RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 MYOM2P54296 1465 aa23.39■■□□□ 1.34
BRF1-220ENST00000552127 SPHKAPQ2M3C7 1700 aa23.39■■□□□ 1.33
BRF1-220ENST00000552127 BRWD3Q6RI45 1802 aa23.38■■□□□ 1.33
BRF1-220ENST00000552127 NUP155O75694 1391 aa23.37■■□□□ 1.33
BRF1-220ENST00000552127 SF3B2Q13435 895 aaKnown RBP23.36■■□□□ 1.33
BRF1-220ENST00000552127 GLI3P10071 1580 aa23.35■■□□□ 1.33
BRF1-220ENST00000552127 NAIPQ13075 1403 aa23.35■■□□□ 1.33
BRF1-220ENST00000552127 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.35■■□□□ 1.33
BRF1-220ENST00000552127 PSDA5PKW4 1024 aaPredicted RBP23.34■■□□□ 1.33
BRF1-220ENST00000552127 RALGAPBQ86X10 1494 aa23.33■■□□□ 1.33
BRF1-220ENST00000552127 HRCP23327 699 aa23.32■■□□□ 1.32
BRF1-220ENST00000552127 HFM1A2PYH4 1435 aa23.3■■□□□ 1.32
BRF1-220ENST00000552127 ZNF326Q5BKZ1 582 aaKnown RBP23.29■■□□□ 1.32
BRF1-220ENST00000552127 UNC5CLQ8IV45 518 aa23.29■■□□□ 1.32
BRF1-220ENST00000552127 PXDNQ92626 1479 aa23.26■■□□□ 1.31
BRF1-220ENST00000552127 SLIT2O94813 1529 aa23.26■■□□□ 1.31
BRF1-220ENST00000552127 SEPT12Q8IYM1 358 aa23.25■■□□□ 1.31
BRF1-220ENST00000552127 NPHP3Q7Z494 1330 aa23.25■■□□□ 1.31
BRF1-220ENST00000552127 ROBO2Q9HCK4 1378 aa23.25■■□□□ 1.31
BRF1-220ENST00000552127 XPCQ01831 940 aaPredicted RBP23.23■■□□□ 1.31
BRF1-220ENST00000552127 NEXMIFQ5QGS0 1516 aa23.22■■□□□ 1.31
BRF1-220ENST00000552127 CLTCL1P53675 1640 aa23.22■■□□□ 1.31
BRF1-220ENST00000552127 KIF1BO60333 1816 aa23.22■■□□□ 1.31
BRF1-220ENST00000552127 ESCO1Q5FWF5 840 aa23.21■■□□□ 1.31
BRF1-220ENST00000552127 FOXO3O43524 673 aa23.19■■□□□ 1.3
BRF1-220ENST00000552127 BAG6P46379 1132 aa23.19■■□□□ 1.3
BRF1-220ENST00000552127 KRT27Q7Z3Y8 459 aa23.18■■□□□ 1.3
BRF1-220ENST00000552127 YY1P25490 414 aa23.17■■□□□ 1.3
BRF1-220ENST00000552127 USP32Q8NFA0 1604 aa23.15■■□□□ 1.3
BRF1-220ENST00000552127 ONECUT3O60422 494 aaPredicted RBP23.15■■□□□ 1.3
BRF1-220ENST00000552127 VPS72Q15906 364 aa23.14■■□□□ 1.29
BRF1-220ENST00000552127 PRAG1Q86YV5 1406 aa23.14■■□□□ 1.29
BRF1-220ENST00000552127 R3HDM1Q15032 1099 aaKnown RBP23.13■■□□□ 1.29
BRF1-220ENST00000552127 CDC42BPGQ6DT37 1551 aa23.13■■□□□ 1.29
BRF1-220ENST00000552127 LRPPRCP42704 1394 aaKnown RBP23.13■■□□□ 1.29
BRF1-220ENST00000552127 EN1Q05925 392 aaPredicted RBP23.11■■□□□ 1.29
BRF1-220ENST00000552127 CCDC9Q9Y3X0 531 aaKnown RBP23.1■■□□□ 1.29
BRF1-220ENST00000552127 PLCH1Q4KWH8 1693 aa23.09■■□□□ 1.29
BRF1-220ENST00000552127 SPATA31A3Q5VYP0 1347 aa23.08■■□□□ 1.29
BRF1-220ENST00000552127 NWD2Q9ULI1 1742 aa23.08■■□□□ 1.29
BRF1-220ENST00000552127 RGPD1P0DJD0 1748 aa23.08■■□□□ 1.28
BRF1-220ENST00000552127 NUTM2FA1L443 756 aa23.06■■□□□ 1.28
BRF1-220ENST00000552127 A0A0G2JS52 829 aa23.05■■□□□ 1.28
BRF1-220ENST00000552127 MYT1Q01538 1121 aa23.05■■□□□ 1.28
BRF1-220ENST00000552127 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
BRF1-220ENST00000552127 VGFO15240 615 aaPredicted RBP23.03■■□□□ 1.28
BRF1-220ENST00000552127 HAP1P54257 671 aaPredicted RBP23.03■■□□□ 1.28
BRF1-220ENST00000552127 PPLO60437 1756 aa23.03■■□□□ 1.28
BRF1-220ENST00000552127 CABLES1Q8TDN4 633 aa23.01■■□□□ 1.27
BRF1-220ENST00000552127 CCDC144AA2RUR9 1427 aa23■■□□□ 1.27
BRF1-220ENST00000552127 FAM98CQ17RN3 349 aaKnown RBP23■■□□□ 1.27
BRF1-220ENST00000552127 TNS1Q9HBL0 1735 aaKnown RBP22.99■■□□□ 1.27
BRF1-220ENST00000552127 PLEKHG5O94827 1062 aa22.99■■□□□ 1.27
BRF1-220ENST00000552127 FAM182BQ5T319 152 aa22.99■■□□□ 1.27
BRF1-220ENST00000552127 KRT28Q7Z3Y7 464 aa22.99■■□□□ 1.27
BRF1-220ENST00000552127 KIF1AQ12756 1690 aa22.99■■□□□ 1.27
BRF1-220ENST00000552127 DISP2A7MBM2 1401 aa22.99■■□□□ 1.27
BRF1-220ENST00000552127 EZH2Q15910 746 aaKnown RBP22.98■■□□□ 1.27
BRF1-220ENST00000552127 ABCA3Q99758 1704 aa22.97■■□□□ 1.27
BRF1-220ENST00000552127 IFT172Q9UG01 1749 aa22.96■■□□□ 1.27
BRF1-220ENST00000552127 TNS3Q68CZ2 1445 aa22.96■■□□□ 1.27
BRF1-220ENST00000552127 FAM83GA6ND36 823 aa22.95■■□□□ 1.26
BRF1-220ENST00000552127 NRAPQ86VF7 1730 aa22.95■■□□□ 1.26
BRF1-220ENST00000552127 FMN2Q9NZ56 1722 aa22.94■■□□□ 1.26
BRF1-220ENST00000552127 WAPLQ7Z5K2 1190 aa22.94■■□□□ 1.26
BRF1-220ENST00000552127 ACIN1Q9UKV3 1341 aaKnown RBP22.93■■□□□ 1.26
BRF1-220ENST00000552127 CAMKK2Q96RR4 588 aa22.91■■□□□ 1.26
BRF1-220ENST00000552127 MPHOSPH9Q99550 1183 aa22.91■■□□□ 1.26
BRF1-220ENST00000552127 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
BRF1-220ENST00000552127 RAB3GAP2Q9H2M9 1393 aa22.89■■□□□ 1.26
BRF1-220ENST00000552127 RGPD8O14715 1765 aaPredicted RBP22.89■■□□□ 1.26
BRF1-220ENST00000552127 PSME1Q06323 249 aa22.89■■□□□ 1.25
BRF1-220ENST00000552127 ADGRB2O60241 1585 aa22.89■■□□□ 1.25
BRF1-220ENST00000552127 LMOD2Q6P5Q4 547 aa22.88■■□□□ 1.25
BRF1-220ENST00000552127 BTG4Q9NY30 223 aa22.88■■□□□ 1.25
BRF1-220ENST00000552127 STK26Q9P289 416 aa22.88■■□□□ 1.25
BRF1-220ENST00000552127 TECPR2O15040 1411 aa22.88■■□□□ 1.25
BRF1-220ENST00000552127 PLEKHH1Q9ULM0 1364 aa22.88■■□□□ 1.25
BRF1-220ENST00000552127 DCAF8L1A6NGE4 600 aa22.86■■□□□ 1.25
BRF1-220ENST00000552127 THSD7AQ9UPZ6 1657 aa22.86■■□□□ 1.25
BRF1-220ENST00000552127 SBNO1A3KN83 1393 aa22.86■■□□□ 1.25
BRF1-220ENST00000552127 SPATA31E1Q6ZUB1 1445 aa22.85■■□□□ 1.25
BRF1-220ENST00000552127 PHF8Q9UPP1 1060 aa22.85■■□□□ 1.25
BRF1-220ENST00000552127 ARHGEF10O15013 1369 aa22.85■■□□□ 1.25
BRF1-220ENST00000552127 TRIM37O94972 964 aa22.84■■□□□ 1.25
BRF1-220ENST00000552127 PPP1R1BQ9UD71 204 aaPredicted RBP22.83■■□□□ 1.25
BRF1-220ENST00000552127 PARD3Q8TEW0 1356 aa22.83■■□□□ 1.25
BRF1-220ENST00000552127 RREB1Q92766 1687 aa22.83■■□□□ 1.24
BRF1-220ENST00000552127 SPATA31A5Q5VU36 1347 aa22.82■■□□□ 1.24
BRF1-220ENST00000552127 SPATA31A7Q8IWB4 1347 aa22.82■■□□□ 1.24
BRF1-220ENST00000552127 KNDC1Q76NI1 1749 aa22.82■■□□□ 1.24
BRF1-220ENST00000552127 COL14A1Q05707 1796 aaKnown RBP22.82■■□□□ 1.24
BRF1-220ENST00000552127 NUP188Q5SRE5 1749 aa22.82■■□□□ 1.24
BRF1-220ENST00000552127 CAMTA1Q9Y6Y1 1673 aa22.81■■□□□ 1.24
BRF1-220ENST00000552127 APBA3O96018 575 aa22.81■■□□□ 1.24
BRF1-220ENST00000552127 IFFO2Q5TF58 517 aa22.81■■□□□ 1.24
BRF1-220ENST00000552127 NRXN1Q9ULB1 1477 aa22.8■■□□□ 1.24
BRF1-220ENST00000552127 NINLQ9Y2I6 1382 aa22.8■■□□□ 1.24
BRF1-220ENST00000552127 ABCC11Q96J66 1382 aa22.79■■□□□ 1.24
BRF1-220ENST00000552127 FAM196AQ6ZSG2 479 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms