RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 IRX6P78412 446 aaPredicted RBP20.67■□□□□ 0.9
SCN8A-206ENST00000550891 ATAD2Q6PL18 1390 aa20.66■□□□□ 0.9
SCN8A-206ENST00000550891 INSRP06213 1382 aa20.65■□□□□ 0.9
SCN8A-206ENST00000550891 ADAMTS8Q9UP79 889 aa20.65■□□□□ 0.9
SCN8A-206ENST00000550891 NINLQ9Y2I6 1382 aa20.65■□□□□ 0.9
SCN8A-206ENST00000550891 TULP4Q9NRJ4 1543 aa20.64■□□□□ 0.9
SCN8A-206ENST00000550891 ANKRD36BQ8N2N9 1353 aa20.64■□□□□ 0.89
SCN8A-206ENST00000550891 PDE3BQ13370 1112 aa20.64■□□□□ 0.89
SCN8A-206ENST00000550891 TERF2IPQ9NYB0 399 aa20.64■□□□□ 0.89
SCN8A-206ENST00000550891 PTPRMP28827 1452 aa20.64■□□□□ 0.89
SCN8A-206ENST00000550891 CEBPAP49715 358 aaPredicted RBP20.63■□□□□ 0.89
SCN8A-206ENST00000550891 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
SCN8A-206ENST00000550891 ERICH6BQ5W0A0 696 aa20.61■□□□□ 0.89
SCN8A-206ENST00000550891 TMEM2Q9UHN6 1383 aa20.61■□□□□ 0.89
SCN8A-206ENST00000550891 CDK19Q9BWU1 502 aa20.6■□□□□ 0.89
SCN8A-206ENST00000550891 EID1Q9Y6B2 187 aa20.6■□□□□ 0.89
SCN8A-206ENST00000550891 HDGFL2Q7Z4V5 671 aaPredicted RBP20.6■□□□□ 0.89
SCN8A-206ENST00000550891 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
SCN8A-206ENST00000550891 WAPLQ7Z5K2 1190 aa20.59■□□□□ 0.89
SCN8A-206ENST00000550891 NLRP1Q9C000 1473 aa20.58■□□□□ 0.89
SCN8A-206ENST00000550891 ABCC11Q96J66 1382 aa20.58■□□□□ 0.89
SCN8A-206ENST00000550891 CFAP53Q96M91 514 aa20.58■□□□□ 0.88
SCN8A-206ENST00000550891 NSD2O96028 1365 aa20.57■□□□□ 0.88
SCN8A-206ENST00000550891 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
SCN8A-206ENST00000550891 DLC1Q96QB1 1528 aa20.55■□□□□ 0.88
SCN8A-206ENST00000550891 A0A1W2PP64 1363 aa20.54■□□□□ 0.88
SCN8A-206ENST00000550891 METP08581 1390 aa20.54■□□□□ 0.88
SCN8A-206ENST00000550891 CABP1Q9NZU7 370 aa20.52■□□□□ 0.88
SCN8A-206ENST00000550891 THEMISQ8N1K5 641 aaPredicted RBP20.52■□□□□ 0.87
SCN8A-206ENST00000550891 POLR3AO14802 1390 aaPredicted RBP20.52■□□□□ 0.87
SCN8A-206ENST00000550891 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
SCN8A-206ENST00000550891 PPP4R2Q9NY27 417 aa20.51■□□□□ 0.87
SCN8A-206ENST00000550891 PLEKHH1Q9ULM0 1364 aa20.51■□□□□ 0.87
SCN8A-206ENST00000550891 UBR1Q8IWV7 1749 aa20.51■□□□□ 0.87
SCN8A-206ENST00000550891 MTHFSP49914 203 aa20.5■□□□□ 0.87
SCN8A-206ENST00000550891 RCAN3Q9UKA8 241 aa20.49■□□□□ 0.87
SCN8A-206ENST00000550891 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
SCN8A-206ENST00000550891 GGNBP2Q9H3C7 697 aa20.49■□□□□ 0.87
SCN8A-206ENST00000550891 WASLO00401 505 aaPredicted RBP20.49■□□□□ 0.87
SCN8A-206ENST00000550891 CDCA7LQ96GN5 454 aa20.49■□□□□ 0.87
SCN8A-206ENST00000550891 FER1L4A9Z1Z3 1794 aa20.48■□□□□ 0.87
SCN8A-206ENST00000550891 LTKP29376 864 aa20.48■□□□□ 0.87
SCN8A-206ENST00000550891 SIRT1Q96EB6 747 aa20.48■□□□□ 0.87
SCN8A-206ENST00000550891 PLEKHG1Q9ULL1 1385 aa20.48■□□□□ 0.87
SCN8A-206ENST00000550891 NRXN3Q9Y4C0 1643 aa20.46■□□□□ 0.87
SCN8A-206ENST00000550891 SLC26A8Q96RN1 970 aa20.46■□□□□ 0.87
SCN8A-206ENST00000550891 FAM135BQ49AJ0 1406 aa20.46■□□□□ 0.87
SCN8A-206ENST00000550891 APAF1O14727 1248 aa20.46■□□□□ 0.87
SCN8A-206ENST00000550891 C3P01024 1663 aa20.45■□□□□ 0.86
SCN8A-206ENST00000550891 SETD1AO15047 1707 aaKnown RBP20.45■□□□□ 0.86
SCN8A-206ENST00000550891 GOLGA2Q08379 1002 aa20.45■□□□□ 0.86
SCN8A-206ENST00000550891 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
SCN8A-206ENST00000550891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
SCN8A-206ENST00000550891 FYB1O15117 783 aa20.43■□□□□ 0.86
SCN8A-206ENST00000550891 TECPR2O15040 1411 aa20.42■□□□□ 0.86
SCN8A-206ENST00000550891 RNF123Q5XPI4 1314 aa20.42■□□□□ 0.86
SCN8A-206ENST00000550891 ADAMTS13Q76LX8 1427 aa20.42■□□□□ 0.86
SCN8A-206ENST00000550891 NUDT16Q96DE0 195 aaKnown RBP20.42■□□□□ 0.86
SCN8A-206ENST00000550891 CCDC61Q9Y6R9 512 aa20.42■□□□□ 0.86
SCN8A-206ENST00000550891 ATP7BP35670 1465 aa20.4■□□□□ 0.86
SCN8A-206ENST00000550891 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
SCN8A-206ENST00000550891 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
SCN8A-206ENST00000550891 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.86
SCN8A-206ENST00000550891 PPIP5K1Q6PFW1 1433 aa20.4■□□□□ 0.86
SCN8A-206ENST00000550891 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
SCN8A-206ENST00000550891 TBX22Q9Y458 520 aa20.38■□□□□ 0.85
SCN8A-206ENST00000550891 CD163L1Q9NR16 1453 aa20.38■□□□□ 0.85
SCN8A-206ENST00000550891 ROBO2Q9HCK4 1378 aa20.38■□□□□ 0.85
SCN8A-206ENST00000550891 CPS1P31327 1500 aa20.38■□□□□ 0.85
SCN8A-206ENST00000550891 B4GALNT3Q6L9W6 998 aa20.37■□□□□ 0.85
SCN8A-206ENST00000550891 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
SCN8A-206ENST00000550891 DNAJC5Q9H3Z4 198 aa20.37■□□□□ 0.85
SCN8A-206ENST00000550891 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
SCN8A-206ENST00000550891 KNDC1Q76NI1 1749 aa20.37■□□□□ 0.85
SCN8A-206ENST00000550891 SLIT1O75093 1534 aa20.37■□□□□ 0.85
SCN8A-206ENST00000550891 NEUROD2Q15784 382 aa20.37■□□□□ 0.85
SCN8A-206ENST00000550891 CCDC136Q96JN2 1154 aa20.35■□□□□ 0.85
SCN8A-206ENST00000550891 MED14O60244 1454 aa20.35■□□□□ 0.85
SCN8A-206ENST00000550891 ARHGAP23Q9P227 1491 aa20.35■□□□□ 0.85
SCN8A-206ENST00000550891 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
SCN8A-206ENST00000550891 ZNF521Q96K83 1311 aa20.34■□□□□ 0.85
SCN8A-206ENST00000550891 ZNF692Q9BU19 519 aaPredicted RBP20.34■□□□□ 0.85
SCN8A-206ENST00000550891 E9PSI1 815 aa20.33■□□□□ 0.85
SCN8A-206ENST00000550891 NUTM2FA1L443 756 aa20.33■□□□□ 0.85
SCN8A-206ENST00000550891 EDC4Q6P2E9 1401 aaKnown RBP20.33■□□□□ 0.84
SCN8A-206ENST00000550891 DUSP27Q5VZP5 1158 aa20.32■□□□□ 0.84
SCN8A-206ENST00000550891 TCP11L2Q8N4U5 519 aa20.32■□□□□ 0.84
SCN8A-206ENST00000550891 SLFN5Q08AF3 891 aa20.32■□□□□ 0.84
SCN8A-206ENST00000550891 COG3Q96JB2 828 aa20.31■□□□□ 0.84
SCN8A-206ENST00000550891 DIAPH1O60610 1272 aaKnown RBP20.31■□□□□ 0.84
SCN8A-206ENST00000550891 RRP7AQ9Y3A4 280 aaKnown RBP20.31■□□□□ 0.84
SCN8A-206ENST00000550891 NCKAP5LQ9HCH0 1330 aa20.3■□□□□ 0.84
SCN8A-206ENST00000550891 ANKLE2Q86XL3 938 aa20.3■□□□□ 0.84
SCN8A-206ENST00000550891 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.3■□□□□ 0.84
SCN8A-206ENST00000550891 MAPK8IP3Q9UPT6 1336 aa20.3■□□□□ 0.84
SCN8A-206ENST00000550891 RIMS1Q86UR5 1692 aaKnown RBP20.3■□□□□ 0.84
SCN8A-206ENST00000550891 PNNQ9H307 717 aaKnown RBP20.29■□□□□ 0.84
SCN8A-206ENST00000550891 NEFMP07197 916 aa20.29■□□□□ 0.84
SCN8A-206ENST00000550891 CPSF1Q10570 1443 aaKnown RBP20.29■□□□□ 0.84
SCN8A-206ENST00000550891 WWC1Q8IX03 1113 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms