RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.53□□□□□ -0.08
TRAFD1-208ENST00000552890 ASXL1Q8IXJ9 1541 aa14.53□□□□□ -0.08
TRAFD1-208ENST00000552890 GPRASP1Q5JY77 1395 aa14.53□□□□□ -0.08
TRAFD1-208ENST00000552890 WAPLQ7Z5K2 1190 aa14.53□□□□□ -0.08
TRAFD1-208ENST00000552890 CDC42BPGQ6DT37 1551 aa14.52□□□□□ -0.08
TRAFD1-208ENST00000552890 CENPJQ9HC77 1338 aaPredicted RBP14.52□□□□□ -0.08
TRAFD1-208ENST00000552890 RBM33Q96EV2 1170 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-208ENST00000552890 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.09
TRAFD1-208ENST00000552890 RALGAPBQ86X10 1494 aa14.5□□□□□ -0.09
TRAFD1-208ENST00000552890 NBPF1Q3BBV0 1214 aa14.5□□□□□ -0.09
TRAFD1-208ENST00000552890 ANKARQ7Z5J8 1434 aa14.49□□□□□ -0.09
TRAFD1-208ENST00000552890 TRPM1Q7Z4N2 1603 aa14.49□□□□□ -0.09
TRAFD1-208ENST00000552890 MST1RQ04912 1400 aa14.49□□□□□ -0.09
TRAFD1-208ENST00000552890 NPHP3Q7Z494 1330 aa14.48□□□□□ -0.09
TRAFD1-208ENST00000552890 WASLO00401 505 aaPredicted RBP14.48□□□□□ -0.09
TRAFD1-208ENST00000552890 EVC2Q86UK5 1308 aa14.47□□□□□ -0.09
TRAFD1-208ENST00000552890 NALCNQ8IZF0 1738 aa14.47□□□□□ -0.09
TRAFD1-208ENST00000552890 C1orf167Q5SNV9 1468 aa14.47□□□□□ -0.09
TRAFD1-208ENST00000552890 ADGRB2O60241 1585 aa14.47□□□□□ -0.09
TRAFD1-208ENST00000552890 SBNO2Q9Y2G9 1366 aa14.47□□□□□ -0.09
TRAFD1-208ENST00000552890 PSME1Q06323 249 aa14.46□□□□□ -0.09
TRAFD1-208ENST00000552890 SAFB2Q14151 953 aaKnown RBP eCLIP14.46□□□□□ -0.09
TRAFD1-208ENST00000552890 NBPF8Q3BBV2 869 aa14.46□□□□□ -0.09
TRAFD1-208ENST00000552890 CDCA8Q53HL2 280 aa14.46□□□□□ -0.09
TRAFD1-208ENST00000552890 ESCO1Q5FWF5 840 aa14.46□□□□□ -0.09
TRAFD1-208ENST00000552890 BRINP3Q76B58 766 aa14.46□□□□□ -0.09
TRAFD1-208ENST00000552890 LRRC59Q96AG4 307 aaKnown RBP14.46□□□□□ -0.09
TRAFD1-208ENST00000552890 PUS7Q96PZ0 661 aaKnown RBP14.45□□□□□ -0.1
TRAFD1-208ENST00000552890 ROBO1Q9Y6N7 1651 aa14.45□□□□□ -0.1
TRAFD1-208ENST00000552890 PLEKHH1Q9ULM0 1364 aa14.45□□□□□ -0.1
TRAFD1-208ENST00000552890 MINK1Q8N4C8 1332 aaPredicted RBP14.44□□□□□ -0.1
TRAFD1-208ENST00000552890 ARHGEF28Q8N1W1 1705 aaKnown RBP14.44□□□□□ -0.1
TRAFD1-208ENST00000552890 HSPA1LP34931 641 aa14.43□□□□□ -0.1
TRAFD1-208ENST00000552890 CCDC61Q9Y6R9 512 aa14.43□□□□□ -0.1
TRAFD1-208ENST00000552890 AHDC1Q5TGY3 1603 aaPredicted RBP14.42□□□□□ -0.1
TRAFD1-208ENST00000552890 SRPK2P78362 688 aaKnown RBP14.42□□□□□ -0.1
TRAFD1-208ENST00000552890 PHF8Q9UPP1 1060 aa14.42□□□□□ -0.1
TRAFD1-208ENST00000552890 JCADQ9P266 1359 aa14.42□□□□□ -0.1
TRAFD1-208ENST00000552890 TULP4Q9NRJ4 1543 aa14.41□□□□□ -0.1
TRAFD1-208ENST00000552890 CDK19Q9BWU1 502 aa14.41□□□□□ -0.1
TRAFD1-208ENST00000552890 BRD4O60885 1362 aaPredicted RBP14.41□□□□□ -0.1
TRAFD1-208ENST00000552890 KIF1AQ12756 1690 aa14.41□□□□□ -0.1
TRAFD1-208ENST00000552890 ATAD2Q6PL18 1390 aa14.4□□□□□ -0.1
TRAFD1-208ENST00000552890 HIRIP3Q9BW71 556 aaPredicted RBP14.4□□□□□ -0.1
TRAFD1-208ENST00000552890 FMN2Q9NZ56 1722 aa14.4□□□□□ -0.1
TRAFD1-208ENST00000552890 SPATA31A6Q5VVP1 1343 aa14.4□□□□□ -0.1
TRAFD1-208ENST00000552890 NGDNQ8NEJ9 315 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-208ENST00000552890 NUDT16Q96DE0 195 aaKnown RBP14.39□□□□□ -0.11
TRAFD1-208ENST00000552890 ORAI2Q96SN7 254 aa14.38□□□□□ -0.11
TRAFD1-208ENST00000552890 SOS2Q07890 1332 aaPredicted RBP14.38□□□□□ -0.11
TRAFD1-208ENST00000552890 NINLQ9Y2I6 1382 aa14.37□□□□□ -0.11
TRAFD1-208ENST00000552890 PLEKHG3A1L390 1219 aa14.37□□□□□ -0.11
TRAFD1-208ENST00000552890 EIF4G2P78344 907 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRAFD1-208ENST00000552890 TMF1P82094 1093 aa14.37□□□□□ -0.11
TRAFD1-208ENST00000552890 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
TRAFD1-208ENST00000552890 PHLPP1O60346 1717 aa14.37□□□□□ -0.11
TRAFD1-208ENST00000552890 ITSN1Q15811 1721 aa14.37□□□□□ -0.11
TRAFD1-208ENST00000552890 USP47Q96K76 1375 aa14.36□□□□□ -0.11
TRAFD1-208ENST00000552890 FOXO3O43524 673 aa14.36□□□□□ -0.11
TRAFD1-208ENST00000552890 QRICH2Q9H0J4 1663 aa14.36□□□□□ -0.11
TRAFD1-208ENST00000552890 ARHGEF10O15013 1369 aa14.35□□□□□ -0.11
TRAFD1-208ENST00000552890 NHSL1Q5SYE7 1610 aa14.35□□□□□ -0.11
TRAFD1-208ENST00000552890 NUTM2FA1L443 756 aa14.35□□□□□ -0.11
TRAFD1-208ENST00000552890 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
TRAFD1-208ENST00000552890 SBNO1A3KN83 1393 aa14.34□□□□□ -0.11
TRAFD1-208ENST00000552890 ST20-MTHFSA0A0A6YYL1 179 aa14.34□□□□□ -0.11
TRAFD1-208ENST00000552890 KRT28Q7Z3Y7 464 aa14.34□□□□□ -0.11
TRAFD1-208ENST00000552890 TERF2IPQ9NYB0 399 aa14.32□□□□□ -0.12
TRAFD1-208ENST00000552890 POLR3AO14802 1390 aaPredicted RBP14.32□□□□□ -0.12
TRAFD1-208ENST00000552890 ATP7BP35670 1465 aa14.31□□□□□ -0.12
TRAFD1-208ENST00000552890 COL16A1Q07092 1604 aaPredicted RBP14.31□□□□□ -0.12
TRAFD1-208ENST00000552890 HDGFL2Q7Z4V5 671 aaPredicted RBP14.31□□□□□ -0.12
TRAFD1-208ENST00000552890 PMFBP1Q8TBY8 1022 aa14.3□□□□□ -0.12
TRAFD1-208ENST00000552890 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
TRAFD1-208ENST00000552890 SPATA31A3Q5VYP0 1347 aa14.3□□□□□ -0.12
TRAFD1-208ENST00000552890 PPIP5K1Q6PFW1 1433 aa14.3□□□□□ -0.12
TRAFD1-208ENST00000552890 MEX3CQ5U5Q3 659 aaKnown RBP14.29□□□□□ -0.12
TRAFD1-208ENST00000552890 PRR36Q9H6K5 1346 aa14.29□□□□□ -0.12
TRAFD1-208ENST00000552890 SHPRHQ149N8 1683 aa14.29□□□□□ -0.12
TRAFD1-208ENST00000552890 ACEP12821 1306 aa14.28□□□□□ -0.12
TRAFD1-208ENST00000552890 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
TRAFD1-208ENST00000552890 TNS3Q68CZ2 1445 aa14.28□□□□□ -0.12
TRAFD1-208ENST00000552890 PXDNQ92626 1479 aa14.28□□□□□ -0.12
TRAFD1-208ENST00000552890 TESK2Q96S53 571 aa14.28□□□□□ -0.12
TRAFD1-208ENST00000552890 CABP1Q9NZU7 370 aa14.28□□□□□ -0.12
TRAFD1-208ENST00000552890 PNPLA6Q8IY17 1366 aa14.26□□□□□ -0.13
TRAFD1-208ENST00000552890 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
TRAFD1-208ENST00000552890 PAK3O75914 559 aaPredicted RBP14.26□□□□□ -0.13
TRAFD1-208ENST00000552890 LMOD2Q6P5Q4 547 aa14.26□□□□□ -0.13
TRAFD1-208ENST00000552890 TMC1Q8TDI8 760 aa14.26□□□□□ -0.13
TRAFD1-208ENST00000552890 USP32Q8NFA0 1604 aa14.26□□□□□ -0.13
TRAFD1-208ENST00000552890 NLRP13Q86W25 1043 aa14.25□□□□□ -0.13
TRAFD1-208ENST00000552890 RGPD8O14715 1765 aaPredicted RBP14.24□□□□□ -0.13
TRAFD1-208ENST00000552890 TOPAZ1Q8N9V7 1692 aa14.24□□□□□ -0.13
TRAFD1-208ENST00000552890 ZNF772Q68DY9 489 aaPredicted RBP14.24□□□□□ -0.13
TRAFD1-208ENST00000552890 DDX17Q92841 729 aaKnown RBP14.23□□□□□ -0.13
TRAFD1-208ENST00000552890 KTN1Q86UP2 1357 aaKnown RBP14.22□□□□□ -0.13
TRAFD1-208ENST00000552890 XPCQ01831 940 aaPredicted RBP14.22□□□□□ -0.13
TRAFD1-208ENST00000552890 ABTB2Q8N961 1025 aa14.22□□□□□ -0.13
TRAFD1-208ENST00000552890 USP6P35125 1406 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms