RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 LAMC1P11047 1609 aa11.09□□□□□ -0.63
ERBB3-218ENST00000551176 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
ERBB3-218ENST00000551176 STAC3Q96MF2 364 aa11.09□□□□□ -0.63
ERBB3-218ENST00000551176 PRAM1Q96QH2 718 aa11.09□□□□□ -0.63
ERBB3-218ENST00000551176 KNDC1Q76NI1 1749 aa11.09□□□□□ -0.63
ERBB3-218ENST00000551176 CDC42BPGQ6DT37 1551 aa11.08□□□□□ -0.64
ERBB3-218ENST00000551176 L3MBTL2Q969R5 705 aa11.08□□□□□ -0.64
ERBB3-218ENST00000551176 TRAK1Q9UPV9 953 aa11.08□□□□□ -0.64
ERBB3-218ENST00000551176 PHLPP1O60346 1717 aa11.08□□□□□ -0.64
ERBB3-218ENST00000551176 JCADQ9P266 1359 aa11.07□□□□□ -0.64
ERBB3-218ENST00000551176 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
ERBB3-218ENST00000551176 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
ERBB3-218ENST00000551176 SAFB2Q14151 953 aaKnown RBP eCLIP11.07□□□□□ -0.64
ERBB3-218ENST00000551176 DLC1Q96QB1 1528 aa11.07□□□□□ -0.64
ERBB3-218ENST00000551176 NBPF1Q3BBV0 1214 aa11.06□□□□□ -0.64
ERBB3-218ENST00000551176 PIAS4Q8N2W9 510 aaPredicted RBP11.06□□□□□ -0.64
ERBB3-218ENST00000551176 RGS17Q9UGC6 210 aaPredicted RBP11.06□□□□□ -0.64
ERBB3-218ENST00000551176 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
ERBB3-218ENST00000551176 POGKQ9P215 609 aa11.04□□□□□ -0.64
ERBB3-218ENST00000551176 LRP6O75581 1613 aa11.04□□□□□ -0.64
ERBB3-218ENST00000551176 NHSL1Q5SYE7 1610 aa11.04□□□□□ -0.64
ERBB3-218ENST00000551176 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
ERBB3-218ENST00000551176 SOS2Q07890 1332 aaPredicted RBP11.03□□□□□ -0.64
ERBB3-218ENST00000551176 MINK1Q8N4C8 1332 aaPredicted RBP11.02□□□□□ -0.65
ERBB3-218ENST00000551176 PNPLA6Q8IY17 1366 aa11.02□□□□□ -0.65
ERBB3-218ENST00000551176 FMN2Q9NZ56 1722 aa11.01□□□□□ -0.65
ERBB3-218ENST00000551176 PXDNQ92626 1479 aa11.01□□□□□ -0.65
ERBB3-218ENST00000551176 FOXO3O43524 673 aa11.01□□□□□ -0.65
ERBB3-218ENST00000551176 XPCQ01831 940 aaPredicted RBP11.01□□□□□ -0.65
ERBB3-218ENST00000551176 LRRC59Q96AG4 307 aaKnown RBP11.01□□□□□ -0.65
ERBB3-218ENST00000551176 SPATA31A6Q5VVP1 1343 aa11.01□□□□□ -0.65
ERBB3-218ENST00000551176 ADGRB2O60241 1585 aa11□□□□□ -0.65
ERBB3-218ENST00000551176 NBPF8Q3BBV2 869 aa11□□□□□ -0.65
ERBB3-218ENST00000551176 PRR36Q9H6K5 1346 aa11□□□□□ -0.65
ERBB3-218ENST00000551176 SHPRHQ149N8 1683 aa10.99□□□□□ -0.65
ERBB3-218ENST00000551176 NUTM2BA6NNL0 878 aaPredicted RBP10.99□□□□□ -0.65
ERBB3-218ENST00000551176 NUTM2EB1AL46 878 aaPredicted RBP10.99□□□□□ -0.65
ERBB3-218ENST00000551176 NUTM2AQ8IVF1 878 aaPredicted RBP10.99□□□□□ -0.65
ERBB3-218ENST00000551176 NPHP3Q7Z494 1330 aa10.99□□□□□ -0.65
ERBB3-218ENST00000551176 USP32Q8NFA0 1604 aa10.98□□□□□ -0.65
ERBB3-218ENST00000551176 ARHGEF28Q8N1W1 1705 aaKnown RBP10.98□□□□□ -0.65
ERBB3-218ENST00000551176 KIAA1210Q9ULL0 1709 aa10.98□□□□□ -0.65
ERBB3-218ENST00000551176 WASLO00401 505 aaPredicted RBP10.98□□□□□ -0.65
ERBB3-218ENST00000551176 POTEAQ6S8J7 498 aa10.98□□□□□ -0.65
ERBB3-218ENST00000551176 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
ERBB3-218ENST00000551176 ANKARQ7Z5J8 1434 aa10.98□□□□□ -0.65
ERBB3-218ENST00000551176 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
ERBB3-218ENST00000551176 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
ERBB3-218ENST00000551176 PMFBP1Q8TBY8 1022 aa10.96□□□□□ -0.65
ERBB3-218ENST00000551176 TRPM1Q7Z4N2 1603 aa10.95□□□□□ -0.66
ERBB3-218ENST00000551176 TULP4Q9NRJ4 1543 aa10.95□□□□□ -0.66
ERBB3-218ENST00000551176 SPATA31A3Q5VYP0 1347 aa10.95□□□□□ -0.66
ERBB3-218ENST00000551176 MEX3CQ5U5Q3 659 aaKnown RBP10.95□□□□□ -0.66
ERBB3-218ENST00000551176 CDK19Q9BWU1 502 aa10.95□□□□□ -0.66
ERBB3-218ENST00000551176 ATP7BP35670 1465 aa10.94□□□□□ -0.66
ERBB3-218ENST00000551176 ROCK2O75116 1388 aaKnown RBP10.94□□□□□ -0.66
ERBB3-218ENST00000551176 TONSLQ96HA7 1378 aa10.94□□□□□ -0.66
ERBB3-218ENST00000551176 CENPJQ9HC77 1338 aaPredicted RBP10.94□□□□□ -0.66
ERBB3-218ENST00000551176 SOCS7O14512 581 aa10.94□□□□□ -0.66
ERBB3-218ENST00000551176 KIF1AQ12756 1690 aa10.94□□□□□ -0.66
ERBB3-218ENST00000551176 GPRASP1Q5JY77 1395 aa10.93□□□□□ -0.66
ERBB3-218ENST00000551176 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
ERBB3-218ENST00000551176 NUDT16Q96DE0 195 aaKnown RBP10.93□□□□□ -0.66
ERBB3-218ENST00000551176 EIF3AQ14152 1382 aaKnown RBP10.92□□□□□ -0.66
ERBB3-218ENST00000551176 COL22A1Q8NFW1 1626 aaPredicted RBP10.92□□□□□ -0.66
ERBB3-218ENST00000551176 PSME1Q06323 249 aa10.92□□□□□ -0.66
ERBB3-218ENST00000551176 C8orf37Q96NL8 207 aa10.92□□□□□ -0.66
ERBB3-218ENST00000551176 RGPD8O14715 1765 aaPredicted RBP10.92□□□□□ -0.66
ERBB3-218ENST00000551176 SBNO1A3KN83 1393 aa10.91□□□□□ -0.66
ERBB3-218ENST00000551176 AFF2P51816 1311 aa10.91□□□□□ -0.66
ERBB3-218ENST00000551176 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
ERBB3-218ENST00000551176 RALGAPBQ86X10 1494 aa10.9□□□□□ -0.66
ERBB3-218ENST00000551176 MSH5O43196 834 aa10.9□□□□□ -0.66
ERBB3-218ENST00000551176 CABLES1Q8TDN4 633 aa10.9□□□□□ -0.66
ERBB3-218ENST00000551176 CABP2Q9NPB3 220 aa10.9□□□□□ -0.66
ERBB3-218ENST00000551176 ZNF772Q68DY9 489 aaPredicted RBP10.89□□□□□ -0.67
ERBB3-218ENST00000551176 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
ERBB3-218ENST00000551176 PLEKHG3A1L390 1219 aa10.88□□□□□ -0.67
ERBB3-218ENST00000551176 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
ERBB3-218ENST00000551176 SRPK2P78362 688 aaKnown RBP10.88□□□□□ -0.67
ERBB3-218ENST00000551176 NGDNQ8NEJ9 315 aaKnown RBP10.88□□□□□ -0.67
ERBB3-218ENST00000551176 NGLY1Q96IV0 654 aa10.88□□□□□ -0.67
ERBB3-218ENST00000551176 CARD11Q9BXL7 1154 aa10.88□□□□□ -0.67
ERBB3-218ENST00000551176 QRICH2Q9H0J4 1663 aa10.88□□□□□ -0.67
ERBB3-218ENST00000551176 POLR3AO14802 1390 aaPredicted RBP10.88□□□□□ -0.67
ERBB3-218ENST00000551176 ACEP12821 1306 aa10.87□□□□□ -0.67
ERBB3-218ENST00000551176 TRPM3Q9HCF6 1732 aaPredicted RBP10.87□□□□□ -0.67
ERBB3-218ENST00000551176 LMOD2Q6P5Q4 547 aa10.87□□□□□ -0.67
ERBB3-218ENST00000551176 FNBP4Q8N3X1 1017 aaPredicted RBP10.87□□□□□ -0.67
ERBB3-218ENST00000551176 TOPAZ1Q8N9V7 1692 aa10.87□□□□□ -0.67
ERBB3-218ENST00000551176 PPIP5K1Q6PFW1 1433 aa10.86□□□□□ -0.67
ERBB3-218ENST00000551176 ARHGEF10O15013 1369 aa10.86□□□□□ -0.67
ERBB3-218ENST00000551176 BCL9LQ86UU0 1499 aa10.86□□□□□ -0.67
ERBB3-218ENST00000551176 EVC2Q86UK5 1308 aa10.85□□□□□ -0.67
ERBB3-218ENST00000551176 PAK3O75914 559 aaPredicted RBP10.85□□□□□ -0.67
ERBB3-218ENST00000551176 QTRT2Q9H974 415 aaKnown RBP10.85□□□□□ -0.67
ERBB3-218ENST00000551176 CABP1Q9NZU7 370 aa10.85□□□□□ -0.67
ERBB3-218ENST00000551176 USP21Q9UK80 565 aa10.85□□□□□ -0.67
ERBB3-218ENST00000551176 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
ERBB3-218ENST00000551176 RXRBP28702 533 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms