RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 JCADQ9P266 1359 aa14.78□□□□□ -0.04
HNRNPC-208ENST00000553753 COL16A1Q07092 1604 aaPredicted RBP14.78□□□□□ -0.04
HNRNPC-208ENST00000553753 PRAM1Q96QH2 718 aa14.78□□□□□ -0.04
HNRNPC-208ENST00000553753 ORAI2Q96SN7 254 aa14.78□□□□□ -0.04
HNRNPC-208ENST00000553753 TRAK1Q9UPV9 953 aa14.78□□□□□ -0.04
HNRNPC-208ENST00000553753 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.05
HNRNPC-208ENST00000553753 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
HNRNPC-208ENST00000553753 SAFB2Q14151 953 aaKnown RBP eCLIP14.76□□□□□ -0.05
HNRNPC-208ENST00000553753 POGKQ9P215 609 aa14.76□□□□□ -0.05
HNRNPC-208ENST00000553753 DDX17Q92841 729 aaKnown RBP14.75□□□□□ -0.05
HNRNPC-208ENST00000553753 L3MBTL2Q969R5 705 aa14.75□□□□□ -0.05
HNRNPC-208ENST00000553753 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
HNRNPC-208ENST00000553753 DLC1Q96QB1 1528 aa14.75□□□□□ -0.05
HNRNPC-208ENST00000553753 NUTM2FA1L443 756 aa14.75□□□□□ -0.05
HNRNPC-208ENST00000553753 ESCO1Q5FWF5 840 aa14.75□□□□□ -0.05
HNRNPC-208ENST00000553753 ILDR2Q71H61 639 aa14.75□□□□□ -0.05
HNRNPC-208ENST00000553753 LRRC59Q96AG4 307 aaKnown RBP14.74□□□□□ -0.05
HNRNPC-208ENST00000553753 NHSL1Q5SYE7 1610 aa14.74□□□□□ -0.05
HNRNPC-208ENST00000553753 SPATA31A6Q5VVP1 1343 aa14.72□□□□□ -0.05
HNRNPC-208ENST00000553753 NBPF1Q3BBV0 1214 aa14.7□□□□□ -0.06
HNRNPC-208ENST00000553753 SOS2Q07890 1332 aaPredicted RBP14.7□□□□□ -0.06
HNRNPC-208ENST00000553753 KIAA1210Q9ULL0 1709 aa14.7□□□□□ -0.06
HNRNPC-208ENST00000553753 FOXO3O43524 673 aa14.7□□□□□ -0.06
HNRNPC-208ENST00000553753 FMN2Q9NZ56 1722 aa14.7□□□□□ -0.06
HNRNPC-208ENST00000553753 NPHP3Q7Z494 1330 aa14.7□□□□□ -0.06
HNRNPC-208ENST00000553753 SHPRHQ149N8 1683 aa14.69□□□□□ -0.06
HNRNPC-208ENST00000553753 HIRIP3Q9BW71 556 aaPredicted RBP14.69□□□□□ -0.06
HNRNPC-208ENST00000553753 MINK1Q8N4C8 1332 aaPredicted RBP14.69□□□□□ -0.06
HNRNPC-208ENST00000553753 RGS17Q9UGC6 210 aaPredicted RBP14.68□□□□□ -0.06
HNRNPC-208ENST00000553753 NUTM2BA6NNL0 878 aaPredicted RBP14.66□□□□□ -0.06
HNRNPC-208ENST00000553753 NUTM2EB1AL46 878 aaPredicted RBP14.66□□□□□ -0.06
HNRNPC-208ENST00000553753 NUTM2AQ8IVF1 878 aaPredicted RBP14.66□□□□□ -0.06
HNRNPC-208ENST00000553753 PNPLA6Q8IY17 1366 aa14.66□□□□□ -0.06
HNRNPC-208ENST00000553753 ADGRB2O60241 1585 aa14.66□□□□□ -0.06
HNRNPC-208ENST00000553753 ARHGEF28Q8N1W1 1705 aaKnown RBP14.66□□□□□ -0.06
HNRNPC-208ENST00000553753 WASLO00401 505 aaPredicted RBP14.65□□□□□ -0.06
HNRNPC-208ENST00000553753 LRP6O75581 1613 aa14.65□□□□□ -0.06
HNRNPC-208ENST00000553753 MEX3CQ5U5Q3 659 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-208ENST00000553753 XPCQ01831 940 aaPredicted RBP14.65□□□□□ -0.06
HNRNPC-208ENST00000553753 PHF8Q9UPP1 1060 aa14.65□□□□□ -0.06
HNRNPC-208ENST00000553753 RGPD8O14715 1765 aaPredicted RBP14.64□□□□□ -0.07
HNRNPC-208ENST00000553753 ANKARQ7Z5J8 1434 aa14.64□□□□□ -0.07
HNRNPC-208ENST00000553753 PXDNQ92626 1479 aa14.63□□□□□ -0.07
HNRNPC-208ENST00000553753 EIF3AQ14152 1382 aaKnown RBP14.63□□□□□ -0.07
HNRNPC-208ENST00000553753 PCGF6Q9BYE7 350 aa14.63□□□□□ -0.07
HNRNPC-208ENST00000553753 TONSLQ96HA7 1378 aa14.63□□□□□ -0.07
HNRNPC-208ENST00000553753 KIF1AQ12756 1690 aa14.63□□□□□ -0.07
HNRNPC-208ENST00000553753 KRT28Q7Z3Y7 464 aa14.62□□□□□ -0.07
HNRNPC-208ENST00000553753 PMFBP1Q8TBY8 1022 aa14.62□□□□□ -0.07
HNRNPC-208ENST00000553753 USP32Q8NFA0 1604 aa14.61□□□□□ -0.07
HNRNPC-208ENST00000553753 ROCK2O75116 1388 aaKnown RBP14.61□□□□□ -0.07
HNRNPC-208ENST00000553753 TULP4Q9NRJ4 1543 aa14.61□□□□□ -0.07
HNRNPC-208ENST00000553753 PRR36Q9H6K5 1346 aa14.61□□□□□ -0.07
HNRNPC-208ENST00000553753 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
HNRNPC-208ENST00000553753 SOCS7O14512 581 aa14.6□□□□□ -0.07
HNRNPC-208ENST00000553753 PSME1Q06323 249 aa14.6□□□□□ -0.07
HNRNPC-208ENST00000553753 NBPF8Q3BBV2 869 aa14.6□□□□□ -0.07
HNRNPC-208ENST00000553753 POTEAQ6S8J7 498 aa14.6□□□□□ -0.07
HNRNPC-208ENST00000553753 TRPM1Q7Z4N2 1603 aa14.6□□□□□ -0.07
HNRNPC-208ENST00000553753 CDK19Q9BWU1 502 aa14.6□□□□□ -0.07
HNRNPC-208ENST00000553753 SPATA31A3Q5VYP0 1347 aa14.59□□□□□ -0.07
HNRNPC-208ENST00000553753 ADAMTS2O95450 1211 aa14.58□□□□□ -0.08
HNRNPC-208ENST00000553753 ZNF772Q68DY9 489 aaPredicted RBP14.58□□□□□ -0.08
HNRNPC-208ENST00000553753 NUDT16Q96DE0 195 aaKnown RBP14.58□□□□□ -0.08
HNRNPC-208ENST00000553753 C8orf37Q96NL8 207 aa14.57□□□□□ -0.08
HNRNPC-208ENST00000553753 COL22A1Q8NFW1 1626 aaPredicted RBP14.56□□□□□ -0.08
HNRNPC-208ENST00000553753 ATP7BP35670 1465 aa14.56□□□□□ -0.08
HNRNPC-208ENST00000553753 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
HNRNPC-208ENST00000553753 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
HNRNPC-208ENST00000553753 SBNO1A3KN83 1393 aa14.55□□□□□ -0.08
HNRNPC-208ENST00000553753 GPRASP1Q5JY77 1395 aa14.55□□□□□ -0.08
HNRNPC-208ENST00000553753 NGLY1Q96IV0 654 aa14.55□□□□□ -0.08
HNRNPC-208ENST00000553753 AFF2P51816 1311 aa14.55□□□□□ -0.08
HNRNPC-208ENST00000553753 SRPK2P78362 688 aaKnown RBP14.55□□□□□ -0.08
HNRNPC-208ENST00000553753 TNS3Q68CZ2 1445 aa14.54□□□□□ -0.08
HNRNPC-208ENST00000553753 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
HNRNPC-208ENST00000553753 CARD11Q9BXL7 1154 aa14.54□□□□□ -0.08
HNRNPC-208ENST00000553753 QRICH2Q9H0J4 1663 aa14.53□□□□□ -0.08
HNRNPC-208ENST00000553753 ITSN1Q15811 1721 aa14.53□□□□□ -0.08
HNRNPC-208ENST00000553753 CABP2Q9NPB3 220 aa14.52□□□□□ -0.08
HNRNPC-208ENST00000553753 CLSPNQ9HAW4 1339 aa14.52□□□□□ -0.08
HNRNPC-208ENST00000553753 ARHGEF10O15013 1369 aa14.52□□□□□ -0.08
HNRNPC-208ENST00000553753 RALGAPBQ86X10 1494 aa14.52□□□□□ -0.09
HNRNPC-208ENST00000553753 PLEKHG3A1L390 1219 aa14.51□□□□□ -0.09
HNRNPC-208ENST00000553753 EVC2Q86UK5 1308 aa14.51□□□□□ -0.09
HNRNPC-208ENST00000553753 PAK3O75914 559 aaPredicted RBP14.5□□□□□ -0.09
HNRNPC-208ENST00000553753 FNBP4Q8N3X1 1017 aaPredicted RBP14.5□□□□□ -0.09
HNRNPC-208ENST00000553753 CABLES1Q8TDN4 633 aa14.5□□□□□ -0.09
HNRNPC-208ENST00000553753 ACEP12821 1306 aa14.5□□□□□ -0.09
HNRNPC-208ENST00000553753 RXRBP28702 533 aa14.5□□□□□ -0.09
HNRNPC-208ENST00000553753 HAP1P54257 671 aaPredicted RBP14.5□□□□□ -0.09
HNRNPC-208ENST00000553753 QTRT2Q9H974 415 aaKnown RBP14.5□□□□□ -0.09
HNRNPC-208ENST00000553753 USP21Q9UK80 565 aa14.5□□□□□ -0.09
HNRNPC-208ENST00000553753 POLR3AO14802 1390 aaPredicted RBP14.49□□□□□ -0.09
HNRNPC-208ENST00000553753 TRPM3Q9HCF6 1732 aaPredicted RBP14.49□□□□□ -0.09
HNRNPC-208ENST00000553753 PLEKHG5O94827 1062 aa14.49□□□□□ -0.09
HNRNPC-208ENST00000553753 TIMELESSQ9UNS1 1208 aa14.49□□□□□ -0.09
HNRNPC-208ENST00000553753 TOPAZ1Q8N9V7 1692 aa14.48□□□□□ -0.09
HNRNPC-208ENST00000553753 PPIP5K1Q6PFW1 1433 aa14.48□□□□□ -0.09
HNRNPC-208ENST00000553753 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms