RNA–Protein interactions for RNA: ENST00000553200.1

NR4A1-218, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-218ENST00000553200 SIRT1Q96EB6 747 aa34.64■■■■□ 3.14
NR4A1-218ENST00000553200 MST1RQ04912 1400 aa34.64■■■■□ 3.14
NR4A1-218ENST00000553200 NBPF8Q3BBV2 869 aa34.62■■■■□ 3.13
NR4A1-218ENST00000553200 PRAM1Q96QH2 718 aa34.62■■■■□ 3.13
NR4A1-218ENST00000553200 HSPA1LP34931 641 aa34.61■■■■□ 3.13
NR4A1-218ENST00000553200 CDC42BPGQ6DT37 1551 aa34.61■■■■□ 3.13
NR4A1-218ENST00000553200 SAFB2Q14151 953 aaKnown RBP eCLIP34.59■■■■□ 3.13
NR4A1-218ENST00000553200 CLSPNQ9HAW4 1339 aa34.58■■■■□ 3.13
NR4A1-218ENST00000553200 CCER1Q8TC90 406 aaPredicted RBP34.55■■■■□ 3.12
NR4A1-218ENST00000553200 FMN2Q9NZ56 1722 aa34.53■■■■□ 3.12
NR4A1-218ENST00000553200 POGKQ9P215 609 aa34.53■■■■□ 3.12
NR4A1-218ENST00000553200 C1orf167Q5SNV9 1468 aa34.52■■■■□ 3.12
NR4A1-218ENST00000553200 BRINP3Q76B58 766 aa34.5■■■■□ 3.11
NR4A1-218ENST00000553200 PHLPP1O60346 1717 aa34.49■■■■□ 3.11
NR4A1-218ENST00000553200 ADGRB2O60241 1585 aa34.49■■■■□ 3.11
NR4A1-218ENST00000553200 ROCK2O75116 1388 aaKnown RBP34.48■■■■□ 3.11
NR4A1-218ENST00000553200 RGPD8O14715 1765 aaPredicted RBP34.46■■■■□ 3.11
NR4A1-218ENST00000553200 MINK1Q8N4C8 1332 aaPredicted RBP34.45■■■■□ 3.11
NR4A1-218ENST00000553200 RALGAPBQ86X10 1494 aa34.45■■■■□ 3.1
NR4A1-218ENST00000553200 NUTM2FA1L443 756 aa34.44■■■■□ 3.1
NR4A1-218ENST00000553200 HIRIP3Q9BW71 556 aaPredicted RBP34.44■■■■□ 3.1
NR4A1-218ENST00000553200 NHSL1Q5SYE7 1610 aa34.44■■■■□ 3.1
NR4A1-218ENST00000553200 AHDC1Q5TGY3 1603 aaPredicted RBP34.44■■■■□ 3.1
NR4A1-218ENST00000553200 GPRASP1Q5JY77 1395 aa34.42■■■■□ 3.1
NR4A1-218ENST00000553200 ORAI2Q96SN7 254 aa34.42■■■■□ 3.1
NR4A1-218ENST00000553200 COL16A1Q07092 1604 aaPredicted RBP34.41■■■■□ 3.1
NR4A1-218ENST00000553200 QRICH2Q9H0J4 1663 aa34.4■■■■□ 3.1
NR4A1-218ENST00000553200 USP32Q8NFA0 1604 aa34.39■■■■□ 3.1
NR4A1-218ENST00000553200 DDX17Q92841 729 aaKnown RBP34.37■■■■□ 3.09
NR4A1-218ENST00000553200 CENPJQ9HC77 1338 aaPredicted RBP34.33■■■■□ 3.09
NR4A1-218ENST00000553200 TIMELESSQ9UNS1 1208 aa34.33■■■■□ 3.09
NR4A1-218ENST00000553200 ESCO1Q5FWF5 840 aa34.32■■■■□ 3.08
NR4A1-218ENST00000553200 WASLO00401 505 aaPredicted RBP34.31■■■■□ 3.08
NR4A1-218ENST00000553200 CARD11Q9BXL7 1154 aa34.3■■■■□ 3.08
NR4A1-218ENST00000553200 TULP4Q9NRJ4 1543 aa34.29■■■■□ 3.08
NR4A1-218ENST00000553200 PRR36Q9H6K5 1346 aa34.28■■■■□ 3.08
NR4A1-218ENST00000553200 KIF1AQ12756 1690 aa34.27■■■■□ 3.08
NR4A1-218ENST00000553200 ANKARQ7Z5J8 1434 aa34.26■■■■□ 3.07
NR4A1-218ENST00000553200 EIF3AQ14152 1382 aaKnown RBP34.23■■■■□ 3.07
NR4A1-218ENST00000553200 ATP7BP35670 1465 aa34.22■■■■□ 3.07
NR4A1-218ENST00000553200 CDK19Q9BWU1 502 aa34.22■■■■□ 3.07
NR4A1-218ENST00000553200 ITSN1Q15811 1721 aa34.2■■■■□ 3.07
NR4A1-218ENST00000553200 SHPRHQ149N8 1683 aa34.19■■■■□ 3.06
NR4A1-218ENST00000553200 FOXO3O43524 673 aa34.19■■■■□ 3.06
NR4A1-218ENST00000553200 PXDNQ92626 1479 aa34.19■■■■□ 3.06
NR4A1-218ENST00000553200 TOPAZ1Q8N9V7 1692 aa34.19■■■■□ 3.06
NR4A1-218ENST00000553200 PHF8Q9UPP1 1060 aa34.18■■■■□ 3.06
NR4A1-218ENST00000553200 SOS2Q07890 1332 aaPredicted RBP34.18■■■■□ 3.06
NR4A1-218ENST00000553200 JCADQ9P266 1359 aa34.18■■■■□ 3.06
NR4A1-218ENST00000553200 MED1Q15648 1581 aaPredicted RBP34.18■■■■□ 3.06
NR4A1-218ENST00000553200 NPHP3Q7Z494 1330 aa34.16■■■■□ 3.06
NR4A1-218ENST00000553200 XPCQ01831 940 aaPredicted RBP34.16■■■■□ 3.06
NR4A1-218ENST00000553200 PMFBP1Q8TBY8 1022 aa34.15■■■■□ 3.06
NR4A1-218ENST00000553200 NUDT16Q96DE0 195 aaKnown RBP34.15■■■■□ 3.06
NR4A1-218ENST00000553200 CABP2Q9NPB3 220 aa34.11■■■■□ 3.05
NR4A1-218ENST00000553200 LRRC59Q96AG4 307 aaKnown RBP34.1■■■■□ 3.05
NR4A1-218ENST00000553200 SRPK2P78362 688 aaKnown RBP34.09■■■■□ 3.05
NR4A1-218ENST00000553200 SBNO2Q9Y2G9 1366 aa34.09■■■■□ 3.05
NR4A1-218ENST00000553200 PNPLA6Q8IY17 1366 aa34.08■■■■□ 3.05
NR4A1-218ENST00000553200 EVC2Q86UK5 1308 aa34.06■■■■□ 3.04
NR4A1-218ENST00000553200 USP47Q96K76 1375 aa34.06■■■■□ 3.04
NR4A1-218ENST00000553200 ST20-MTHFSA0A0A6YYL1 179 aa34.05■■■■□ 3.04
NR4A1-218ENST00000553200 KRT28Q7Z3Y7 464 aa34.05■■■■□ 3.04
NR4A1-218ENST00000553200 LRP6O75581 1613 aa34.04■■■■□ 3.04
NR4A1-218ENST00000553200 TRPM3Q9HCF6 1732 aaPredicted RBP34.04■■■■□ 3.04
NR4A1-218ENST00000553200 CCDC61Q9Y6R9 512 aa34.03■■■■□ 3.04
NR4A1-218ENST00000553200 TESK2Q96S53 571 aa34.01■■■■□ 3.03
NR4A1-218ENST00000553200 COL22A1Q8NFW1 1626 aaPredicted RBP34.01■■■■□ 3.03
NR4A1-218ENST00000553200 PSME1Q06323 249 aa34■■■■□ 3.03
NR4A1-218ENST00000553200 PPIP5K1Q6PFW1 1433 aa34■■■■□ 3.03
NR4A1-218ENST00000553200 SPATA31A6Q5VVP1 1343 aa34■■■■□ 3.03
NR4A1-218ENST00000553200 NGDNQ8NEJ9 315 aaKnown RBP33.98■■■■□ 3.03
NR4A1-218ENST00000553200 SPATA31A3Q5VYP0 1347 aa33.98■■■■□ 3.03
NR4A1-218ENST00000553200 PLEKHG3A1L390 1219 aa33.97■■■■□ 3.03
NR4A1-218ENST00000553200 POLR3AO14802 1390 aaPredicted RBP33.97■■■■□ 3.03
NR4A1-218ENST00000553200 DISP3Q9P2K9 1392 aa33.97■■■■□ 3.03
NR4A1-218ENST00000553200 TNS3Q68CZ2 1445 aa33.96■■■■□ 3.03
NR4A1-218ENST00000553200 ALS2Q96Q42 1657 aa33.95■■■■□ 3.03
NR4A1-218ENST00000553200 ACEP12821 1306 aa33.95■■■■□ 3.03
NR4A1-218ENST00000553200 SBNO1A3KN83 1393 aa33.95■■■■□ 3.02
NR4A1-218ENST00000553200 NUTM2BA6NNL0 878 aaPredicted RBP33.94■■■■□ 3.02
NR4A1-218ENST00000553200 NUTM2EB1AL46 878 aaPredicted RBP33.94■■■■□ 3.02
NR4A1-218ENST00000553200 NUTM2AQ8IVF1 878 aaPredicted RBP33.94■■■■□ 3.02
NR4A1-218ENST00000553200 CABP1Q9NZU7 370 aa33.92■■■■□ 3.02
NR4A1-218ENST00000553200 ATAD2Q6PL18 1390 aa33.89■■■■□ 3.02
NR4A1-218ENST00000553200 AKAP12Q02952 1782 aa33.88■■■■□ 3.01
NR4A1-218ENST00000553200 ABCA3Q99758 1704 aa33.87■■■■□ 3.01
NR4A1-218ENST00000553200 LMOD2Q6P5Q4 547 aa33.84■■■■□ 3.01
NR4A1-218ENST00000553200 MARF1Q9Y4F3 1742 aaKnown RBP33.82■■■■□ 3
NR4A1-218ENST00000553200 PAK3O75914 559 aaPredicted RBP33.82■■■■□ 3
NR4A1-218ENST00000553200 PHF23Q9BUL5 403 aaPredicted RBP33.82■■■■□ 3
NR4A1-218ENST00000553200 RGS17Q9UGC6 210 aaPredicted RBP33.82■■■■□ 3
NR4A1-218ENST00000553200 ARHGEF10O15013 1369 aa33.82■■■■□ 3
NR4A1-218ENST00000553200 MEX3CQ5U5Q3 659 aaKnown RBP33.81■■■■□ 3
NR4A1-218ENST00000553200 CRYBG1Q9Y4K1 1723 aa33.81■■■■□ 3
NR4A1-218ENST00000553200 PLEKHG5O94827 1062 aa33.8■■■■□ 3
NR4A1-218ENST00000553200 USP6P35125 1406 aa33.79■■■■□ 3
NR4A1-218ENST00000553200 ADAMTS2O95450 1211 aa33.79■■■■□ 3
NR4A1-218ENST00000553200 HSPA5P11021 654 aaKnown RBP33.79■■■■□ 3
NR4A1-218ENST00000553200 CABLES1Q8TDN4 633 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms