RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.14□□□□□ -1.11
CKAP4-203ENST00000553039 CCDC9Q9Y3X0 531 aaKnown RBP8.14□□□□□ -1.11
CKAP4-203ENST00000553039 LRRIQ1Q96JM4 1722 aa8.14□□□□□ -1.11
CKAP4-203ENST00000553039 BCL9LQ86UU0 1499 aa8.13□□□□□ -1.11
CKAP4-203ENST00000553039 ORAI2Q96SN7 254 aa8.13□□□□□ -1.11
CKAP4-203ENST00000553039 SPON1Q9HCB6 807 aa8.13□□□□□ -1.11
CKAP4-203ENST00000553039 ASXL1Q8IXJ9 1541 aa8.13□□□□□ -1.11
CKAP4-203ENST00000553039 MST1RQ04912 1400 aa8.12□□□□□ -1.11
CKAP4-203ENST00000553039 A0A0G2JS52 829 aa8.12□□□□□ -1.11
CKAP4-203ENST00000553039 MYT1Q01538 1121 aa8.12□□□□□ -1.11
CKAP4-203ENST00000553039 VPS72Q15906 364 aa8.12□□□□□ -1.11
CKAP4-203ENST00000553039 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.12□□□□□ -1.11
CKAP4-203ENST00000553039 PIK3C2BO00750 1634 aa8.11□□□□□ -1.11
CKAP4-203ENST00000553039 NPHP3Q7Z494 1330 aa8.11□□□□□ -1.11
CKAP4-203ENST00000553039 CHD2O14647 1828 aaKnown RBP8.11□□□□□ -1.11
CKAP4-203ENST00000553039 DUOX2Q9NRD8 1548 aa8.11□□□□□ -1.11
CKAP4-203ENST00000553039 RPRD2Q5VT52 1461 aaKnown RBP8.11□□□□□ -1.11
CKAP4-203ENST00000553039 NOS1P29475 1434 aa8.11□□□□□ -1.11
CKAP4-203ENST00000553039 KIF15Q9NS87 1388 aa8.1□□□□□ -1.11
CKAP4-203ENST00000553039 KCNQ2O43526 872 aa8.1□□□□□ -1.11
CKAP4-203ENST00000553039 ESCO1Q5FWF5 840 aa8.1□□□□□ -1.11
CKAP4-203ENST00000553039 ZFYVE9O95405 1425 aa8.1□□□□□ -1.11
CKAP4-203ENST00000553039 ADAMTS13Q76LX8 1427 aa8.1□□□□□ -1.11
CKAP4-203ENST00000553039 ARHGEF5Q12774 1597 aa8.1□□□□□ -1.11
CKAP4-203ENST00000553039 LRPPRCP42704 1394 aaKnown RBP8.1□□□□□ -1.11
CKAP4-203ENST00000553039 NHSL1Q5SYE7 1610 aa8.09□□□□□ -1.11
CKAP4-203ENST00000553039 ERBINQ96RT1 1412 aa8.09□□□□□ -1.11
CKAP4-203ENST00000553039 MAST1Q9Y2H9 1570 aa8.09□□□□□ -1.11
CKAP4-203ENST00000553039 EIF2AK4Q9P2K8 1649 aaKnown RBP8.08□□□□□ -1.12
CKAP4-203ENST00000553039 FOXO3O43524 673 aa8.08□□□□□ -1.12
CKAP4-203ENST00000553039 EZH2Q15910 746 aaKnown RBP8.08□□□□□ -1.12
CKAP4-203ENST00000553039 MYOM3Q5VTT5 1437 aa8.08□□□□□ -1.12
CKAP4-203ENST00000553039 C1orf167Q5SNV9 1468 aa8.07□□□□□ -1.12
CKAP4-203ENST00000553039 RALGAPBQ86X10 1494 aa8.07□□□□□ -1.12
CKAP4-203ENST00000553039 FAM196AQ6ZSG2 479 aa8.07□□□□□ -1.12
CKAP4-203ENST00000553039 CAMKK2Q96RR4 588 aa8.07□□□□□ -1.12
CKAP4-203ENST00000553039 APBA3O96018 575 aa8.06□□□□□ -1.12
CKAP4-203ENST00000553039 ADGRB3O60242 1522 aa8.06□□□□□ -1.12
CKAP4-203ENST00000553039 EHBP1L1Q8N3D4 1523 aa8.06□□□□□ -1.12
CKAP4-203ENST00000553039 NINLQ9Y2I6 1382 aa8.06□□□□□ -1.12
CKAP4-203ENST00000553039 UNC13BO14795 1591 aa8.05□□□□□ -1.12
CKAP4-203ENST00000553039 PTPRUQ92729 1446 aa8.05□□□□□ -1.12
CKAP4-203ENST00000553039 ADGRL3Q9HAR2 1447 aa8.05□□□□□ -1.12
CKAP4-203ENST00000553039 PSME1Q06323 249 aa8.05□□□□□ -1.12
CKAP4-203ENST00000553039 ZNF326Q5BKZ1 582 aaKnown RBP8.05□□□□□ -1.12
CKAP4-203ENST00000553039 PAXIP1Q6ZW49 1069 aaPredicted RBP8.05□□□□□ -1.12
CKAP4-203ENST00000553039 CHIC2Q9UKJ5 165 aa8.05□□□□□ -1.12
CKAP4-203ENST00000553039 ANKRD30AQ9BXX3 1397 aa8.05□□□□□ -1.12
CKAP4-203ENST00000553039 LMTK2Q8IWU2 1503 aa8.04□□□□□ -1.12
CKAP4-203ENST00000553039 GIGYF1O75420 1035 aaPredicted RBP8.04□□□□□ -1.12
CKAP4-203ENST00000553039 FAM98CQ17RN3 349 aaKnown RBP8.04□□□□□ -1.12
CKAP4-203ENST00000553039 PARD3Q8TEW0 1356 aa8.04□□□□□ -1.12
CKAP4-203ENST00000553039 TRPM2O94759 1503 aa8.03□□□□□ -1.12
CKAP4-203ENST00000553039 TRIM37O94972 964 aa8.03□□□□□ -1.12
CKAP4-203ENST00000553039 XPCQ01831 940 aaPredicted RBP8.03□□□□□ -1.12
CKAP4-203ENST00000553039 CEP152O94986 1710 aa8.03□□□□□ -1.12
CKAP4-203ENST00000553039 MYOM2P54296 1465 aa8.02□□□□□ -1.13
CKAP4-203ENST00000553039 FAM83GA6ND36 823 aa8.02□□□□□ -1.13
CKAP4-203ENST00000553039 KRT28Q7Z3Y7 464 aa8.02□□□□□ -1.13
CKAP4-203ENST00000553039 SPOCK2Q92563 424 aa8.02□□□□□ -1.13
CKAP4-203ENST00000553039 SLIT2O94813 1529 aa8.02□□□□□ -1.13
CKAP4-203ENST00000553039 SPATA31A3Q5VYP0 1347 aa8.02□□□□□ -1.13
CKAP4-203ENST00000553039 METP08581 1390 aa8.01□□□□□ -1.13
CKAP4-203ENST00000553039 ECM2O94769 699 aaPredicted RBP8.01□□□□□ -1.13
CKAP4-203ENST00000553039 DISP2A7MBM2 1401 aa8.01□□□□□ -1.13
CKAP4-203ENST00000553039 EP400Q96L91 3159 aa8□□□□□ -1.13
CKAP4-203ENST00000553039 C11orf95C9JLR9 678 aaPredicted RBP8□□□□□ -1.13
CKAP4-203ENST00000553039 VGFO15240 615 aaPredicted RBP8□□□□□ -1.13
CKAP4-203ENST00000553039 FAM182BQ5T319 152 aa8□□□□□ -1.13
CKAP4-203ENST00000553039 LMOD2Q6P5Q4 547 aa8□□□□□ -1.13
CKAP4-203ENST00000553039 ABCC5O15440 1437 aa7.99□□□□□ -1.13
CKAP4-203ENST00000553039 PDE3BQ13370 1112 aa7.99□□□□□ -1.13
CKAP4-203ENST00000553039 SPRYD3Q8NCJ5 442 aa7.99□□□□□ -1.13
CKAP4-203ENST00000553039 CFAP44Q96MT7 982 aa7.99□□□□□ -1.13
CKAP4-203ENST00000553039 BTG4Q9NY30 223 aa7.99□□□□□ -1.13
CKAP4-203ENST00000553039 CABLES1Q8TDN4 633 aa7.98□□□□□ -1.13
CKAP4-203ENST00000553039 SYT17Q9BSW7 474 aa7.98□□□□□ -1.13
CKAP4-203ENST00000553039 PLEKHG5O94827 1062 aa7.97□□□□□ -1.13
CKAP4-203ENST00000553039 GLI3P10071 1580 aa7.97□□□□□ -1.13
CKAP4-203ENST00000553039 SPHKAPQ2M3C7 1700 aa7.96□□□□□ -1.14
CKAP4-203ENST00000553039 GPR162Q16538 588 aa7.96□□□□□ -1.14
CKAP4-203ENST00000553039 SPATA31A5Q5VU36 1347 aa7.96□□□□□ -1.14
CKAP4-203ENST00000553039 SPATA31A7Q8IWB4 1347 aa7.96□□□□□ -1.14
CKAP4-203ENST00000553039 TMEM131LA2VDJ0 1609 aa7.96□□□□□ -1.14
CKAP4-203ENST00000553039 NUTM2FA1L443 756 aa7.95□□□□□ -1.14
CKAP4-203ENST00000553039 KANK4Q5T7N3 995 aaPredicted RBP7.95□□□□□ -1.14
CKAP4-203ENST00000553039 TSHZ2Q9NRE2 1034 aa7.95□□□□□ -1.14
CKAP4-203ENST00000553039 COL22A1Q8NFW1 1626 aaPredicted RBP7.95□□□□□ -1.14
CKAP4-203ENST00000553039 HFM1A2PYH4 1435 aa7.95□□□□□ -1.14
CKAP4-203ENST00000553039 ROBO2Q9HCK4 1378 aa7.94□□□□□ -1.14
CKAP4-203ENST00000553039 ADGRL2O95490 1459 aa7.94□□□□□ -1.14
CKAP4-203ENST00000553039 LAMC1P11047 1609 aa7.93□□□□□ -1.14
CKAP4-203ENST00000553039 PLSCR1O15162 318 aa7.93□□□□□ -1.14
CKAP4-203ENST00000553039 RGL2O15211 777 aa7.93□□□□□ -1.14
CKAP4-203ENST00000553039 EVA1CP58658 441 aa7.93□□□□□ -1.14
CKAP4-203ENST00000553039 KLHL34Q8N239 644 aa7.93□□□□□ -1.14
CKAP4-203ENST00000553039 FHDC1Q9C0D6 1143 aaPredicted RBP7.93□□□□□ -1.14
CKAP4-203ENST00000553039 PHF8Q9UPP1 1060 aa7.93□□□□□ -1.14
CKAP4-203ENST00000553039 ARHGEF10O15013 1369 aa7.93□□□□□ -1.14
CKAP4-203ENST00000553039 DAPK1P53355 1430 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms