RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 PLEKHH1Q9ULM0 1364 aa29.53■■■□□ 2.32
PRAF2-202ENST00000553851 LRRC59Q96AG4 307 aaKnown RBP29.5■■■□□ 2.31
PRAF2-202ENST00000553851 SIRT1Q96EB6 747 aa29.5■■■□□ 2.31
PRAF2-202ENST00000553851 KNDC1Q76NI1 1749 aa29.5■■■□□ 2.31
PRAF2-202ENST00000553851 NHSL1Q5SYE7 1610 aa29.49■■■□□ 2.31
PRAF2-202ENST00000553851 STAC3Q96MF2 364 aa29.48■■■□□ 2.31
PRAF2-202ENST00000553851 LAMC1P11047 1609 aa29.48■■■□□ 2.31
PRAF2-202ENST00000553851 CDC42BPGQ6DT37 1551 aa29.46■■■□□ 2.31
PRAF2-202ENST00000553851 SHPRHQ149N8 1683 aa29.46■■■□□ 2.31
PRAF2-202ENST00000553851 ESCO1Q5FWF5 840 aa29.45■■■□□ 2.31
PRAF2-202ENST00000553851 MEX3CQ5U5Q3 659 aaKnown RBP29.45■■■□□ 2.31
PRAF2-202ENST00000553851 NUTM2FA1L443 756 aa29.45■■■□□ 2.3
PRAF2-202ENST00000553851 LRP6O75581 1613 aa29.44■■■□□ 2.3
PRAF2-202ENST00000553851 NUTM2BA6NNL0 878 aaPredicted RBP29.44■■■□□ 2.3
PRAF2-202ENST00000553851 NUTM2EB1AL46 878 aaPredicted RBP29.44■■■□□ 2.3
PRAF2-202ENST00000553851 POTEAQ6S8J7 498 aa29.44■■■□□ 2.3
PRAF2-202ENST00000553851 NUTM2AQ8IVF1 878 aaPredicted RBP29.44■■■□□ 2.3
PRAF2-202ENST00000553851 PRAM1Q96QH2 718 aa29.42■■■□□ 2.3
PRAF2-202ENST00000553851 SAFB2Q14151 953 aaKnown RBP eCLIP29.41■■■□□ 2.3
PRAF2-202ENST00000553851 SOS2Q07890 1332 aaPredicted RBP29.4■■■□□ 2.3
PRAF2-202ENST00000553851 POGKQ9P215 609 aa29.39■■■□□ 2.3
PRAF2-202ENST00000553851 TRAK1Q9UPV9 953 aa29.38■■■□□ 2.29
PRAF2-202ENST00000553851 ADGRB1O14514 1584 aa29.38■■■□□ 2.29
PRAF2-202ENST00000553851 PNPLA6Q8IY17 1366 aa29.37■■■□□ 2.29
PRAF2-202ENST00000553851 FOXO3O43524 673 aa29.35■■■□□ 2.29
PRAF2-202ENST00000553851 NPHP3Q7Z494 1330 aa29.34■■■□□ 2.29
PRAF2-202ENST00000553851 DLC1Q96QB1 1528 aa29.34■■■□□ 2.29
PRAF2-202ENST00000553851 FMN2Q9NZ56 1722 aa29.31■■■□□ 2.28
PRAF2-202ENST00000553851 XPCQ01831 940 aaPredicted RBP29.3■■■□□ 2.28
PRAF2-202ENST00000553851 ZNF772Q68DY9 489 aaPredicted RBP29.3■■■□□ 2.28
PRAF2-202ENST00000553851 PXDNQ92626 1479 aa29.25■■■□□ 2.27
PRAF2-202ENST00000553851 HIRIP3Q9BW71 556 aaPredicted RBP29.25■■■□□ 2.27
PRAF2-202ENST00000553851 MINK1Q8N4C8 1332 aaPredicted RBP29.25■■■□□ 2.27
PRAF2-202ENST00000553851 C8orf37Q96NL8 207 aa29.24■■■□□ 2.27
PRAF2-202ENST00000553851 PHF8Q9UPP1 1060 aa29.24■■■□□ 2.27
PRAF2-202ENST00000553851 ADAMTS2O95450 1211 aa29.23■■■□□ 2.27
PRAF2-202ENST00000553851 SIN3AQ96ST3 1273 aa29.23■■■□□ 2.27
PRAF2-202ENST00000553851 AFF2P51816 1311 aa29.23■■■□□ 2.27
PRAF2-202ENST00000553851 KRT28Q7Z3Y7 464 aa29.2■■■□□ 2.27
PRAF2-202ENST00000553851 RGPD8O14715 1765 aaPredicted RBP29.2■■■□□ 2.26
PRAF2-202ENST00000553851 L3MBTL2Q969R5 705 aa29.2■■■□□ 2.26
PRAF2-202ENST00000553851 KIF1AQ12756 1690 aa29.19■■■□□ 2.26
PRAF2-202ENST00000553851 NEUROD1Q13562 356 aa29.19■■■□□ 2.26
PRAF2-202ENST00000553851 NBPF1Q3BBV0 1214 aa29.19■■■□□ 2.26
PRAF2-202ENST00000553851 ADGRB2O60241 1585 aa29.18■■■□□ 2.26
PRAF2-202ENST00000553851 WASLO00401 505 aaPredicted RBP29.18■■■□□ 2.26
PRAF2-202ENST00000553851 NGLY1Q96IV0 654 aa29.18■■■□□ 2.26
PRAF2-202ENST00000553851 ANKARQ7Z5J8 1434 aa29.17■■■□□ 2.26
PRAF2-202ENST00000553851 PMFBP1Q8TBY8 1022 aa29.16■■■□□ 2.26
PRAF2-202ENST00000553851 SPATA31A3Q5VYP0 1347 aa29.15■■■□□ 2.26
PRAF2-202ENST00000553851 PSME1Q06323 249 aa29.15■■■□□ 2.26
PRAF2-202ENST00000553851 TRIM26Q12899 539 aaPredicted RBP29.15■■■□□ 2.26
PRAF2-202ENST00000553851 KIAA1210Q9ULL0 1709 aa29.15■■■□□ 2.26
PRAF2-202ENST00000553851 COL22A1Q8NFW1 1626 aaPredicted RBP29.14■■■□□ 2.26
PRAF2-202ENST00000553851 RXRBP28702 533 aa29.14■■■□□ 2.25
PRAF2-202ENST00000553851 EIF3AQ14152 1382 aaKnown RBP29.13■■■□□ 2.25
PRAF2-202ENST00000553851 ARHGEF28Q8N1W1 1705 aaKnown RBP29.13■■■□□ 2.25
PRAF2-202ENST00000553851 PRR36Q9H6K5 1346 aa29.12■■■□□ 2.25
PRAF2-202ENST00000553851 USP32Q8NFA0 1604 aa29.12■■■□□ 2.25
PRAF2-202ENST00000553851 QTRT2Q9H974 415 aaKnown RBP29.11■■■□□ 2.25
PRAF2-202ENST00000553851 TULP4Q9NRJ4 1543 aa29.08■■■□□ 2.25
PRAF2-202ENST00000553851 USP21Q9UK80 565 aa29.07■■■□□ 2.24
PRAF2-202ENST00000553851 SBNO1A3KN83 1393 aa29.06■■■□□ 2.24
PRAF2-202ENST00000553851 FNBP4Q8N3X1 1017 aaPredicted RBP29.06■■■□□ 2.24
PRAF2-202ENST00000553851 LMOD2Q6P5Q4 547 aa29.05■■■□□ 2.24
PRAF2-202ENST00000553851 NUDT16Q96DE0 195 aaKnown RBP29.05■■■□□ 2.24
PRAF2-202ENST00000553851 CDK19Q9BWU1 502 aa29.05■■■□□ 2.24
PRAF2-202ENST00000553851 TNS3Q68CZ2 1445 aa29.05■■■□□ 2.24
PRAF2-202ENST00000553851 RBM6P78332 1123 aaKnown RBP29.03■■■□□ 2.24
PRAF2-202ENST00000553851 NGDNQ8NEJ9 315 aaKnown RBP29.02■■■□□ 2.24
PRAF2-202ENST00000553851 GPRASP1Q5JY77 1395 aa29.02■■■□□ 2.24
PRAF2-202ENST00000553851 PLEKHG5O94827 1062 aa29.01■■■□□ 2.23
PRAF2-202ENST00000553851 CABLES1Q8TDN4 633 aa29■■■□□ 2.23
PRAF2-202ENST00000553851 HAP1P54257 671 aaPredicted RBP28.99■■■□□ 2.23
PRAF2-202ENST00000553851 TRPC5Q9UL62 973 aaPredicted RBP28.99■■■□□ 2.23
PRAF2-202ENST00000553851 CENPJQ9HC77 1338 aaPredicted RBP28.99■■■□□ 2.23
PRAF2-202ENST00000553851 ARHGEF10O15013 1369 aa28.99■■■□□ 2.23
PRAF2-202ENST00000553851 CDK12Q9NYV4 1490 aaPredicted RBP28.98■■■□□ 2.23
PRAF2-202ENST00000553851 ATP7BP35670 1465 aa28.97■■■□□ 2.23
PRAF2-202ENST00000553851 MARF1Q9Y4F3 1742 aaKnown RBP28.95■■■□□ 2.22
PRAF2-202ENST00000553851 CCDC61Q9Y6R9 512 aa28.94■■■□□ 2.22
PRAF2-202ENST00000553851 BCL9LQ86UU0 1499 aa28.93■■■□□ 2.22
PRAF2-202ENST00000553851 ROCK2O75116 1388 aaKnown RBP28.93■■■□□ 2.22
PRAF2-202ENST00000553851 PAK3O75914 559 aaPredicted RBP28.93■■■□□ 2.22
PRAF2-202ENST00000553851 NBPF8Q3BBV2 869 aa28.93■■■□□ 2.22
PRAF2-202ENST00000553851 TRPM1Q7Z4N2 1603 aa28.92■■■□□ 2.22
PRAF2-202ENST00000553851 ATRNO75882 1429 aa28.92■■■□□ 2.22
PRAF2-202ENST00000553851 SRPK2P78362 688 aaKnown RBP28.92■■■□□ 2.22
PRAF2-202ENST00000553851 TRPM3Q9HCF6 1732 aaPredicted RBP28.91■■■□□ 2.22
PRAF2-202ENST00000553851 RGS12O14924 1447 aa28.9■■■□□ 2.22
PRAF2-202ENST00000553851 ITSN1Q15811 1721 aa28.9■■■□□ 2.22
PRAF2-202ENST00000553851 PLEKHG3A1L390 1219 aa28.89■■■□□ 2.21
PRAF2-202ENST00000553851 UNC5CLQ8IV45 518 aa28.89■■■□□ 2.21
PRAF2-202ENST00000553851 CABP2Q9NPB3 220 aa28.89■■■□□ 2.21
PRAF2-202ENST00000553851 ACEP12821 1306 aa28.88■■■□□ 2.21
PRAF2-202ENST00000553851 TONSLQ96HA7 1378 aa28.87■■■□□ 2.21
PRAF2-202ENST00000553851 SLIT2O94813 1529 aa28.87■■■□□ 2.21
PRAF2-202ENST00000553851 POLR3AO14802 1390 aaPredicted RBP28.86■■■□□ 2.21
PRAF2-202ENST00000553851 ALS2Q96Q42 1657 aa28.85■■■□□ 2.21
PRAF2-202ENST00000553851 QRICH2Q9H0J4 1663 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms