RNA–Protein interactions for RNA: ENST00000553898.1

PCNX4-207, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-207ENST00000553898 NALCNQ8IZF0 1738 aa13.98□□□□□ -0.17
PCNX4-207ENST00000553898 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
PCNX4-207ENST00000553898 TRPM1Q7Z4N2 1603 aa13.98□□□□□ -0.17
PCNX4-207ENST00000553898 NBPF1Q3BBV0 1214 aa13.98□□□□□ -0.17
PCNX4-207ENST00000553898 SLAIN2Q9P270 581 aa13.98□□□□□ -0.17
PCNX4-207ENST00000553898 DLC1Q96QB1 1528 aa13.97□□□□□ -0.17
PCNX4-207ENST00000553898 SIRT1Q96EB6 747 aa13.97□□□□□ -0.17
PCNX4-207ENST00000553898 CARD11Q9BXL7 1154 aa13.97□□□□□ -0.17
PCNX4-207ENST00000553898 ROBO1Q9Y6N7 1651 aa13.97□□□□□ -0.17
PCNX4-207ENST00000553898 MINK1Q8N4C8 1332 aaPredicted RBP13.95□□□□□ -0.18
PCNX4-207ENST00000553898 PLEKHH1Q9ULM0 1364 aa13.95□□□□□ -0.18
PCNX4-207ENST00000553898 NBPF8Q3BBV2 869 aa13.94□□□□□ -0.18
PCNX4-207ENST00000553898 ARHGEF28Q8N1W1 1705 aaKnown RBP13.94□□□□□ -0.18
PCNX4-207ENST00000553898 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
PCNX4-207ENST00000553898 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
PCNX4-207ENST00000553898 CENPJQ9HC77 1338 aaPredicted RBP13.93□□□□□ -0.18
PCNX4-207ENST00000553898 CDC42BPGQ6DT37 1551 aa13.93□□□□□ -0.18
PCNX4-207ENST00000553898 NUTM2FA1L443 756 aa13.93□□□□□ -0.18
PCNX4-207ENST00000553898 HSPA1LP34931 641 aa13.93□□□□□ -0.18
PCNX4-207ENST00000553898 MST1RQ04912 1400 aa13.9□□□□□ -0.18
PCNX4-207ENST00000553898 ESCO1Q5FWF5 840 aa13.9□□□□□ -0.18
PCNX4-207ENST00000553898 QRICH2Q9H0J4 1663 aa13.89□□□□□ -0.19
PCNX4-207ENST00000553898 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
PCNX4-207ENST00000553898 C1orf167Q5SNV9 1468 aa13.88□□□□□ -0.19
PCNX4-207ENST00000553898 PHLPP1O60346 1717 aa13.88□□□□□ -0.19
PCNX4-207ENST00000553898 SRPK2P78362 688 aaKnown RBP13.88□□□□□ -0.19
PCNX4-207ENST00000553898 FMN2Q9NZ56 1722 aa13.87□□□□□ -0.19
PCNX4-207ENST00000553898 GPRASP1Q5JY77 1395 aa13.87□□□□□ -0.19
PCNX4-207ENST00000553898 WASLO00401 505 aaPredicted RBP13.87□□□□□ -0.19
PCNX4-207ENST00000553898 BRINP3Q76B58 766 aa13.87□□□□□ -0.19
PCNX4-207ENST00000553898 ADGRB2O60241 1585 aa13.87□□□□□ -0.19
PCNX4-207ENST00000553898 EVC2Q86UK5 1308 aa13.87□□□□□ -0.19
PCNX4-207ENST00000553898 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
PCNX4-207ENST00000553898 ORAI2Q96SN7 254 aa13.85□□□□□ -0.19
PCNX4-207ENST00000553898 CDK19Q9BWU1 502 aa13.85□□□□□ -0.19
PCNX4-207ENST00000553898 AHDC1Q5TGY3 1603 aaPredicted RBP13.85□□□□□ -0.19
PCNX4-207ENST00000553898 ANKARQ7Z5J8 1434 aa13.84□□□□□ -0.19
PCNX4-207ENST00000553898 NHSL1Q5SYE7 1610 aa13.84□□□□□ -0.19
PCNX4-207ENST00000553898 SLC24A1O60721 1099 aa13.84□□□□□ -0.19
PCNX4-207ENST00000553898 NPHP3Q7Z494 1330 aa13.84□□□□□ -0.19
PCNX4-207ENST00000553898 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
PCNX4-207ENST00000553898 KIF1AQ12756 1690 aa13.83□□□□□ -0.2
PCNX4-207ENST00000553898 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.2
PCNX4-207ENST00000553898 ITSN1Q15811 1721 aa13.83□□□□□ -0.2
PCNX4-207ENST00000553898 USP47Q96K76 1375 aa13.83□□□□□ -0.2
PCNX4-207ENST00000553898 PSME1Q06323 249 aa13.82□□□□□ -0.2
PCNX4-207ENST00000553898 NGDNQ8NEJ9 315 aaKnown RBP13.82□□□□□ -0.2
PCNX4-207ENST00000553898 FOXO3O43524 673 aa13.81□□□□□ -0.2
PCNX4-207ENST00000553898 PMFBP1Q8TBY8 1022 aa13.81□□□□□ -0.2
PCNX4-207ENST00000553898 NUDT16Q96DE0 195 aaKnown RBP13.81□□□□□ -0.2
PCNX4-207ENST00000553898 DISP3Q9P2K9 1392 aa13.81□□□□□ -0.2
PCNX4-207ENST00000553898 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
PCNX4-207ENST00000553898 ST20-MTHFSA0A0A6YYL1 179 aa13.8□□□□□ -0.2
PCNX4-207ENST00000553898 DDX17Q92841 729 aaKnown RBP13.8□□□□□ -0.2
PCNX4-207ENST00000553898 LRRC59Q96AG4 307 aaKnown RBP13.8□□□□□ -0.2
PCNX4-207ENST00000553898 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
PCNX4-207ENST00000553898 EIF4G2P78344 907 aaKnown RBP eCLIP13.79□□□□□ -0.2
PCNX4-207ENST00000553898 XPCQ01831 940 aaPredicted RBP13.79□□□□□ -0.2
PCNX4-207ENST00000553898 LMOD2Q6P5Q4 547 aa13.79□□□□□ -0.2
PCNX4-207ENST00000553898 SHPRHQ149N8 1683 aa13.79□□□□□ -0.2
PCNX4-207ENST00000553898 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
PCNX4-207ENST00000553898 JCADQ9P266 1359 aa13.78□□□□□ -0.2
PCNX4-207ENST00000553898 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
PCNX4-207ENST00000553898 TMF1P82094 1093 aa13.77□□□□□ -0.21
PCNX4-207ENST00000553898 CDCA8Q53HL2 280 aa13.77□□□□□ -0.21
PCNX4-207ENST00000553898 ATAD2Q6PL18 1390 aa13.77□□□□□ -0.21
PCNX4-207ENST00000553898 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
PCNX4-207ENST00000553898 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.21
PCNX4-207ENST00000553898 USP32Q8NFA0 1604 aa13.76□□□□□ -0.21
PCNX4-207ENST00000553898 ATP7BP35670 1465 aa13.76□□□□□ -0.21
PCNX4-207ENST00000553898 PPIP5K1Q6PFW1 1433 aa13.76□□□□□ -0.21
PCNX4-207ENST00000553898 PRR36Q9H6K5 1346 aa13.76□□□□□ -0.21
PCNX4-207ENST00000553898 ADRA2BP18089 450 aa13.76□□□□□ -0.21
PCNX4-207ENST00000553898 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
PCNX4-207ENST00000553898 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
PCNX4-207ENST00000553898 TMC1Q8TDI8 760 aa13.76□□□□□ -0.21
PCNX4-207ENST00000553898 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
PCNX4-207ENST00000553898 NUTM2BA6NNL0 878 aaPredicted RBP13.74□□□□□ -0.21
PCNX4-207ENST00000553898 NUTM2EB1AL46 878 aaPredicted RBP13.74□□□□□ -0.21
PCNX4-207ENST00000553898 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
PCNX4-207ENST00000553898 NUTM2AQ8IVF1 878 aaPredicted RBP13.74□□□□□ -0.21
PCNX4-207ENST00000553898 SOS2Q07890 1332 aaPredicted RBP13.73□□□□□ -0.21
PCNX4-207ENST00000553898 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
PCNX4-207ENST00000553898 ACEP12821 1306 aa13.72□□□□□ -0.21
PCNX4-207ENST00000553898 SPATA31A6Q5VVP1 1343 aa13.72□□□□□ -0.21
PCNX4-207ENST00000553898 HSPA5P11021 654 aaKnown RBP13.72□□□□□ -0.21
PCNX4-207ENST00000553898 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
PCNX4-207ENST00000553898 CABP1Q9NZU7 370 aa13.72□□□□□ -0.21
PCNX4-207ENST00000553898 LRP6O75581 1613 aa13.72□□□□□ -0.21
PCNX4-207ENST00000553898 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.21
PCNX4-207ENST00000553898 PXDNQ92626 1479 aa13.71□□□□□ -0.21
PCNX4-207ENST00000553898 ARHGEF10O15013 1369 aa13.71□□□□□ -0.22
PCNX4-207ENST00000553898 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
PCNX4-207ENST00000553898 ILDR2Q71H61 639 aa13.7□□□□□ -0.22
PCNX4-207ENST00000553898 TESK2Q96S53 571 aa13.7□□□□□ -0.22
PCNX4-207ENST00000553898 TERF2IPQ9NYB0 399 aa13.7□□□□□ -0.22
PCNX4-207ENST00000553898 TNS3Q68CZ2 1445 aa13.7□□□□□ -0.22
PCNX4-207ENST00000553898 SBNO1A3KN83 1393 aa13.7□□□□□ -0.22
PCNX4-207ENST00000553898 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
PCNX4-207ENST00000553898 PNPLA6Q8IY17 1366 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms