RNA–Protein interactions for RNA: ENST00000551424.5

CNTN1-209, Transcript of contactin 1, human

TSL 3

Gene CNTN1, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN1-209	ENST00000551424	CDC42BPG	Q6DT37	1551 aa		34.09	■■■■□ 3.05
CNTN1-209	ENST00000551424	CDK12	Q9NYV4	1490 aa	Predicted RBP	34.08	■■■■□ 3.05
CNTN1-209	ENST00000551424	NGLY1	Q96IV0	654 aa		34.07	■■■■□ 3.04
CNTN1-209	ENST00000551424	ANKRD30B	Q9BXX2	1392 aa		34.07	■■■■□ 3.04
CNTN1-209	ENST00000551424	QTRT2	Q9H974	415 aa	Known RBP	34.06	■■■■□ 3.04
CNTN1-209	ENST00000551424	ESCO1	Q5FWF5	840 aa		34.05	■■■■□ 3.04
CNTN1-209	ENST00000551424	WAPL	Q7Z5K2	1190 aa		34.04	■■■■□ 3.04
CNTN1-209	ENST00000551424	TMEM132E	Q6IEE7	984 aa		34.03	■■■■□ 3.04
CNTN1-209	ENST00000551424	LRPPRC	P42704	1394 aa	Known RBP	34.02	■■■■□ 3.04
CNTN1-209	ENST00000551424	NUTM2F	A1L443	756 aa		34.02	■■■■□ 3.04
CNTN1-209	ENST00000551424	RBM6	P78332	1123 aa	Known RBP	34.01	■■■■□ 3.03
CNTN1-209	ENST00000551424	RGS12	O14924	1447 aa		34.01	■■■■□ 3.03
CNTN1-209	ENST00000551424	TECPR2	O15040	1411 aa		34	■■■■□ 3.03
CNTN1-209	ENST00000551424	KNDC1	Q76NI1	1749 aa		34	■■■■□ 3.03
CNTN1-209	ENST00000551424	NPHP3	Q7Z494	1330 aa		34	■■■■□ 3.03
CNTN1-209	ENST00000551424	PLEKHH1	Q9ULM0	1364 aa		33.98	■■■■□ 3.03
CNTN1-209	ENST00000551424	PIK3C2G	O75747	1445 aa		33.98	■■■■□ 3.03
CNTN1-209	ENST00000551424	XPC	Q01831	940 aa	Predicted RBP	33.98	■■■■□ 3.03
CNTN1-209	ENST00000551424	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.97	■■■■□ 3.03
CNTN1-209	ENST00000551424	FOXO3	O43524	673 aa		33.95	■■■■□ 3.03
CNTN1-209	ENST00000551424	ABCC11	Q96J66	1382 aa		33.95	■■■■□ 3.02
CNTN1-209	ENST00000551424	PXDN	Q92626	1479 aa		33.95	■■■■□ 3.02
CNTN1-209	ENST00000551424	USP21	Q9UK80	565 aa		33.94	■■■■□ 3.02
CNTN1-209	ENST00000551424	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.93	■■■■□ 3.02
CNTN1-209	ENST00000551424	FMN2	Q9NZ56	1722 aa		33.9	■■■■□ 3.02
CNTN1-209	ENST00000551424	MYOM2	P54296	1465 aa		33.89	■■■■□ 3.02
CNTN1-209	ENST00000551424	TRPC5	Q9UL62	973 aa	Predicted RBP	33.87	■■■■□ 3.01
CNTN1-209	ENST00000551424	ACIN1	Q9UKV3	1341 aa	Known RBP	33.85	■■■■□ 3.01
CNTN1-209	ENST00000551424	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.85	■■■■□ 3.01
CNTN1-209	ENST00000551424	MARF1	Q9Y4F3	1742 aa	Known RBP	33.84	■■■■□ 3.01
CNTN1-209	ENST00000551424	CFAP70	Q5T0N1	1121 aa		33.83	■■■■□ 3.01
CNTN1-209	ENST00000551424	C14orf93	Q9H972	538 aa	Known RBP	33.83	■■■■□ 3.01
CNTN1-209	ENST00000551424	KIF1A	Q12756	1690 aa		33.83	■■■■□ 3.01
CNTN1-209	ENST00000551424	ATRN	O75882	1429 aa		33.81	■■■■□ 3
CNTN1-209	ENST00000551424	RAB3GAP2	Q9H2M9	1393 aa		33.81	■■■■□ 3
CNTN1-209	ENST00000551424	NRXN1	Q9ULB1	1477 aa		33.81	■■■■□ 3
CNTN1-209	ENST00000551424	DHX57	Q6P158	1386 aa	Known RBP	33.8	■■■■□ 3
CNTN1-209	ENST00000551424	RGPD8	O14715	1765 aa	Predicted RBP	33.78	■■■■□ 3
CNTN1-209	ENST00000551424	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.78	■■■■□ 3
CNTN1-209	ENST00000551424	SIRT1	Q96EB6	747 aa		33.76	■■■□□ 2.99
CNTN1-209	ENST00000551424	ATAD2	Q6PL18	1390 aa		33.75	■■■□□ 2.99
CNTN1-209	ENST00000551424	SPATA31A3	Q5VYP0	1347 aa		33.75	■■■□□ 2.99
CNTN1-209	ENST00000551424	KRT28	Q7Z3Y7	464 aa		33.74	■■■□□ 2.99
CNTN1-209	ENST00000551424	PRAM1	Q96QH2	718 aa		33.74	■■■□□ 2.99
CNTN1-209	ENST00000551424	BCL9L	Q86UU0	1499 aa		33.74	■■■□□ 2.99
CNTN1-209	ENST00000551424	PHF8	Q9UPP1	1060 aa		33.72	■■■□□ 2.99
CNTN1-209	ENST00000551424	PLEKHG5	O94827	1062 aa		33.71	■■■□□ 2.99
CNTN1-209	ENST00000551424	POGK	Q9P215	609 aa		33.69	■■■□□ 2.98
CNTN1-209	ENST00000551424	HAP1	P54257	671 aa	Predicted RBP	33.67	■■■□□ 2.98
CNTN1-209	ENST00000551424	TNS3	Q68CZ2	1445 aa		33.66	■■■□□ 2.98
CNTN1-209	ENST00000551424	USP32	Q8NFA0	1604 aa		33.66	■■■□□ 2.98
CNTN1-209	ENST00000551424	DLC1	Q96QB1	1528 aa		33.65	■■■□□ 2.98
CNTN1-209	ENST00000551424	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.65	■■■□□ 2.98
CNTN1-209	ENST00000551424	PSME1	Q06323	249 aa		33.64	■■■□□ 2.98
CNTN1-209	ENST00000551424	GJD4	Q96KN9	370 aa	Predicted RBP	33.64	■■■□□ 2.98
CNTN1-209	ENST00000551424	KDM2A	Q9Y2K7	1162 aa		33.64	■■■□□ 2.98
CNTN1-209	ENST00000551424	LMOD2	Q6P5Q4	547 aa		33.63	■■■□□ 2.97
CNTN1-209	ENST00000551424	CABLES1	Q8TDN4	633 aa		33.62	■■■□□ 2.97
CNTN1-209	ENST00000551424	ADGRB1	O14514	1584 aa		33.62	■■■□□ 2.97
CNTN1-209	ENST00000551424	TRAK1	Q9UPV9	953 aa		33.61	■■■□□ 2.97
CNTN1-209	ENST00000551424	SLIT2	O94813	1529 aa		33.61	■■■□□ 2.97
CNTN1-209	ENST00000551424	UNC5CL	Q8IV45	518 aa		33.6	■■■□□ 2.97
CNTN1-209	ENST00000551424	PMFBP1	Q8TBY8	1022 aa		33.6	■■■□□ 2.97
CNTN1-209	ENST00000551424	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.59	■■■□□ 2.97
CNTN1-209	ENST00000551424	DCAF11	Q8TEB1	546 aa		33.58	■■■□□ 2.97
CNTN1-209	ENST00000551424	ADGRB2	O60241	1585 aa		33.58	■■■□□ 2.97
CNTN1-209	ENST00000551424	RALGAPB	Q86X10	1494 aa		33.57	■■■□□ 2.97
CNTN1-209	ENST00000551424	GLI3	P10071	1580 aa		33.57	■■■□□ 2.96
CNTN1-209	ENST00000551424	ANKAR	Q7Z5J8	1434 aa		33.57	■■■□□ 2.96
CNTN1-209	ENST00000551424	SBNO1	A3KN83	1393 aa		33.57	■■■□□ 2.96
CNTN1-209	ENST00000551424	ABCA3	Q99758	1704 aa		33.56	■■■□□ 2.96
CNTN1-209	ENST00000551424	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.56	■■■□□ 2.96
CNTN1-209	ENST00000551424	PLCH1	Q4KWH8	1693 aa		33.54	■■■□□ 2.96
CNTN1-209	ENST00000551424	ARHGEF10	O15013	1369 aa		33.53	■■■□□ 2.96
CNTN1-209	ENST00000551424	CCDC9	Q9Y3X0	531 aa	Known RBP	33.49	■■■□□ 2.95
CNTN1-209	ENST00000551424	NWD2	Q9ULI1	1742 aa		33.48	■■■□□ 2.95
CNTN1-209	ENST00000551424	PRR36	Q9H6K5	1346 aa		33.47	■■■□□ 2.95
CNTN1-209	ENST00000551424	EIF3A	Q14152	1382 aa	Known RBP	33.47	■■■□□ 2.95
CNTN1-209	ENST00000551424	BRWD3	Q6RI45	1802 aa		33.46	■■■□□ 2.95
CNTN1-209	ENST00000551424	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.46	■■■□□ 2.95
CNTN1-209	ENST00000551424	TULP4	Q9NRJ4	1543 aa		33.46	■■■□□ 2.95
CNTN1-209	ENST00000551424	GPRASP1	Q5JY77	1395 aa		33.45	■■■□□ 2.94
CNTN1-209	ENST00000551424	VPS72	Q15906	364 aa		33.44	■■■□□ 2.94
CNTN1-209	ENST00000551424	WASL	O00401	505 aa	Predicted RBP	33.43	■■■□□ 2.94
CNTN1-209	ENST00000551424	CCDC125	Q86Z20	511 aa		33.43	■■■□□ 2.94
CNTN1-209	ENST00000551424	SEPT12	Q8IYM1	358 aa		33.41	■■■□□ 2.94
CNTN1-209	ENST00000551424	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.41	■■■□□ 2.94
CNTN1-209	ENST00000551424	ALS2	Q96Q42	1657 aa		33.4	■■■□□ 2.94
CNTN1-209	ENST00000551424	STAC3	Q96MF2	364 aa		33.4	■■■□□ 2.94
CNTN1-209	ENST00000551424	FAM83G	A6ND36	823 aa		33.39	■■■□□ 2.94
CNTN1-209	ENST00000551424	ZRANB1	Q9UGI0	708 aa		33.39	■■■□□ 2.94
CNTN1-209	ENST00000551424	EP400	Q96L91	3159 aa		33.39	■■■□□ 2.94
CNTN1-209	ENST00000551424	HRC	P23327	699 aa		33.38	■■■□□ 2.93
CNTN1-209	ENST00000551424	NGDN	Q8NEJ9	315 aa	Known RBP	33.38	■■■□□ 2.93
CNTN1-209	ENST00000551424		A0A0G2JS52	829 aa		33.35	■■■□□ 2.93
CNTN1-209	ENST00000551424	PAK3	O75914	559 aa	Predicted RBP	33.35	■■■□□ 2.93
CNTN1-209	ENST00000551424	MYT1	Q01538	1121 aa		33.35	■■■□□ 2.93
CNTN1-209	ENST00000551424	NRAP	Q86VF7	1730 aa		33.35	■■■□□ 2.93
CNTN1-209	ENST00000551424	BLM	P54132	1417 aa	Predicted RBP	33.35	■■■□□ 2.93
CNTN1-209	ENST00000551424	ITSN1	Q15811	1721 aa		33.33	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms