RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 SLAIN2Q9P270 581 aa21.64■■□□□ 1.05
SMARCD1-211ENST00000551497 TRPM1Q7Z4N2 1603 aa21.64■■□□□ 1.05
SMARCD1-211ENST00000551497 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
SMARCD1-211ENST00000551497 ROCK2O75116 1388 aaKnown RBP21.63■■□□□ 1.05
SMARCD1-211ENST00000551497 ILDR2Q71H61 639 aa21.63■■□□□ 1.05
SMARCD1-211ENST00000551497 CADPS2Q86UW7 1296 aa21.63■■□□□ 1.05
SMARCD1-211ENST00000551497 DLC1Q96QB1 1528 aa21.62■■□□□ 1.05
SMARCD1-211ENST00000551497 NALCNQ8IZF0 1738 aa21.6■■□□□ 1.05
SMARCD1-211ENST00000551497 HIRIP3Q9BW71 556 aaPredicted RBP21.59■■□□□ 1.05
SMARCD1-211ENST00000551497 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
SMARCD1-211ENST00000551497 MINK1Q8N4C8 1332 aaPredicted RBP21.58■■□□□ 1.05
SMARCD1-211ENST00000551497 NUTM2FA1L443 756 aa21.57■■□□□ 1.04
SMARCD1-211ENST00000551497 GPRASP1Q5JY77 1395 aa21.57■■□□□ 1.04
SMARCD1-211ENST00000551497 RALGAPBQ86X10 1494 aa21.56■■□□□ 1.04
SMARCD1-211ENST00000551497 DCCP43146 1447 aa21.55■■□□□ 1.04
SMARCD1-211ENST00000551497 ARHGEF28Q8N1W1 1705 aaKnown RBP21.55■■□□□ 1.04
SMARCD1-211ENST00000551497 SOCS7O14512 581 aa21.54■■□□□ 1.04
SMARCD1-211ENST00000551497 MST1RQ04912 1400 aa21.54■■□□□ 1.04
SMARCD1-211ENST00000551497 CENPJQ9HC77 1338 aaPredicted RBP21.53■■□□□ 1.04
SMARCD1-211ENST00000551497 HSPA1LP34931 641 aa21.51■■□□□ 1.03
SMARCD1-211ENST00000551497 ORAI2Q96SN7 254 aa21.51■■□□□ 1.03
SMARCD1-211ENST00000551497 BRINP3Q76B58 766 aa21.5■■□□□ 1.03
SMARCD1-211ENST00000551497 C1orf167Q5SNV9 1468 aa21.5■■□□□ 1.03
SMARCD1-211ENST00000551497 WASLO00401 505 aaPredicted RBP21.49■■□□□ 1.03
SMARCD1-211ENST00000551497 CDK19Q9BWU1 502 aa21.48■■□□□ 1.03
SMARCD1-211ENST00000551497 CDC42BPGQ6DT37 1551 aa21.48■■□□□ 1.03
SMARCD1-211ENST00000551497 ROBO1Q9Y6N7 1651 aa21.47■■□□□ 1.03
SMARCD1-211ENST00000551497 ESCO1Q5FWF5 840 aa21.47■■□□□ 1.03
SMARCD1-211ENST00000551497 DDX17Q92841 729 aaKnown RBP21.46■■□□□ 1.03
SMARCD1-211ENST00000551497 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
SMARCD1-211ENST00000551497 PRR36Q9H6K5 1346 aa21.44■■□□□ 1.02
SMARCD1-211ENST00000551497 EIF3AQ14152 1382 aaKnown RBP21.44■■□□□ 1.02
SMARCD1-211ENST00000551497 FMN2Q9NZ56 1722 aa21.43■■□□□ 1.02
SMARCD1-211ENST00000551497 RGPD8O14715 1765 aaPredicted RBP21.42■■□□□ 1.02
SMARCD1-211ENST00000551497 ADGRB2O60241 1585 aa21.42■■□□□ 1.02
SMARCD1-211ENST00000551497 QRICH2Q9H0J4 1663 aa21.42■■□□□ 1.02
SMARCD1-211ENST00000551497 NUDT16Q96DE0 195 aaKnown RBP21.41■■□□□ 1.02
SMARCD1-211ENST00000551497 CABP2Q9NPB3 220 aa21.41■■□□□ 1.02
SMARCD1-211ENST00000551497 SRPK2P78362 688 aaKnown RBP21.4■■□□□ 1.02
SMARCD1-211ENST00000551497 USP47Q96K76 1375 aa21.39■■□□□ 1.02
SMARCD1-211ENST00000551497 FOXO3O43524 673 aa21.39■■□□□ 1.01
SMARCD1-211ENST00000551497 PMFBP1Q8TBY8 1022 aa21.38■■□□□ 1.01
SMARCD1-211ENST00000551497 TESK2Q96S53 571 aa21.38■■□□□ 1.01
SMARCD1-211ENST00000551497 PHF8Q9UPP1 1060 aa21.38■■□□□ 1.01
SMARCD1-211ENST00000551497 USP32Q8NFA0 1604 aa21.37■■□□□ 1.01
SMARCD1-211ENST00000551497 EVC2Q86UK5 1308 aa21.37■■□□□ 1.01
SMARCD1-211ENST00000551497 XPCQ01831 940 aaPredicted RBP21.36■■□□□ 1.01
SMARCD1-211ENST00000551497 ANKARQ7Z5J8 1434 aa21.36■■□□□ 1.01
SMARCD1-211ENST00000551497 TULP4Q9NRJ4 1543 aa21.35■■□□□ 1.01
SMARCD1-211ENST00000551497 CCDC61Q9Y6R9 512 aa21.34■■□□□ 1.01
SMARCD1-211ENST00000551497 PHLPP1O60346 1717 aa21.34■■□□□ 1.01
SMARCD1-211ENST00000551497 SBNO2Q9Y2G9 1366 aa21.33■■□□□ 1
SMARCD1-211ENST00000551497 HSPA5P11021 654 aaKnown RBP21.32■■□□□ 1
SMARCD1-211ENST00000551497 AHDC1Q5TGY3 1603 aaPredicted RBP21.32■■□□□ 1
SMARCD1-211ENST00000551497 ATP7BP35670 1465 aa21.32■■□□□ 1
SMARCD1-211ENST00000551497 SOS2Q07890 1332 aaPredicted RBP21.31■■□□□ 1
SMARCD1-211ENST00000551497 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
SMARCD1-211ENST00000551497 KRT28Q7Z3Y7 464 aa21.31■■□□□ 1
SMARCD1-211ENST00000551497 NPHP3Q7Z494 1330 aa21.3■■□□□ 1
SMARCD1-211ENST00000551497 PSME1Q06323 249 aa21.3■■□□□ 1
SMARCD1-211ENST00000551497 CABP1Q9NZU7 370 aa21.3■■□□□ 1
SMARCD1-211ENST00000551497 NHSL1Q5SYE7 1610 aa21.29■■□□□ 1
SMARCD1-211ENST00000551497 PLEKHG3A1L390 1219 aa21.29■■□□□ 1
SMARCD1-211ENST00000551497 NGDNQ8NEJ9 315 aaKnown RBP21.29■■□□□ 1
SMARCD1-211ENST00000551497 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
SMARCD1-211ENST00000551497 LRRC59Q96AG4 307 aaKnown RBP21.28■■□□□ 1
SMARCD1-211ENST00000551497 ACEP12821 1306 aa21.27■□□□□ 0.99
SMARCD1-211ENST00000551497 TMF1P82094 1093 aa21.25■□□□□ 0.99
SMARCD1-211ENST00000551497 PPIP5K1Q6PFW1 1433 aa21.25■□□□□ 0.99
SMARCD1-211ENST00000551497 PXDNQ92626 1479 aa21.25■□□□□ 0.99
SMARCD1-211ENST00000551497 KIF1AQ12756 1690 aa21.24■□□□□ 0.99
SMARCD1-211ENST00000551497 SLC24A1O60721 1099 aa21.24■□□□□ 0.99
SMARCD1-211ENST00000551497 SLC12A5Q9H2X9 1139 aa21.23■□□□□ 0.99
SMARCD1-211ENST00000551497 JCADQ9P266 1359 aa21.23■□□□□ 0.99
SMARCD1-211ENST00000551497 TMC1Q8TDI8 760 aa21.22■□□□□ 0.99
SMARCD1-211ENST00000551497 PUS7Q96PZ0 661 aaKnown RBP21.22■□□□□ 0.99
SMARCD1-211ENST00000551497 ATAD2Q6PL18 1390 aa21.22■□□□□ 0.99
SMARCD1-211ENST00000551497 TOPAZ1Q8N9V7 1692 aa21.21■□□□□ 0.99
SMARCD1-211ENST00000551497 ITSN1Q15811 1721 aa21.21■□□□□ 0.99
SMARCD1-211ENST00000551497 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
SMARCD1-211ENST00000551497 POLR3AO14802 1390 aaPredicted RBP21.21■□□□□ 0.99
SMARCD1-211ENST00000551497 PAK3O75914 559 aaPredicted RBP21.19■□□□□ 0.98
SMARCD1-211ENST00000551497 LMOD2Q6P5Q4 547 aa21.19■□□□□ 0.98
SMARCD1-211ENST00000551497 PNPLA6Q8IY17 1366 aa21.19■□□□□ 0.98
SMARCD1-211ENST00000551497 NUTM2BA6NNL0 878 aaPredicted RBP21.18■□□□□ 0.98
SMARCD1-211ENST00000551497 NUTM2EB1AL46 878 aaPredicted RBP21.18■□□□□ 0.98
SMARCD1-211ENST00000551497 C11orf95C9JLR9 678 aaPredicted RBP21.18■□□□□ 0.98
SMARCD1-211ENST00000551497 PLEKHG5O94827 1062 aa21.18■□□□□ 0.98
SMARCD1-211ENST00000551497 NUTM2AQ8IVF1 878 aaPredicted RBP21.18■□□□□ 0.98
SMARCD1-211ENST00000551497 MED1Q15648 1581 aaPredicted RBP21.18■□□□□ 0.98
SMARCD1-211ENST00000551497 SBNO1A3KN83 1393 aa21.17■□□□□ 0.98
SMARCD1-211ENST00000551497 CDCA8Q53HL2 280 aa21.15■□□□□ 0.98
SMARCD1-211ENST00000551497 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
SMARCD1-211ENST00000551497 ZNF692Q9BU19 519 aaPredicted RBP21.14■□□□□ 0.97
SMARCD1-211ENST00000551497 SPATA31A6Q5VVP1 1343 aa21.13■□□□□ 0.97
SMARCD1-211ENST00000551497 NUTM2GQ5VZR2 741 aa21.13■□□□□ 0.97
SMARCD1-211ENST00000551497 CABLES1Q8TDN4 633 aa21.13■□□□□ 0.97
SMARCD1-211ENST00000551497 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
SMARCD1-211ENST00000551497 TNS3Q68CZ2 1445 aa21.12■□□□□ 0.97
SMARCD1-211ENST00000551497 TRPM3Q9HCF6 1732 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms