RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 YTHDC2Q9H6S0 1430 aaKnown RBP26.27■■□□□ 1.8
PNN-202ENST00000553331 MYOM2P54296 1465 aa26.27■■□□□ 1.8
PNN-202ENST00000553331 LRP6O75581 1613 aa26.27■■□□□ 1.8
PNN-202ENST00000553331 KNDC1Q76NI1 1749 aa26.26■■□□□ 1.79
PNN-202ENST00000553331 PLEKHH1Q9ULM0 1364 aa26.26■■□□□ 1.79
PNN-202ENST00000553331 TECPR2O15040 1411 aa26.25■■□□□ 1.79
PNN-202ENST00000553331 ABCC11Q96J66 1382 aa26.25■■□□□ 1.79
PNN-202ENST00000553331 NUTM2FA1L443 756 aa26.25■■□□□ 1.79
PNN-202ENST00000553331 LRRC59Q96AG4 307 aaKnown RBP26.25■■□□□ 1.79
PNN-202ENST00000553331 NRXN1Q9ULB1 1477 aa26.24■■□□□ 1.79
PNN-202ENST00000553331 DCAF11Q8TEB1 546 aa26.23■■□□□ 1.79
PNN-202ENST00000553331 DHX57Q6P158 1386 aaKnown RBP26.22■■□□□ 1.79
PNN-202ENST00000553331 LAMC1P11047 1609 aa26.22■■□□□ 1.79
PNN-202ENST00000553331 CDC42BPGQ6DT37 1551 aa26.22■■□□□ 1.79
PNN-202ENST00000553331 ESCO1Q5FWF5 840 aa26.22■■□□□ 1.79
PNN-202ENST00000553331 SAFB2Q14151 953 aaKnown RBP eCLIP26.19■■□□□ 1.78
PNN-202ENST00000553331 PNPLA6Q8IY17 1366 aa26.16■■□□□ 1.78
PNN-202ENST00000553331 PRAM1Q96QH2 718 aa26.15■■□□□ 1.78
PNN-202ENST00000553331 POGKQ9P215 609 aa26.14■■□□□ 1.78
PNN-202ENST00000553331 SOS2Q07890 1332 aaPredicted RBP26.14■■□□□ 1.77
PNN-202ENST00000553331 XPCQ01831 940 aaPredicted RBP26.13■■□□□ 1.77
PNN-202ENST00000553331 SIRT1Q96EB6 747 aa26.13■■□□□ 1.77
PNN-202ENST00000553331 FMN2Q9NZ56 1722 aa26.12■■□□□ 1.77
PNN-202ENST00000553331 FOXO3O43524 673 aa26.12■■□□□ 1.77
PNN-202ENST00000553331 ZNF772Q68DY9 489 aaPredicted RBP26.12■■□□□ 1.77
PNN-202ENST00000553331 TRAK1Q9UPV9 953 aa26.12■■□□□ 1.77
PNN-202ENST00000553331 NPHP3Q7Z494 1330 aa26.11■■□□□ 1.77
PNN-202ENST00000553331 C8orf37Q96NL8 207 aa26.1■■□□□ 1.77
PNN-202ENST00000553331 ADAMTS2O95450 1211 aa26.09■■□□□ 1.77
PNN-202ENST00000553331 RGPD8O14715 1765 aaPredicted RBP26.08■■□□□ 1.77
PNN-202ENST00000553331 AFF2P51816 1311 aa26.08■■□□□ 1.77
PNN-202ENST00000553331 ADGRB1O14514 1584 aa26.07■■□□□ 1.76
PNN-202ENST00000553331 STAC3Q96MF2 364 aa26.06■■□□□ 1.76
PNN-202ENST00000553331 DLC1Q96QB1 1528 aa26.05■■□□□ 1.76
PNN-202ENST00000553331 HIRIP3Q9BW71 556 aaPredicted RBP26.04■■□□□ 1.76
PNN-202ENST00000553331 PXDNQ92626 1479 aa26.04■■□□□ 1.76
PNN-202ENST00000553331 NGLY1Q96IV0 654 aa26.02■■□□□ 1.76
PNN-202ENST00000553331 MINK1Q8N4C8 1332 aaPredicted RBP26.02■■□□□ 1.76
PNN-202ENST00000553331 KIF1AQ12756 1690 aa26.02■■□□□ 1.76
PNN-202ENST00000553331 RXRBP28702 533 aa26■■□□□ 1.75
PNN-202ENST00000553331 PHF8Q9UPP1 1060 aa26■■□□□ 1.75
PNN-202ENST00000553331 KRT28Q7Z3Y7 464 aa25.99■■□□□ 1.75
PNN-202ENST00000553331 COL22A1Q8NFW1 1626 aaPredicted RBP25.98■■□□□ 1.75
PNN-202ENST00000553331 PMFBP1Q8TBY8 1022 aa25.96■■□□□ 1.75
PNN-202ENST00000553331 PLEKHG5O94827 1062 aa25.95■■□□□ 1.74
PNN-202ENST00000553331 QTRT2Q9H974 415 aaKnown RBP25.95■■□□□ 1.74
PNN-202ENST00000553331 ADGRB2O60241 1585 aa25.94■■□□□ 1.74
PNN-202ENST00000553331 ARHGEF28Q8N1W1 1705 aaKnown RBP25.94■■□□□ 1.74
PNN-202ENST00000553331 USP32Q8NFA0 1604 aa25.93■■□□□ 1.74
PNN-202ENST00000553331 PSME1Q06323 249 aa25.93■■□□□ 1.74
PNN-202ENST00000553331 SPATA31A3Q5VYP0 1347 aa25.92■■□□□ 1.74
PNN-202ENST00000553331 SIN3AQ96ST3 1273 aa25.92■■□□□ 1.74
PNN-202ENST00000553331 NEUROD1Q13562 356 aa25.91■■□□□ 1.74
PNN-202ENST00000553331 LMOD2Q6P5Q4 547 aa25.91■■□□□ 1.74
PNN-202ENST00000553331 USP21Q9UK80 565 aa25.91■■□□□ 1.74
PNN-202ENST00000553331 ANKARQ7Z5J8 1434 aa25.9■■□□□ 1.74
PNN-202ENST00000553331 WASLO00401 505 aaPredicted RBP25.9■■□□□ 1.74
PNN-202ENST00000553331 KIAA1210Q9ULL0 1709 aa25.89■■□□□ 1.74
PNN-202ENST00000553331 NBPF1Q3BBV0 1214 aa25.89■■□□□ 1.74
PNN-202ENST00000553331 MARF1Q9Y4F3 1742 aaKnown RBP25.88■■□□□ 1.73
PNN-202ENST00000553331 EIF3AQ14152 1382 aaKnown RBP25.87■■□□□ 1.73
PNN-202ENST00000553331 HAP1P54257 671 aaPredicted RBP25.87■■□□□ 1.73
PNN-202ENST00000553331 RBM6P78332 1123 aaKnown RBP25.87■■□□□ 1.73
PNN-202ENST00000553331 PRR36Q9H6K5 1346 aa25.87■■□□□ 1.73
PNN-202ENST00000553331 L3MBTL2Q969R5 705 aa25.86■■□□□ 1.73
PNN-202ENST00000553331 TULP4Q9NRJ4 1543 aa25.86■■□□□ 1.73
PNN-202ENST00000553331 TNS3Q68CZ2 1445 aa25.86■■□□□ 1.73
PNN-202ENST00000553331 FNBP4Q8N3X1 1017 aaPredicted RBP25.84■■□□□ 1.73
PNN-202ENST00000553331 CABLES1Q8TDN4 633 aa25.84■■□□□ 1.73
PNN-202ENST00000553331 TRPC5Q9UL62 973 aaPredicted RBP25.83■■□□□ 1.73
PNN-202ENST00000553331 SBNO1A3KN83 1393 aa25.82■■□□□ 1.72
PNN-202ENST00000553331 CDK12Q9NYV4 1490 aaPredicted RBP25.82■■□□□ 1.72
PNN-202ENST00000553331 NGDNQ8NEJ9 315 aaKnown RBP25.81■■□□□ 1.72
PNN-202ENST00000553331 CDK19Q9BWU1 502 aa25.81■■□□□ 1.72
PNN-202ENST00000553331 GPRASP1Q5JY77 1395 aa25.81■■□□□ 1.72
PNN-202ENST00000553331 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
PNN-202ENST00000553331 NUDT16Q96DE0 195 aaKnown RBP25.8■■□□□ 1.72
PNN-202ENST00000553331 RGS12O14924 1447 aa25.8■■□□□ 1.72
PNN-202ENST00000553331 ARHGEF10O15013 1369 aa25.78■■□□□ 1.72
PNN-202ENST00000553331 ITSN1Q15811 1721 aa25.77■■□□□ 1.72
PNN-202ENST00000553331 PAK3O75914 559 aaPredicted RBP25.77■■□□□ 1.72
PNN-202ENST00000553331 ATRNO75882 1429 aa25.76■■□□□ 1.71
PNN-202ENST00000553331 BCL9LQ86UU0 1499 aa25.76■■□□□ 1.71
PNN-202ENST00000553331 TRPM3Q9HCF6 1732 aaPredicted RBP25.76■■□□□ 1.71
PNN-202ENST00000553331 ATP7BP35670 1465 aa25.75■■□□□ 1.71
PNN-202ENST00000553331 UPF1Q92900 1129 aaKnown RBP eCLIP25.75■■□□□ 1.71
PNN-202ENST00000553331 ABCA3Q99758 1704 aa25.74■■□□□ 1.71
PNN-202ENST00000553331 CENPJQ9HC77 1338 aaPredicted RBP25.73■■□□□ 1.71
PNN-202ENST00000553331 SRPK2P78362 688 aaKnown RBP25.71■■□□□ 1.71
PNN-202ENST00000553331 UNC5CLQ8IV45 518 aa25.71■■□□□ 1.71
PNN-202ENST00000553331 ALS2Q96Q42 1657 aa25.71■■□□□ 1.71
PNN-202ENST00000553331 QRICH2Q9H0J4 1663 aa25.71■■□□□ 1.71
PNN-202ENST00000553331 TRPM1Q7Z4N2 1603 aa25.7■■□□□ 1.71
PNN-202ENST00000553331 GJD4Q96KN9 370 aaPredicted RBP25.69■■□□□ 1.7
PNN-202ENST00000553331 SLIT2O94813 1529 aa25.68■■□□□ 1.7
PNN-202ENST00000553331 CCDC61Q9Y6R9 512 aa25.68■■□□□ 1.7
PNN-202ENST00000553331 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.68■■□□□ 1.7
PNN-202ENST00000553331 ROCK2O75116 1388 aaKnown RBP25.68■■□□□ 1.7
PNN-202ENST00000553331 PLCH1Q4KWH8 1693 aa25.68■■□□□ 1.7
PNN-202ENST00000553331 CABP2Q9NPB3 220 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms