RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 PRAM1Q96QH2 718 aa11.94□□□□□ -0.5
PCNX1-204ENST00000553428 SIN3AQ96ST3 1273 aa11.94□□□□□ -0.5
PCNX1-204ENST00000553428 POGKQ9P215 609 aa11.94□□□□□ -0.5
PCNX1-204ENST00000553428 MED1Q15648 1581 aaPredicted RBP11.92□□□□□ -0.5
PCNX1-204ENST00000553428 NEUROD1Q13562 356 aa11.92□□□□□ -0.5
PCNX1-204ENST00000553428 LRRC59Q96AG4 307 aaKnown RBP11.92□□□□□ -0.5
PCNX1-204ENST00000553428 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
PCNX1-204ENST00000553428 COL16A1Q07092 1604 aaPredicted RBP11.92□□□□□ -0.5
PCNX1-204ENST00000553428 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
PCNX1-204ENST00000553428 PHLPP1O60346 1717 aa11.91□□□□□ -0.5
PCNX1-204ENST00000553428 EIF3AQ14152 1382 aaKnown RBP11.91□□□□□ -0.5
PCNX1-204ENST00000553428 NPHP3Q7Z494 1330 aa11.9□□□□□ -0.5
PCNX1-204ENST00000553428 ESCO1Q5FWF5 840 aa11.9□□□□□ -0.5
PCNX1-204ENST00000553428 ORAI2Q96SN7 254 aa11.9□□□□□ -0.5
PCNX1-204ENST00000553428 KIAA1210Q9ULL0 1709 aa11.9□□□□□ -0.5
PCNX1-204ENST00000553428 SOS2Q07890 1332 aaPredicted RBP11.89□□□□□ -0.51
PCNX1-204ENST00000553428 ADGRB2O60241 1585 aa11.88□□□□□ -0.51
PCNX1-204ENST00000553428 ANKARQ7Z5J8 1434 aa11.88□□□□□ -0.51
PCNX1-204ENST00000553428 SAFB2Q14151 953 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCNX1-204ENST00000553428 PHF23Q9BUL5 403 aaPredicted RBP11.88□□□□□ -0.51
PCNX1-204ENST00000553428 NHSL1Q5SYE7 1610 aa11.88□□□□□ -0.51
PCNX1-204ENST00000553428 TONSLQ96HA7 1378 aa11.88□□□□□ -0.51
PCNX1-204ENST00000553428 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
PCNX1-204ENST00000553428 NBPF1Q3BBV0 1214 aa11.87□□□□□ -0.51
PCNX1-204ENST00000553428 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
PCNX1-204ENST00000553428 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
PCNX1-204ENST00000553428 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
PCNX1-204ENST00000553428 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
PCNX1-204ENST00000553428 FOXO3O43524 673 aa11.85□□□□□ -0.51
PCNX1-204ENST00000553428 DDX17Q92841 729 aaKnown RBP11.85□□□□□ -0.51
PCNX1-204ENST00000553428 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
PCNX1-204ENST00000553428 PHF8Q9UPP1 1060 aa11.85□□□□□ -0.51
PCNX1-204ENST00000553428 SHPRHQ149N8 1683 aa11.84□□□□□ -0.51
PCNX1-204ENST00000553428 ROCK2O75116 1388 aaKnown RBP11.84□□□□□ -0.51
PCNX1-204ENST00000553428 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
PCNX1-204ENST00000553428 PNPLA6Q8IY17 1366 aa11.84□□□□□ -0.51
PCNX1-204ENST00000553428 HIRIP3Q9BW71 556 aaPredicted RBP11.84□□□□□ -0.51
PCNX1-204ENST00000553428 CENPJQ9HC77 1338 aaPredicted RBP11.84□□□□□ -0.51
PCNX1-204ENST00000553428 TULP4Q9NRJ4 1543 aa11.83□□□□□ -0.52
PCNX1-204ENST00000553428 PSME1Q06323 249 aa11.83□□□□□ -0.52
PCNX1-204ENST00000553428 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
PCNX1-204ENST00000553428 KIF1AQ12756 1690 aa11.83□□□□□ -0.52
PCNX1-204ENST00000553428 ARHGEF28Q8N1W1 1705 aaKnown RBP11.83□□□□□ -0.52
PCNX1-204ENST00000553428 PXDNQ92626 1479 aa11.83□□□□□ -0.52
PCNX1-204ENST00000553428 NBPF8Q3BBV2 869 aa11.82□□□□□ -0.52
PCNX1-204ENST00000553428 MEX3CQ5U5Q3 659 aaKnown RBP11.81□□□□□ -0.52
PCNX1-204ENST00000553428 KRT28Q7Z3Y7 464 aa11.81□□□□□ -0.52
PCNX1-204ENST00000553428 TRPM1Q7Z4N2 1603 aa11.81□□□□□ -0.52
PCNX1-204ENST00000553428 PRR36Q9H6K5 1346 aa11.81□□□□□ -0.52
PCNX1-204ENST00000553428 SBNO1A3KN83 1393 aa11.8□□□□□ -0.52
PCNX1-204ENST00000553428 LRP6O75581 1613 aa11.8□□□□□ -0.52
PCNX1-204ENST00000553428 ILDR2Q71H61 639 aa11.8□□□□□ -0.52
PCNX1-204ENST00000553428 CDK19Q9BWU1 502 aa11.8□□□□□ -0.52
PCNX1-204ENST00000553428 SPATA31A3Q5VYP0 1347 aa11.8□□□□□ -0.52
PCNX1-204ENST00000553428 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
PCNX1-204ENST00000553428 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
PCNX1-204ENST00000553428 ZNF772Q68DY9 489 aaPredicted RBP11.79□□□□□ -0.52
PCNX1-204ENST00000553428 NUTM2AQ8IVF1 878 aaPredicted RBP11.79□□□□□ -0.52
PCNX1-204ENST00000553428 NUDT16Q96DE0 195 aaKnown RBP11.79□□□□□ -0.52
PCNX1-204ENST00000553428 RGS17Q9UGC6 210 aaPredicted RBP11.79□□□□□ -0.52
PCNX1-204ENST00000553428 CCDC61Q9Y6R9 512 aa11.79□□□□□ -0.52
PCNX1-204ENST00000553428 ATP7BP35670 1465 aa11.78□□□□□ -0.52
PCNX1-204ENST00000553428 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
PCNX1-204ENST00000553428 XPCQ01831 940 aaPredicted RBP11.78□□□□□ -0.52
PCNX1-204ENST00000553428 CARD11Q9BXL7 1154 aa11.78□□□□□ -0.52
PCNX1-204ENST00000553428 USP32Q8NFA0 1604 aa11.78□□□□□ -0.52
PCNX1-204ENST00000553428 TNS3Q68CZ2 1445 aa11.77□□□□□ -0.52
PCNX1-204ENST00000553428 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
PCNX1-204ENST00000553428 PMFBP1Q8TBY8 1022 aa11.77□□□□□ -0.53
PCNX1-204ENST00000553428 EVC2Q86UK5 1308 aa11.77□□□□□ -0.53
PCNX1-204ENST00000553428 ARHGEF10O15013 1369 aa11.77□□□□□ -0.53
PCNX1-204ENST00000553428 SBNO2Q9Y2G9 1366 aa11.77□□□□□ -0.53
PCNX1-204ENST00000553428 COL22A1Q8NFW1 1626 aaPredicted RBP11.76□□□□□ -0.53
PCNX1-204ENST00000553428 SRPK2P78362 688 aaKnown RBP11.76□□□□□ -0.53
PCNX1-204ENST00000553428 NGDNQ8NEJ9 315 aaKnown RBP11.76□□□□□ -0.53
PCNX1-204ENST00000553428 POLR3AO14802 1390 aaPredicted RBP11.75□□□□□ -0.53
PCNX1-204ENST00000553428 SOCS7O14512 581 aa11.74□□□□□ -0.53
PCNX1-204ENST00000553428 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
PCNX1-204ENST00000553428 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
PCNX1-204ENST00000553428 BRD4O60885 1362 aaPredicted RBP11.74□□□□□ -0.53
PCNX1-204ENST00000553428 ADAMTS2O95450 1211 aa11.73□□□□□ -0.53
PCNX1-204ENST00000553428 AFF2P51816 1311 aa11.73□□□□□ -0.53
PCNX1-204ENST00000553428 CCER1Q8TC90 406 aaPredicted RBP11.73□□□□□ -0.53
PCNX1-204ENST00000553428 C8orf37Q96NL8 207 aa11.73□□□□□ -0.53
PCNX1-204ENST00000553428 ITSN1Q15811 1721 aa11.72□□□□□ -0.53
PCNX1-204ENST00000553428 ATAD2Q6PL18 1390 aa11.72□□□□□ -0.53
PCNX1-204ENST00000553428 ACEP12821 1306 aa11.72□□□□□ -0.53
PCNX1-204ENST00000553428 FNBP4Q8N3X1 1017 aaPredicted RBP11.72□□□□□ -0.53
PCNX1-204ENST00000553428 NGLY1Q96IV0 654 aa11.72□□□□□ -0.53
PCNX1-204ENST00000553428 PUS7Q96PZ0 661 aaKnown RBP11.72□□□□□ -0.53
PCNX1-204ENST00000553428 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
PCNX1-204ENST00000553428 RGPD8O14715 1765 aaPredicted RBP11.72□□□□□ -0.53
PCNX1-204ENST00000553428 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.53
PCNX1-204ENST00000553428 PPIP5K1Q6PFW1 1433 aa11.71□□□□□ -0.53
PCNX1-204ENST00000553428 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
PCNX1-204ENST00000553428 LMOD2Q6P5Q4 547 aa11.71□□□□□ -0.53
PCNX1-204ENST00000553428 TOPAZ1Q8N9V7 1692 aa11.7□□□□□ -0.54
PCNX1-204ENST00000553428 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
PCNX1-204ENST00000553428 RXRBP28702 533 aa11.69□□□□□ -0.54
PCNX1-204ENST00000553428 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms