RNA–Protein interactions for RNA: ENST00000551552.1

AC004217.3-201, humanhuman

BASIC

Gene AC004217.3, Length 878 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004217.3-201ENST00000551552 KCNV2Q8TDN2 545 aa9.49□□□□□ -0.89
AC004217.3-201ENST00000551552 TRIM47Q96LD4 638 aa9.49□□□□□ -0.89
AC004217.3-201ENST00000551552 DDX11L8A8MPP1 907 aa9.48□□□□□ -0.89
AC004217.3-201ENST00000551552 WNT7AO00755 349 aa9.48□□□□□ -0.89
AC004217.3-201ENST00000551552 J3QL48 77 aa9.47□□□□□ -0.89
AC004217.3-201ENST00000551552 FECHP22830 423 aa9.47□□□□□ -0.89
AC004217.3-201ENST00000551552 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
AC004217.3-201ENST00000551552 DAXXQ9UER7 740 aaPredicted RBP9.46□□□□□ -0.9
AC004217.3-201ENST00000551552 MRGPRX2Q96LB1 330 aa9.45□□□□□ -0.9
AC004217.3-201ENST00000551552 FAM181BA6NEQ2 426 aa9.44□□□□□ -0.9
AC004217.3-201ENST00000551552 TRIM32Q13049 653 aa9.44□□□□□ -0.9
AC004217.3-201ENST00000551552 BRICD5Q6PL45 260 aa9.44□□□□□ -0.9
AC004217.3-201ENST00000551552 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
AC004217.3-201ENST00000551552 HPS1Q92902 700 aa9.43□□□□□ -0.9
AC004217.3-201ENST00000551552 KIFC2Q96AC6 838 aa9.43□□□□□ -0.9
AC004217.3-201ENST00000551552 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
AC004217.3-201ENST00000551552 GCGRP47871 477 aa9.42□□□□□ -0.9
AC004217.3-201ENST00000551552 HIC1Q14526 733 aa9.42□□□□□ -0.9
AC004217.3-201ENST00000551552 MSS51Q4VC12 460 aa9.42□□□□□ -0.9
AC004217.3-201ENST00000551552 SLC16A10Q8TF71 515 aa9.42□□□□□ -0.9
AC004217.3-201ENST00000551552 NLRP7Q8WX94 980 aa9.42□□□□□ -0.9
AC004217.3-201ENST00000551552 SEMA3EO15041 775 aa9.39□□□□□ -0.91
AC004217.3-201ENST00000551552 SULF1Q8IWU6 871 aa9.39□□□□□ -0.91
AC004217.3-201ENST00000551552 REPIN1Q9BWE0 567 aaKnown RBP9.39□□□□□ -0.91
AC004217.3-201ENST00000551552 GRIPAP1Q4V328 841 aa9.38□□□□□ -0.91
AC004217.3-201ENST00000551552 GMPRP36959 345 aa9.36□□□□□ -0.91
AC004217.3-201ENST00000551552 CCDC24Q8N4L8 307 aa9.36□□□□□ -0.91
AC004217.3-201ENST00000551552 ZSCAN1Q8NBB4 408 aa9.36□□□□□ -0.91
AC004217.3-201ENST00000551552 NXF1Q9UBU9 619 aaKnown RBP9.36□□□□□ -0.91
AC004217.3-201ENST00000551552 GNPATO15228 680 aa9.35□□□□□ -0.91
AC004217.3-201ENST00000551552 RC3H1Q5TC82 1133 aaKnown RBP9.35□□□□□ -0.91
AC004217.3-201ENST00000551552 MMP16P51512 607 aa9.34□□□□□ -0.91
AC004217.3-201ENST00000551552 Q3C1V9 767 aa9.34□□□□□ -0.91
AC004217.3-201ENST00000551552 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
AC004217.3-201ENST00000551552 ALDH1A1P00352 501 aa9.33□□□□□ -0.92
AC004217.3-201ENST00000551552 VEGFBP49765 207 aa9.33□□□□□ -0.92
AC004217.3-201ENST00000551552 RBM26Q5T8P6 1007 aaKnown RBP9.33□□□□□ -0.92
AC004217.3-201ENST00000551552 IRF7Q92985 503 aa9.33□□□□□ -0.92
AC004217.3-201ENST00000551552 LOC100996750A0A140TA64 210 aa9.32□□□□□ -0.92
AC004217.3-201ENST00000551552 KRTAP4-6Q9BYQ5 205 aa9.32□□□□□ -0.92
AC004217.3-201ENST00000551552 SKOR1P84550 965 aa9.31□□□□□ -0.92
AC004217.3-201ENST00000551552 BMP1P13497 986 aa9.3□□□□□ -0.92
AC004217.3-201ENST00000551552 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
AC004217.3-201ENST00000551552 USB1Q9BQ65 265 aaKnown RBP9.3□□□□□ -0.92
AC004217.3-201ENST00000551552 DXOO77932 396 aaKnown RBP9.29□□□□□ -0.92
AC004217.3-201ENST00000551552 LORP23490 312 aaPredicted RBP9.29□□□□□ -0.92
AC004217.3-201ENST00000551552 WNT7BP56706 349 aa9.28□□□□□ -0.92
AC004217.3-201ENST00000551552 NPAS3Q8IXF0 933 aa9.27□□□□□ -0.93
AC004217.3-201ENST00000551552 CAPN5O15484 640 aaPredicted RBP9.26□□□□□ -0.93
AC004217.3-201ENST00000551552 TRIM46Q7Z4K8 759 aa9.26□□□□□ -0.93
AC004217.3-201ENST00000551552 WASF2Q9Y6W5 498 aa9.25□□□□□ -0.93
AC004217.3-201ENST00000551552 H3BM21 787 aa9.24□□□□□ -0.93
AC004217.3-201ENST00000551552 SMYD5Q6GMV2 418 aa9.24□□□□□ -0.93
AC004217.3-201ENST00000551552 ERBB4Q15303 1308 aa9.24□□□□□ -0.93
AC004217.3-201ENST00000551552 GPR37O15354 613 aa9.23□□□□□ -0.93
AC004217.3-201ENST00000551552 EHBP1Q8NDI1 1231 aa9.23□□□□□ -0.93
AC004217.3-201ENST00000551552 KDM4AO75164 1064 aa9.22□□□□□ -0.93
AC004217.3-201ENST00000551552 HLA-CQ95604 372 aa9.22□□□□□ -0.93
AC004217.3-201ENST00000551552 CD46P15529 392 aa9.21□□□□□ -0.94
AC004217.3-201ENST00000551552 TESPA1A2RU30 521 aaPredicted RBP9.2□□□□□ -0.94
AC004217.3-201ENST00000551552 SIAH2O43255 324 aa9.2□□□□□ -0.94
AC004217.3-201ENST00000551552 SUZ12Q15022 739 aaKnown RBP9.2□□□□□ -0.94
AC004217.3-201ENST00000551552 ZFP42Q96MM3 310 aa9.19□□□□□ -0.94
AC004217.3-201ENST00000551552 JUNDP17535 347 aa9.17□□□□□ -0.94
AC004217.3-201ENST00000551552 PTCRAQ6ISU1 281 aaPredicted RBP9.16□□□□□ -0.94
AC004217.3-201ENST00000551552 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
AC004217.3-201ENST00000551552 NUDT12Q9BQG2 462 aa9.16□□□□□ -0.94
AC004217.3-201ENST00000551552 USP46P62068 366 aa9.15□□□□□ -0.94
AC004217.3-201ENST00000551552 GUCA2AQ02747 115 aa9.15□□□□□ -0.94
AC004217.3-201ENST00000551552 HOXA2O43364 376 aa9.14□□□□□ -0.95
AC004217.3-201ENST00000551552 GPIHBP1Q8IV16 184 aa9.13□□□□□ -0.95
AC004217.3-201ENST00000551552 SOBPA7XYQ1 873 aa9.12□□□□□ -0.95
AC004217.3-201ENST00000551552 SH3BP2P78314 561 aa9.12□□□□□ -0.95
AC004217.3-201ENST00000551552 SCARF1Q14162 830 aa9.12□□□□□ -0.95
AC004217.3-201ENST00000551552 KCTD17Q8N5Z5 321 aa9.12□□□□□ -0.95
AC004217.3-201ENST00000551552 PURBQ96QR8 312 aaKnown RBP9.11□□□□□ -0.95
AC004217.3-201ENST00000551552 TLL2Q9Y6L7 1015 aa9.11□□□□□ -0.95
AC004217.3-201ENST00000551552 MDM2Q00987 491 aaPredicted RBP9.1□□□□□ -0.95
AC004217.3-201ENST00000551552 MRPL14Q6P1L8 145 aaKnown RBP9.1□□□□□ -0.95
AC004217.3-201ENST00000551552 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
AC004217.3-201ENST00000551552 NNTQ13423 1086 aa9.08□□□□□ -0.96
AC004217.3-201ENST00000551552 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
AC004217.3-201ENST00000551552 KCNMA1Q12791 1236 aa9.07□□□□□ -0.96
AC004217.3-201ENST00000551552 PLEKHG3A1L390 1219 aa9.06□□□□□ -0.96
AC004217.3-201ENST00000551552 CCNYL3P0C7X3 344 aa9.06□□□□□ -0.96
AC004217.3-201ENST00000551552 VSIG8P0DPA2 414 aa9.06□□□□□ -0.96
AC004217.3-201ENST00000551552 MS4A1P11836 297 aa9.06□□□□□ -0.96
AC004217.3-201ENST00000551552 WDR4P57081 412 aaKnown RBP9.06□□□□□ -0.96
AC004217.3-201ENST00000551552 BAP1Q92560 729 aa9.06□□□□□ -0.96
AC004217.3-201ENST00000551552 UNC93B1Q9H1C4 597 aa9.05□□□□□ -0.96
AC004217.3-201ENST00000551552 C6orf229H3BNL8 230 aa9.04□□□□□ -0.96
AC004217.3-201ENST00000551552 MAP2K5Q13163 448 aa9.04□□□□□ -0.96
AC004217.3-201ENST00000551552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
AC004217.3-201ENST00000551552 NUTM1Q86Y26 1132 aa9.04□□□□□ -0.96
AC004217.3-201ENST00000551552 ADH1CP00326 375 aa9.03□□□□□ -0.96
AC004217.3-201ENST00000551552 TIMP2P16035 220 aa9.03□□□□□ -0.96
AC004217.3-201ENST00000551552 TULP1O00294 542 aaPredicted RBP9.02□□□□□ -0.97
AC004217.3-201ENST00000551552 MAN1A2O60476 641 aa9.02□□□□□ -0.97
AC004217.3-201ENST00000551552 VARSP26640 1264 aaKnown RBP9.02□□□□□ -0.97
AC004217.3-201ENST00000551552 GSK3AP49840 483 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms