RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 RBM6P78332 1123 aaKnown RBP19.22■□□□□ 0.67
PTCH1-221ENST00000550914 FOXD1Q16676 465 aa19.22■□□□□ 0.67
PTCH1-221ENST00000550914 KNDC1Q76NI1 1749 aa19.22■□□□□ 0.67
PTCH1-221ENST00000550914 ADGRF5Q8IZF2 1346 aa19.22■□□□□ 0.67
PTCH1-221ENST00000550914 QTRT2Q9H974 415 aaKnown RBP19.21■□□□□ 0.67
PTCH1-221ENST00000550914 MPHOSPH9Q99550 1183 aa19.2■□□□□ 0.66
PTCH1-221ENST00000550914 NPHP3Q7Z494 1330 aa19.2■□□□□ 0.66
PTCH1-221ENST00000550914 LRPPRCP42704 1394 aaKnown RBP19.19■□□□□ 0.66
PTCH1-221ENST00000550914 NGLY1Q96IV0 654 aa19.19■□□□□ 0.66
PTCH1-221ENST00000550914 ABCC11Q96J66 1382 aa19.19■□□□□ 0.66
PTCH1-221ENST00000550914 RGS12O14924 1447 aa19.18■□□□□ 0.66
PTCH1-221ENST00000550914 PIK3C2GO75747 1445 aa19.18■□□□□ 0.66
PTCH1-221ENST00000550914 PXDNQ92626 1479 aa19.17■□□□□ 0.66
PTCH1-221ENST00000550914 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
PTCH1-221ENST00000550914 RGL3Q3MIN7 710 aa19.17■□□□□ 0.66
PTCH1-221ENST00000550914 MYOM2P54296 1465 aa19.16■□□□□ 0.66
PTCH1-221ENST00000550914 ESCO1Q5FWF5 840 aa19.16■□□□□ 0.66
PTCH1-221ENST00000550914 MARF1Q9Y4F3 1742 aaKnown RBP19.16■□□□□ 0.66
PTCH1-221ENST00000550914 FNBP4Q8N3X1 1017 aaPredicted RBP19.15■□□□□ 0.66
PTCH1-221ENST00000550914 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.66
PTCH1-221ENST00000550914 WAPLQ7Z5K2 1190 aa19.13■□□□□ 0.65
PTCH1-221ENST00000550914 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
PTCH1-221ENST00000550914 STK26Q9P289 416 aa19.13■□□□□ 0.65
PTCH1-221ENST00000550914 USP21Q9UK80 565 aa19.13■□□□□ 0.65
PTCH1-221ENST00000550914 TRPC5Q9UL62 973 aaPredicted RBP19.13■□□□□ 0.65
PTCH1-221ENST00000550914 YTHDC2Q9H6S0 1430 aaKnown RBP19.13■□□□□ 0.65
PTCH1-221ENST00000550914 KIF1AQ12756 1690 aa19.13■□□□□ 0.65
PTCH1-221ENST00000550914 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
PTCH1-221ENST00000550914 ATRNO75882 1429 aa19.11■□□□□ 0.65
PTCH1-221ENST00000550914 FOXO3O43524 673 aa19.11■□□□□ 0.65
PTCH1-221ENST00000550914 TMEM132EQ6IEE7 984 aa19.11■□□□□ 0.65
PTCH1-221ENST00000550914 EP400Q96L91 3159 aa19.11■□□□□ 0.65
PTCH1-221ENST00000550914 PLEKHH1Q9ULM0 1364 aa19.09■□□□□ 0.65
PTCH1-221ENST00000550914 C14orf93Q9H972 538 aaKnown RBP19.09■□□□□ 0.65
PTCH1-221ENST00000550914 ATAD2Q6PL18 1390 aa19.07■□□□□ 0.64
PTCH1-221ENST00000550914 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.07■□□□□ 0.64
PTCH1-221ENST00000550914 BCL9LQ86UU0 1499 aa19.06■□□□□ 0.64
PTCH1-221ENST00000550914 RGPD8O14715 1765 aaPredicted RBP19.06■□□□□ 0.64
PTCH1-221ENST00000550914 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
PTCH1-221ENST00000550914 NUTM2FA1L443 756 aa19.05■□□□□ 0.64
PTCH1-221ENST00000550914 XPCQ01831 940 aaPredicted RBP19.05■□□□□ 0.64
PTCH1-221ENST00000550914 SPATA31A3Q5VYP0 1347 aa19.04■□□□□ 0.64
PTCH1-221ENST00000550914 SRCAPQ6ZRS2 3230 aa19.03■□□□□ 0.64
PTCH1-221ENST00000550914 DLC1Q96QB1 1528 aa19.02■□□□□ 0.64
PTCH1-221ENST00000550914 CFAP70Q5T0N1 1121 aa19.01■□□□□ 0.63
PTCH1-221ENST00000550914 SLIT2O94813 1529 aa19■□□□□ 0.63
PTCH1-221ENST00000550914 USP32Q8NFA0 1604 aa19■□□□□ 0.63
PTCH1-221ENST00000550914 KRT28Q7Z3Y7 464 aa19■□□□□ 0.63
PTCH1-221ENST00000550914 GJD4Q96KN9 370 aaPredicted RBP19■□□□□ 0.63
PTCH1-221ENST00000550914 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
PTCH1-221ENST00000550914 RAB3GAP2Q9H2M9 1393 aa18.99■□□□□ 0.63
PTCH1-221ENST00000550914 PSME1Q06323 249 aa18.99■□□□□ 0.63
PTCH1-221ENST00000550914 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
PTCH1-221ENST00000550914 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
PTCH1-221ENST00000550914 PRAM1Q96QH2 718 aa18.98■□□□□ 0.63
PTCH1-221ENST00000550914 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
PTCH1-221ENST00000550914 SBNO1A3KN83 1393 aa18.97■□□□□ 0.63
PTCH1-221ENST00000550914 CCDC125Q86Z20 511 aa18.97■□□□□ 0.63
PTCH1-221ENST00000550914 UNC5CLQ8IV45 518 aa18.97■□□□□ 0.63
PTCH1-221ENST00000550914 ADGRB1O14514 1584 aa18.97■□□□□ 0.63
PTCH1-221ENST00000550914 NWD2Q9ULI1 1742 aa18.97■□□□□ 0.63
PTCH1-221ENST00000550914 ABCA3Q99758 1704 aa18.95■□□□□ 0.62
PTCH1-221ENST00000550914 STAC3Q96MF2 364 aa18.95■□□□□ 0.62
PTCH1-221ENST00000550914 RALGAPBQ86X10 1494 aa18.95■□□□□ 0.62
PTCH1-221ENST00000550914 ARHGEF10O15013 1369 aa18.94■□□□□ 0.62
PTCH1-221ENST00000550914 GLI3P10071 1580 aa18.94■□□□□ 0.62
PTCH1-221ENST00000550914 POGKQ9P215 609 aa18.94■□□□□ 0.62
PTCH1-221ENST00000550914 PLCH1Q4KWH8 1693 aa18.93■□□□□ 0.62
PTCH1-221ENST00000550914 SAFB2Q14151 953 aaKnown RBP eCLIP18.92■□□□□ 0.62
PTCH1-221ENST00000550914 EIF3AQ14152 1382 aaKnown RBP18.92■□□□□ 0.62
PTCH1-221ENST00000550914 BRWD3Q6RI45 1802 aa18.91■□□□□ 0.62
PTCH1-221ENST00000550914 HAP1P54257 671 aaPredicted RBP18.91■□□□□ 0.62
PTCH1-221ENST00000550914 TRPM3Q9HCF6 1732 aaPredicted RBP18.91■□□□□ 0.62
PTCH1-221ENST00000550914 HRCP23327 699 aa18.9■□□□□ 0.62
PTCH1-221ENST00000550914 VPS72Q15906 364 aa18.89■□□□□ 0.61
PTCH1-221ENST00000550914 TULP4Q9NRJ4 1543 aa18.88■□□□□ 0.61
PTCH1-221ENST00000550914 ALS2Q96Q42 1657 aa18.88■□□□□ 0.61
PTCH1-221ENST00000550914 CABLES1Q8TDN4 633 aa18.87■□□□□ 0.61
PTCH1-221ENST00000550914 DCAF11Q8TEB1 546 aa18.87■□□□□ 0.61
PTCH1-221ENST00000550914 TRAK1Q9UPV9 953 aa18.87■□□□□ 0.61
PTCH1-221ENST00000550914 ONECUT3O60422 494 aaPredicted RBP18.86■□□□□ 0.61
PTCH1-221ENST00000550914 LMOD2Q6P5Q4 547 aa18.86■□□□□ 0.61
PTCH1-221ENST00000550914 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
PTCH1-221ENST00000550914 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
PTCH1-221ENST00000550914 BLMP54132 1417 aaPredicted RBP18.85■□□□□ 0.61
PTCH1-221ENST00000550914 GPRASP1Q5JY77 1395 aa18.85■□□□□ 0.61
PTCH1-221ENST00000550914 ITSN1Q15811 1721 aa18.84■□□□□ 0.61
PTCH1-221ENST00000550914 ARHGEF28Q8N1W1 1705 aaKnown RBP18.84■□□□□ 0.61
PTCH1-221ENST00000550914 WASLO00401 505 aaPredicted RBP18.84■□□□□ 0.61
PTCH1-221ENST00000550914 HIRIP3Q9BW71 556 aaPredicted RBP18.84■□□□□ 0.61
PTCH1-221ENST00000550914 KDM2AQ9Y2K7 1162 aa18.84■□□□□ 0.61
PTCH1-221ENST00000550914 NRAPQ86VF7 1730 aa18.83■□□□□ 0.61
PTCH1-221ENST00000550914 MINK1Q8N4C8 1332 aaPredicted RBP18.83■□□□□ 0.61
PTCH1-221ENST00000550914 FAM83GA6ND36 823 aa18.83■□□□□ 0.6
PTCH1-221ENST00000550914 SEPT12Q8IYM1 358 aa18.83■□□□□ 0.6
PTCH1-221ENST00000550914 COL14A1Q05707 1796 aaKnown RBP18.83■□□□□ 0.6
PTCH1-221ENST00000550914 PRR36Q9H6K5 1346 aa18.82■□□□□ 0.6
PTCH1-221ENST00000550914 CRYBG1Q9Y4K1 1723 aa18.81■□□□□ 0.6
PTCH1-221ENST00000550914 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
PTCH1-221ENST00000550914 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms