RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
PRKCH-206ENST00000553830 KIF7Q2M1P5 1343 aa19.66■□□□□ 0.74
PRKCH-206ENST00000553830 WASHC2AQ641Q2 1341 aa19.66■□□□□ 0.74
PRKCH-206ENST00000553830 ZNF335Q9H4Z2 1342 aaPredicted RBP19.66■□□□□ 0.74
PRKCH-206ENST00000553830 CCDC7Q96M83 1385 aa19.66■□□□□ 0.74
PRKCH-206ENST00000553830 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
PRKCH-206ENST00000553830 NALCNQ8IZF0 1738 aa19.65■□□□□ 0.74
PRKCH-206ENST00000553830 C14orf37Q86TY3 774 aa19.65■□□□□ 0.74
PRKCH-206ENST00000553830 PROSER2Q86WR7 435 aaPredicted RBP19.65■□□□□ 0.74
PRKCH-206ENST00000553830 SIRT1Q96EB6 747 aa19.65■□□□□ 0.74
PRKCH-206ENST00000553830 NKTRP30414 1462 aaKnown RBP19.64■□□□□ 0.73
PRKCH-206ENST00000553830 SBNO2Q9Y2G9 1366 aa19.63■□□□□ 0.73
PRKCH-206ENST00000553830 EVC2Q86UK5 1308 aa19.63■□□□□ 0.73
PRKCH-206ENST00000553830 SRPK2P78362 688 aaKnown RBP19.61■□□□□ 0.73
PRKCH-206ENST00000553830 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
PRKCH-206ENST00000553830 XIRP1Q702N8 1843 aaKnown RBP19.6■□□□□ 0.73
PRKCH-206ENST00000553830 DDX10Q13206 875 aaKnown RBP19.6■□□□□ 0.73
PRKCH-206ENST00000553830 ADGRB2O60241 1585 aa19.6■□□□□ 0.73
PRKCH-206ENST00000553830 CDK19Q9BWU1 502 aa19.59■□□□□ 0.73
PRKCH-206ENST00000553830 NUTM2FA1L443 756 aa19.58■□□□□ 0.72
PRKCH-206ENST00000553830 CDCA8Q53HL2 280 aa19.58■□□□□ 0.72
PRKCH-206ENST00000553830 MYOM1P52179 1685 aa19.58■□□□□ 0.72
PRKCH-206ENST00000553830 RGPD8O14715 1765 aaPredicted RBP19.57■□□□□ 0.72
PRKCH-206ENST00000553830 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
PRKCH-206ENST00000553830 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
PRKCH-206ENST00000553830 WASLO00401 505 aaPredicted RBP19.56■□□□□ 0.72
PRKCH-206ENST00000553830 ADGRL3Q9HAR2 1447 aa19.56■□□□□ 0.72
PRKCH-206ENST00000553830 TMC1Q8TDI8 760 aa19.55■□□□□ 0.72
PRKCH-206ENST00000553830 FMN2Q9NZ56 1722 aa19.55■□□□□ 0.72
PRKCH-206ENST00000553830 LRRC7Q96NW7 1537 aa19.54■□□□□ 0.72
PRKCH-206ENST00000553830 CDC42BPGQ6DT37 1551 aa19.53■□□□□ 0.72
PRKCH-206ENST00000553830 ITSN1Q15811 1721 aa19.51■□□□□ 0.71
PRKCH-206ENST00000553830 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
PRKCH-206ENST00000553830 ATAD2Q6PL18 1390 aa19.49■□□□□ 0.71
PRKCH-206ENST00000553830 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
PRKCH-206ENST00000553830 TOPAZ1Q8N9V7 1692 aa19.49■□□□□ 0.71
PRKCH-206ENST00000553830 PRR36Q9H6K5 1346 aa19.49■□□□□ 0.71
PRKCH-206ENST00000553830 ATP7BP35670 1465 aa19.48■□□□□ 0.71
PRKCH-206ENST00000553830 LTBP4Q8N2S1 1624 aa19.48■□□□□ 0.71
PRKCH-206ENST00000553830 MSH6P52701 1360 aa19.47■□□□□ 0.71
PRKCH-206ENST00000553830 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
PRKCH-206ENST00000553830 SLC12A5Q9H2X9 1139 aa19.47■□□□□ 0.71
PRKCH-206ENST00000553830 PPIP5K1Q6PFW1 1433 aa19.46■□□□□ 0.71
PRKCH-206ENST00000553830 ATF3P18847 181 aa19.46■□□□□ 0.71
PRKCH-206ENST00000553830 CNGB1Q14028 1251 aaPredicted RBP19.46■□□□□ 0.71
PRKCH-206ENST00000553830 C19orf44Q9H6X5 657 aa19.46■□□□□ 0.71
PRKCH-206ENST00000553830 PANK3Q9H999 370 aa19.46■□□□□ 0.71
PRKCH-206ENST00000553830 PUS7Q96PZ0 661 aaKnown RBP19.45■□□□□ 0.7
PRKCH-206ENST00000553830 CABP1Q9NZU7 370 aa19.45■□□□□ 0.7
PRKCH-206ENST00000553830 NCOA3Q9Y6Q9 1424 aa19.44■□□□□ 0.7
PRKCH-206ENST00000553830 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
PRKCH-206ENST00000553830 PMFBP1Q8TBY8 1022 aa19.42■□□□□ 0.7
PRKCH-206ENST00000553830 CCDC61Q9Y6R9 512 aa19.42■□□□□ 0.7
PRKCH-206ENST00000553830 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
PRKCH-206ENST00000553830 NINLQ9Y2I6 1382 aa19.4■□□□□ 0.7
PRKCH-206ENST00000553830 DCCP43146 1447 aa19.4■□□□□ 0.7
PRKCH-206ENST00000553830 ESCO1Q5FWF5 840 aa19.39■□□□□ 0.69
PRKCH-206ENST00000553830 HDGFL2Q7Z4V5 671 aaPredicted RBP19.39■□□□□ 0.69
PRKCH-206ENST00000553830 CADPS2Q86UW7 1296 aa19.39■□□□□ 0.69
PRKCH-206ENST00000553830 A0A1W2PP64 1363 aa19.39■□□□□ 0.69
PRKCH-206ENST00000553830 MST1RQ04912 1400 aa19.38■□□□□ 0.69
PRKCH-206ENST00000553830 ANKRD36BQ8N2N9 1353 aa19.38■□□□□ 0.69
PRKCH-206ENST00000553830 TERF2IPQ9NYB0 399 aa19.38■□□□□ 0.69
PRKCH-206ENST00000553830 MON2Q7Z3U7 1717 aa19.37■□□□□ 0.69
PRKCH-206ENST00000553830 C1orf167Q5SNV9 1468 aa19.37■□□□□ 0.69
PRKCH-206ENST00000553830 CD163L1Q9NR16 1453 aa19.37■□□□□ 0.69
PRKCH-206ENST00000553830 NSD3Q9BZ95 1437 aa19.37■□□□□ 0.69
PRKCH-206ENST00000553830 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
PRKCH-206ENST00000553830 ORAI2Q96SN7 254 aa19.36■□□□□ 0.69
PRKCH-206ENST00000553830 ACEP12821 1306 aa19.35■□□□□ 0.69
PRKCH-206ENST00000553830 CARD14Q9BXL6 1004 aa19.35■□□□□ 0.69
PRKCH-206ENST00000553830 PHF8Q9UPP1 1060 aa19.35■□□□□ 0.69
PRKCH-206ENST00000553830 KNSTRNQ9Y448 316 aa19.35■□□□□ 0.69
PRKCH-206ENST00000553830 KIF20BQ96Q89 1820 aa19.35■□□□□ 0.69
PRKCH-206ENST00000553830 KTN1Q86UP2 1357 aaKnown RBP19.34■□□□□ 0.69
PRKCH-206ENST00000553830 KIF1AQ12756 1690 aa19.34■□□□□ 0.69
PRKCH-206ENST00000553830 PLEKHG3A1L390 1219 aa19.33■□□□□ 0.68
PRKCH-206ENST00000553830 CC2D1BQ5T0F9 858 aaKnown RBP19.32■□□□□ 0.68
PRKCH-206ENST00000553830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.68
PRKCH-206ENST00000553830 CPSF1Q10570 1443 aaKnown RBP19.31■□□□□ 0.68
PRKCH-206ENST00000553830 PER1O15534 1290 aaPredicted RBP19.3■□□□□ 0.68
PRKCH-206ENST00000553830 ANP32CO43423 234 aa19.3■□□□□ 0.68
PRKCH-206ENST00000553830 XPCQ01831 940 aaPredicted RBP19.3■□□□□ 0.68
PRKCH-206ENST00000553830 SLAIN2Q9P270 581 aa19.3■□□□□ 0.68
PRKCH-206ENST00000553830 NRKQ7Z2Y5 1582 aa19.29■□□□□ 0.68
PRKCH-206ENST00000553830 POLR3AO14802 1390 aaPredicted RBP19.29■□□□□ 0.68
PRKCH-206ENST00000553830 USP6P35125 1406 aa19.28■□□□□ 0.68
PRKCH-206ENST00000553830 FOXO3O43524 673 aa19.28■□□□□ 0.68
PRKCH-206ENST00000553830 DDX17Q92841 729 aaKnown RBP19.28■□□□□ 0.68
PRKCH-206ENST00000553830 EDC4Q6P2E9 1401 aaKnown RBP19.27■□□□□ 0.68
PRKCH-206ENST00000553830 PSME1Q06323 249 aa19.27■□□□□ 0.68
PRKCH-206ENST00000553830 CGNL1Q0VF96 1302 aa19.26■□□□□ 0.67
PRKCH-206ENST00000553830 PAK3O75914 559 aaPredicted RBP19.26■□□□□ 0.67
PRKCH-206ENST00000553830 MIER1Q8N108 512 aa19.26■□□□□ 0.67
PRKCH-206ENST00000553830 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
PRKCH-206ENST00000553830 ROBO1Q9Y6N7 1651 aa19.26■□□□□ 0.67
PRKCH-206ENST00000553830 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
PRKCH-206ENST00000553830 ANKRD26Q9UPS8 1709 aa19.25■□□□□ 0.67
PRKCH-206ENST00000553830 AMER1Q5JTC6 1135 aaPredicted RBP19.25■□□□□ 0.67
PRKCH-206ENST00000553830 BRINP3Q76B58 766 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms