ 0.58
XRCC3-206ENST00000554170 PLEKHH1Q9ULM0 1364 aa18.68■□□□□ 0.58
XRCC3-206ENST00000554170 RALGAPBQ86X10 1494 aa18.67■□□□□ 0.58
XRCC3-206ENST00000554170 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
XRCC3-206ENST00000554170 UNC5CLQ8IV45 518 aa18.66■□□□□ 0.58
XRCC3-206ENST00000554170 SPATA31A3Q5VYP0 1347 aa18.66■□□□□ 0.58
XRCC3-206ENST00000554170 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
XRCC3-206ENST00000554170 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.57
XRCC3-206ENST00000554170 BLMP54132 1417 aaPredicted RBP18.64■□□□□ 0.57
XRCC3-206ENST00000554170 YTHDC2Q9H6S0 1430 aaKnown RBP18.64■□□□□ 0.57
XRCC3-206ENST00000554170 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
XRCC3-206ENST00000554170 ABCA3Q99758 1704 aa18.63■□□□□ 0.57
XRCC3-206ENST00000554170 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
XRCC3-206ENST00000554170 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
XRCC3-206ENST00000554170 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
XRCC3-206ENST00000554170 KRT28Q7Z3Y7 464 aa18.6■□□□□ 0.57
XRCC3-206ENST00000554170 SIRT1Q96EB6 747 aa18.58■□□□□ 0.56
XRCC3-206ENST00000554170 STAC3Q96MF2 364 aa18.58■□□□□ 0.56
XRCC3-206ENST00000554170 DCAF11Q8TEB1 546 aa18.57■□□□□ 0.56
XRCC3-206ENST00000554170 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
XRCC3-206ENST00000554170 NRXN1Q9ULB1 1477 aa18.57■□□□□ 0.56
XRCC3-206ENST00000554170 HAP1P54257 671 aaPredicted RBP18.56■□□□□ 0.56
XRCC3-206ENST00000554170 PSME1Q06323 249 aa18.56■□□□□ 0.56
XRCC3-206ENST00000554170 VPS72Q15906 364 aa18.56■□□□□ 0.56
XRCC3-206ENST00000554170 KDM2AQ9Y2K7 1162 aa18.56■□□□□ 0.56
XRCC3-206ENST00000554170 SBNO1A3KN83 1393 aa18.55■□□□□ 0.56
XRCC3-206ENST00000554170 SEPT12Q8IYM1 358 aa18.55■□□□□ 0.56
XRCC3-206ENST00000554170 CABLES1Q8TDN4 633 aa18.55■□□□□ 0.56
XRCC3-206ENST00000554170 DEFB132Q7Z7B7 95 aa18.54■□□□□ 0.56
XRCC3-206ENST00000554170 C14orf93Q9H972 538 aaKnown RBP18.54■□□□□ 0.56
XRCC3-206ENST00000554170 ARHGEF10O15013 1369 aa18.54■□□□□ 0.56
XRCC3-206ENST00000554170 LRP5O75197 1615 aa18.53■□□□□ 0.56
XRCC3-206ENST00000554170 ONECUT3O60422 494 aaPredicted RBP18.53■□□□□ 0.56
XRCC3-206ENST00000554170 SF3B2Q13435 895 aaKnown RBP18.53■□□□□ 0.56
XRCC3-206ENST00000554170 NEUROD1Q13562 356 aa18.53■□□□□ 0.56
XRCC3-206ENST00000554170 NRAPQ86VF7 1730 aa18.53■□□□□ 0.56
XRCC3-206ENST00000554170 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
XRCC3-206ENST00000554170 TRPM3Q9HCF6 1732 aaPredicted RBP18.52■□□□□ 0.55
XRCC3-206ENST00000554170 DLC1Q96QB1 1528 aa18.51■□□□□ 0.55
XRCC3-206ENST00000554170 ADGRB2O60241 1585 aa18.51■□□□□ 0.55
XRCC3-206ENST00000554170 ANKARQ7Z5J8 1434 aa18.5■□□□□ 0.55
XRCC3-206ENST00000554170 PLEKHG5O94827 1062 aa18.5■□□□□ 0.55
XRCC3-206ENST00000554170 CFAP70Q5T0N1 1121 aa18.5■□□□□ 0.55
XRCC3-206ENST00000554170 LMOD2Q6P5Q4 547 aa18.5■□□□□ 0.55
XRCC3-206ENST00000554170 KRT27Q7Z3Y8 459 aa18.5■□□□□ 0.55
XRCC3-206ENST00000554170 PRAM1Q96QH2 718 aa18.5■□□□□ 0.55
XRCC3-206ENST00000554170 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
XRCC3-206ENST00000554170 SAFB2Q14151 953 aaKnown RBP eCLIP18.49■□□□□ 0.55
XRCC3-206ENST00000554170 ALS2Q96Q42 1657 aa18.49■□□□□ 0.55
XRCC3-206ENST00000554170 FAM83GA6ND36 823 aa18.48■□□□□ 0.55
XRCC3-206ENST00000554170 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
XRCC3-206ENST00000554170 RGPD1P0DJD0 1748 aa18.46■□□□□ 0.55
XRCC3-206ENST00000554170 CRYBG1Q9Y4K1 1723 aa18.46■□□□□ 0.55
XRCC3-206ENST00000554170 PMFBP1Q8TBY8 1022 aa18.45■□□□□ 0.54
XRCC3-206ENST00000554170 POGKQ9P215 609 aa18.45■□□□□ 0.54
XRCC3-206ENST00000554170 ADGRB1O14514 1584 aa18.45■□□□□ 0.54
XRCC3-206ENST00000554170 L3MBTL2Q969R5 705 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms