RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 NWD1Q149M9 1564 aa19.48■□□□□ 0.71
LETMD1-229ENST00000551261 USP32Q8NFA0 1604 aa19.47■□□□□ 0.71
LETMD1-229ENST00000551261 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
LETMD1-229ENST00000551261 PRKRIP1Q9H875 184 aaPredicted RBP19.47■□□□□ 0.71
LETMD1-229ENST00000551261 CHD2O14647 1828 aaKnown RBP19.46■□□□□ 0.71
LETMD1-229ENST00000551261 PTPRUQ92729 1446 aa19.46■□□□□ 0.71
LETMD1-229ENST00000551261 SLC26A8Q96RN1 970 aa19.46■□□□□ 0.71
LETMD1-229ENST00000551261 ROBO2Q9HCK4 1378 aa19.45■□□□□ 0.7
LETMD1-229ENST00000551261 RALBP1Q15311 655 aa19.45■□□□□ 0.7
LETMD1-229ENST00000551261 LMTK3Q96Q04 1460 aa19.44■□□□□ 0.7
LETMD1-229ENST00000551261 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
LETMD1-229ENST00000551261 ATP7BP35670 1465 aa19.43■□□□□ 0.7
LETMD1-229ENST00000551261 PER1O15534 1290 aaPredicted RBP19.43■□□□□ 0.7
LETMD1-229ENST00000551261 PANK3Q9H999 370 aa19.43■□□□□ 0.7
LETMD1-229ENST00000551261 AMOTL2Q9Y2J4 779 aa19.43■□□□□ 0.7
LETMD1-229ENST00000551261 MINK1Q8N4C8 1332 aaPredicted RBP19.43■□□□□ 0.7
LETMD1-229ENST00000551261 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
LETMD1-229ENST00000551261 SRPK2P78362 688 aaKnown RBP19.42■□□□□ 0.7
LETMD1-229ENST00000551261 KNSTRNQ9Y448 316 aa19.42■□□□□ 0.7
LETMD1-229ENST00000551261 PLEKHH1Q9ULM0 1364 aa19.42■□□□□ 0.7
LETMD1-229ENST00000551261 PARD3Q8TEW0 1356 aa19.41■□□□□ 0.7
LETMD1-229ENST00000551261 WASLO00401 505 aaPredicted RBP19.4■□□□□ 0.7
LETMD1-229ENST00000551261 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
LETMD1-229ENST00000551261 NSD2O96028 1365 aa19.4■□□□□ 0.7
LETMD1-229ENST00000551261 SAFB2Q14151 953 aaKnown RBP eCLIP19.39■□□□□ 0.69
LETMD1-229ENST00000551261 CDC42BPGQ6DT37 1551 aa19.39■□□□□ 0.69
LETMD1-229ENST00000551261 WAPLQ7Z5K2 1190 aa19.38■□□□□ 0.69
LETMD1-229ENST00000551261 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.38■□□□□ 0.69
LETMD1-229ENST00000551261 ITSN1Q15811 1721 aa19.37■□□□□ 0.69
LETMD1-229ENST00000551261 MYBBP1AQ9BQG0 1328 aaKnown RBP19.37■□□□□ 0.69
LETMD1-229ENST00000551261 CDK19Q9BWU1 502 aa19.37■□□□□ 0.69
LETMD1-229ENST00000551261 TERF2IPQ9NYB0 399 aa19.37■□□□□ 0.69
LETMD1-229ENST00000551261 TOPAZ1Q8N9V7 1692 aa19.36■□□□□ 0.69
LETMD1-229ENST00000551261 ANKARQ7Z5J8 1434 aa19.36■□□□□ 0.69
LETMD1-229ENST00000551261 KCNA6P17658 529 aa19.35■□□□□ 0.69
LETMD1-229ENST00000551261 CABP2Q9NPB3 220 aa19.35■□□□□ 0.69
LETMD1-229ENST00000551261 NCOA3Q9Y6Q9 1424 aa19.34■□□□□ 0.69
LETMD1-229ENST00000551261 BRD4O60885 1362 aaPredicted RBP19.34■□□□□ 0.69
LETMD1-229ENST00000551261 TMC1Q8TDI8 760 aa19.34■□□□□ 0.69
LETMD1-229ENST00000551261 NSD3Q9BZ95 1437 aa19.34■□□□□ 0.69
LETMD1-229ENST00000551261 NCKAP5LQ9HCH0 1330 aa19.33■□□□□ 0.69
LETMD1-229ENST00000551261 AMER1Q5JTC6 1135 aaPredicted RBP19.33■□□□□ 0.68
LETMD1-229ENST00000551261 HDGFL2Q7Z4V5 671 aaPredicted RBP19.33■□□□□ 0.68
LETMD1-229ENST00000551261 ADGRL3Q9HAR2 1447 aa19.33■□□□□ 0.68
LETMD1-229ENST00000551261 CGNL1Q0VF96 1302 aa19.32■□□□□ 0.68
LETMD1-229ENST00000551261 NLRP13Q86W25 1043 aa19.31■□□□□ 0.68
LETMD1-229ENST00000551261 CCDC61Q9Y6R9 512 aa19.31■□□□□ 0.68
LETMD1-229ENST00000551261 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
LETMD1-229ENST00000551261 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
LETMD1-229ENST00000551261 A0A1W2PP64 1363 aa19.31■□□□□ 0.68
LETMD1-229ENST00000551261 CD163L1Q9NR16 1453 aa19.3■□□□□ 0.68
LETMD1-229ENST00000551261 SLC12A5Q9H2X9 1139 aa19.3■□□□□ 0.68
LETMD1-229ENST00000551261 NALCNQ8IZF0 1738 aa19.3■□□□□ 0.68
LETMD1-229ENST00000551261 CPSF1Q10570 1443 aaKnown RBP19.29■□□□□ 0.68
LETMD1-229ENST00000551261 MON2Q7Z3U7 1717 aa19.28■□□□□ 0.68
LETMD1-229ENST00000551261 ANKRD26Q9UPS8 1709 aa19.28■□□□□ 0.68
LETMD1-229ENST00000551261 EDC4Q6P2E9 1401 aaKnown RBP19.27■□□□□ 0.68
LETMD1-229ENST00000551261 AKAP12Q02952 1782 aa19.27■□□□□ 0.68
LETMD1-229ENST00000551261 STRCQ7RTU9 1775 aa19.27■□□□□ 0.68
LETMD1-229ENST00000551261 NUDT16Q96DE0 195 aaKnown RBP19.27■□□□□ 0.68
LETMD1-229ENST00000551261 DCCP43146 1447 aa19.26■□□□□ 0.67
LETMD1-229ENST00000551261 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
LETMD1-229ENST00000551261 CARD14Q9BXL6 1004 aa19.26■□□□□ 0.67
LETMD1-229ENST00000551261 MRS2Q9HD23 443 aa19.25■□□□□ 0.67
LETMD1-229ENST00000551261 KIF20BQ96Q89 1820 aa19.25■□□□□ 0.67
LETMD1-229ENST00000551261 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
LETMD1-229ENST00000551261 INSRP06213 1382 aa19.23■□□□□ 0.67
LETMD1-229ENST00000551261 PLEKHG3A1L390 1219 aa19.23■□□□□ 0.67
LETMD1-229ENST00000551261 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
LETMD1-229ENST00000551261 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
LETMD1-229ENST00000551261 CABP1Q9NZU7 370 aa19.23■□□□□ 0.67
LETMD1-229ENST00000551261 NRKQ7Z2Y5 1582 aa19.22■□□□□ 0.67
LETMD1-229ENST00000551261 HSPA2P54652 639 aa19.21■□□□□ 0.67
LETMD1-229ENST00000551261 PRR36Q9H6K5 1346 aa19.21■□□□□ 0.67
LETMD1-229ENST00000551261 POLR3AO14802 1390 aaPredicted RBP19.2■□□□□ 0.66
LETMD1-229ENST00000551261 USP6P35125 1406 aa19.17■□□□□ 0.66
LETMD1-229ENST00000551261 MORC1Q86VD1 984 aa19.17■□□□□ 0.66
LETMD1-229ENST00000551261 SCAF1Q9H7N4 1312 aaKnown RBP19.17■□□□□ 0.66
LETMD1-229ENST00000551261 KIF1AQ12756 1690 aa19.17■□□□□ 0.66
LETMD1-229ENST00000551261 PPP2R1AP30153 589 aa19.16■□□□□ 0.66
LETMD1-229ENST00000551261 PROSER2Q86WR7 435 aaPredicted RBP19.16■□□□□ 0.66
LETMD1-229ENST00000551261 STRCP1A6NGW2 1772 aa19.15■□□□□ 0.66
LETMD1-229ENST00000551261 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
LETMD1-229ENST00000551261 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
LETMD1-229ENST00000551261 LRRC7Q96NW7 1537 aa19.15■□□□□ 0.66
LETMD1-229ENST00000551261 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
LETMD1-229ENST00000551261 TMEM94Q12767 1356 aa19.13■□□□□ 0.65
LETMD1-229ENST00000551261 ACEP12821 1306 aa19.12■□□□□ 0.65
LETMD1-229ENST00000551261 USP54Q70EL1 1684 aa19.11■□□□□ 0.65
LETMD1-229ENST00000551261 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
LETMD1-229ENST00000551261 FYB1O15117 783 aa19.11■□□□□ 0.65
LETMD1-229ENST00000551261 PNISRQ8TF01 805 aaKnown RBP19.11■□□□□ 0.65
LETMD1-229ENST00000551261 YTHDC1Q96MU7 727 aaKnown RBP19.11■□□□□ 0.65
LETMD1-229ENST00000551261 MSH6P52701 1360 aa19.1■□□□□ 0.65
LETMD1-229ENST00000551261 CNGB1Q14028 1251 aaPredicted RBP19.1■□□□□ 0.65
LETMD1-229ENST00000551261 RGPD8O14715 1765 aaPredicted RBP19.1■□□□□ 0.65
LETMD1-229ENST00000551261 AATKQ6ZMQ8 1374 aa19.08■□□□□ 0.65
LETMD1-229ENST00000551261 CCDC184Q52MB2 194 aa19.08■□□□□ 0.64
LETMD1-229ENST00000551261 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.64
LETMD1-229ENST00000551261 NGDNQ8NEJ9 315 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 272.6 ms