RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SAFB2Q14151 953 aaKnown RBP eCLIP33.45■■■□□ 2.95
NEK9-203ENST00000553945 POGKQ9P215 609 aa33.45■■■□□ 2.95
NEK9-203ENST00000553945 TONSLQ96HA7 1378 aa33.45■■■□□ 2.94
NEK9-203ENST00000553945 CDC42BPGQ6DT37 1551 aa33.44■■■□□ 2.94
NEK9-203ENST00000553945 NBPF1Q3BBV0 1214 aa33.43■■■□□ 2.94
NEK9-203ENST00000553945 BRINP3Q76B58 766 aa33.42■■■□□ 2.94
NEK9-203ENST00000553945 PHLPP1O60346 1717 aa33.4■■■□□ 2.94
NEK9-203ENST00000553945 C1orf167Q5SNV9 1468 aa33.4■■■□□ 2.94
NEK9-203ENST00000553945 ARHGEF28Q8N1W1 1705 aaKnown RBP33.37■■■□□ 2.93
NEK9-203ENST00000553945 TRPM1Q7Z4N2 1603 aa33.36■■■□□ 2.93
NEK9-203ENST00000553945 AHDC1Q5TGY3 1603 aaPredicted RBP33.33■■■□□ 2.93
NEK9-203ENST00000553945 NUTM2FA1L443 756 aa33.33■■■□□ 2.93
NEK9-203ENST00000553945 FMN2Q9NZ56 1722 aa33.33■■■□□ 2.93
NEK9-203ENST00000553945 NBPF8Q3BBV2 869 aa33.31■■■□□ 2.92
NEK9-203ENST00000553945 ORAI2Q96SN7 254 aa33.31■■■□□ 2.92
NEK9-203ENST00000553945 MINK1Q8N4C8 1332 aaPredicted RBP33.3■■■□□ 2.92
NEK9-203ENST00000553945 COL16A1Q07092 1604 aaPredicted RBP33.3■■■□□ 2.92
NEK9-203ENST00000553945 HIRIP3Q9BW71 556 aaPredicted RBP33.29■■■□□ 2.92
NEK9-203ENST00000553945 CLSPNQ9HAW4 1339 aa33.28■■■□□ 2.92
NEK9-203ENST00000553945 NHSL1Q5SYE7 1610 aa33.28■■■□□ 2.92
NEK9-203ENST00000553945 ADGRB2O60241 1585 aa33.27■■■□□ 2.92
NEK9-203ENST00000553945 ROCK2O75116 1388 aaKnown RBP33.27■■■□□ 2.92
NEK9-203ENST00000553945 ESCO1Q5FWF5 840 aa33.27■■■□□ 2.92
NEK9-203ENST00000553945 CCER1Q8TC90 406 aaPredicted RBP33.27■■■□□ 2.92
NEK9-203ENST00000553945 DDX17Q92841 729 aaKnown RBP33.25■■■□□ 2.91
NEK9-203ENST00000553945 RGPD8O14715 1765 aaPredicted RBP33.21■■■□□ 2.91
NEK9-203ENST00000553945 JCADQ9P266 1359 aa33.19■■■□□ 2.9
NEK9-203ENST00000553945 MED1Q15648 1581 aaPredicted RBP33.17■■■□□ 2.9
NEK9-203ENST00000553945 WASLO00401 505 aaPredicted RBP33.17■■■□□ 2.9
NEK9-203ENST00000553945 CENPJQ9HC77 1338 aaPredicted RBP33.17■■■□□ 2.9
NEK9-203ENST00000553945 RALGAPBQ86X10 1494 aa33.16■■■□□ 2.9
NEK9-203ENST00000553945 EIF3AQ14152 1382 aaKnown RBP33.15■■■□□ 2.9
NEK9-203ENST00000553945 USP32Q8NFA0 1604 aa33.15■■■□□ 2.9
NEK9-203ENST00000553945 QRICH2Q9H0J4 1663 aa33.14■■■□□ 2.9
NEK9-203ENST00000553945 ANKARQ7Z5J8 1434 aa33.14■■■□□ 2.9
NEK9-203ENST00000553945 GPRASP1Q5JY77 1395 aa33.14■■■□□ 2.9
NEK9-203ENST00000553945 DISP3Q9P2K9 1392 aa33.14■■■□□ 2.9
NEK9-203ENST00000553945 KIF1AQ12756 1690 aa33.13■■■□□ 2.89
NEK9-203ENST00000553945 FOXO3O43524 673 aa33.13■■■□□ 2.89
NEK9-203ENST00000553945 TULP4Q9NRJ4 1543 aa33.12■■■□□ 2.89
NEK9-203ENST00000553945 NPHP3Q7Z494 1330 aa33.12■■■□□ 2.89
NEK9-203ENST00000553945 LRRC59Q96AG4 307 aaKnown RBP33.12■■■□□ 2.89
NEK9-203ENST00000553945 CARD11Q9BXL7 1154 aa33.12■■■□□ 2.89
NEK9-203ENST00000553945 SHPRHQ149N8 1683 aa33.11■■■□□ 2.89
NEK9-203ENST00000553945 PHF8Q9UPP1 1060 aa33.11■■■□□ 2.89
NEK9-203ENST00000553945 SOS2Q07890 1332 aaPredicted RBP33.1■■■□□ 2.89
NEK9-203ENST00000553945 TIMELESSQ9UNS1 1208 aa33.1■■■□□ 2.89
NEK9-203ENST00000553945 CDK19Q9BWU1 502 aa33.09■■■□□ 2.89
NEK9-203ENST00000553945 PRR36Q9H6K5 1346 aa33.08■■■□□ 2.89
NEK9-203ENST00000553945 XPCQ01831 940 aaPredicted RBP33.07■■■□□ 2.88
NEK9-203ENST00000553945 PXDNQ92626 1479 aa33.05■■■□□ 2.88
NEK9-203ENST00000553945 PMFBP1Q8TBY8 1022 aa33.04■■■□□ 2.88
NEK9-203ENST00000553945 SPATA31A6Q5VVP1 1343 aa33.03■■■□□ 2.88
NEK9-203ENST00000553945 NUDT16Q96DE0 195 aaKnown RBP33.03■■■□□ 2.88
NEK9-203ENST00000553945 ITSN1Q15811 1721 aa33.02■■■□□ 2.88
NEK9-203ENST00000553945 ATP7BP35670 1465 aa33.01■■■□□ 2.88
NEK9-203ENST00000553945 PNPLA6Q8IY17 1366 aa33■■■□□ 2.87
NEK9-203ENST00000553945 KRT28Q7Z3Y7 464 aa33■■■□□ 2.87
NEK9-203ENST00000553945 SRPK2P78362 688 aaKnown RBP32.99■■■□□ 2.87
NEK9-203ENST00000553945 PHF23Q9BUL5 403 aaPredicted RBP32.99■■■□□ 2.87
NEK9-203ENST00000553945 NUTM2BA6NNL0 878 aaPredicted RBP32.97■■■□□ 2.87
NEK9-203ENST00000553945 NUTM2EB1AL46 878 aaPredicted RBP32.97■■■□□ 2.87
NEK9-203ENST00000553945 PSME1Q06323 249 aa32.97■■■□□ 2.87
NEK9-203ENST00000553945 NUTM2AQ8IVF1 878 aaPredicted RBP32.97■■■□□ 2.87
NEK9-203ENST00000553945 CABP2Q9NPB3 220 aa32.96■■■□□ 2.87
NEK9-203ENST00000553945 LRP6O75581 1613 aa32.95■■■□□ 2.87
NEK9-203ENST00000553945 EVC2Q86UK5 1308 aa32.95■■■□□ 2.86
NEK9-203ENST00000553945 TOPAZ1Q8N9V7 1692 aa32.94■■■□□ 2.86
NEK9-203ENST00000553945 NGDNQ8NEJ9 315 aaKnown RBP32.93■■■□□ 2.86
NEK9-203ENST00000553945 CCDC61Q9Y6R9 512 aa32.93■■■□□ 2.86
NEK9-203ENST00000553945 MEX3CQ5U5Q3 659 aaKnown RBP32.91■■■□□ 2.86
NEK9-203ENST00000553945 SPATA31A3Q5VYP0 1347 aa32.9■■■□□ 2.86
NEK9-203ENST00000553945 COL22A1Q8NFW1 1626 aaPredicted RBP32.89■■■□□ 2.86
NEK9-203ENST00000553945 SBNO2Q9Y2G9 1366 aa32.87■■■□□ 2.85
NEK9-203ENST00000553945 TNS3Q68CZ2 1445 aa32.86■■■□□ 2.85
NEK9-203ENST00000553945 PPIP5K1Q6PFW1 1433 aa32.86■■■□□ 2.85
NEK9-203ENST00000553945 SBNO1A3KN83 1393 aa32.86■■■□□ 2.85
NEK9-203ENST00000553945 PLEKHG3A1L390 1219 aa32.84■■■□□ 2.85
NEK9-203ENST00000553945 LMOD2Q6P5Q4 547 aa32.84■■■□□ 2.85
NEK9-203ENST00000553945 TRPM3Q9HCF6 1732 aaPredicted RBP32.84■■■□□ 2.85
NEK9-203ENST00000553945 ACEP12821 1306 aa32.83■■■□□ 2.85
NEK9-203ENST00000553945 ST20-MTHFSA0A0A6YYL1 179 aa32.83■■■□□ 2.85
NEK9-203ENST00000553945 USP47Q96K76 1375 aa32.82■■■□□ 2.84
NEK9-203ENST00000553945 POLR3AO14802 1390 aaPredicted RBP32.81■■■□□ 2.84
NEK9-203ENST00000553945 ADAMTS2O95450 1211 aa32.8■■■□□ 2.84
NEK9-203ENST00000553945 RGS17Q9UGC6 210 aaPredicted RBP32.8■■■□□ 2.84
NEK9-203ENST00000553945 PAK3O75914 559 aaPredicted RBP32.79■■■□□ 2.84
NEK9-203ENST00000553945 CABP1Q9NZU7 370 aa32.79■■■□□ 2.84
NEK9-203ENST00000553945 ARHGEF10O15013 1369 aa32.78■■■□□ 2.84
NEK9-203ENST00000553945 PLEKHG5O94827 1062 aa32.77■■■□□ 2.84
NEK9-203ENST00000553945 ALS2Q96Q42 1657 aa32.75■■■□□ 2.83
NEK9-203ENST00000553945 ATAD2Q6PL18 1390 aa32.75■■■□□ 2.83
NEK9-203ENST00000553945 ILDR2Q71H61 639 aa32.75■■■□□ 2.83
NEK9-203ENST00000553945 C8orf37Q96NL8 207 aa32.75■■■□□ 2.83
NEK9-203ENST00000553945 TESK2Q96S53 571 aa32.75■■■□□ 2.83
NEK9-203ENST00000553945 HAP1P54257 671 aaPredicted RBP32.71■■■□□ 2.83
NEK9-203ENST00000553945 CABLES1Q8TDN4 633 aa32.71■■■□□ 2.83
NEK9-203ENST00000553945 SLC24A1O60721 1099 aa32.7■■■□□ 2.83
NEK9-203ENST00000553945 AFF2P51816 1311 aa32.69■■■□□ 2.82
NEK9-203ENST00000553945 MARF1Q9Y4F3 1742 aaKnown RBP32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms