RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 LORP23490 312 aaPredicted RBP8.93□□□□□ -0.98
TSPAN8-205ENST00000550818 METTL3Q86U44 580 aaKnown RBP8.93□□□□□ -0.98
TSPAN8-205ENST00000550818 ATP6V1AP38606 617 aa8.92□□□□□ -0.98
TSPAN8-205ENST00000550818 BRICD5Q6PL45 260 aa8.92□□□□□ -0.98
TSPAN8-205ENST00000550818 MRGPRX2Q96LB1 330 aa8.92□□□□□ -0.98
TSPAN8-205ENST00000550818 SALL2Q9Y467 1007 aaPredicted RBP8.92□□□□□ -0.98
TSPAN8-205ENST00000550818 ZBTB24O43167 697 aaPredicted RBP8.91□□□□□ -0.98
TSPAN8-205ENST00000550818 HPS1Q92902 700 aa8.91□□□□□ -0.98
TSPAN8-205ENST00000550818 TRIM32Q13049 653 aa8.9□□□□□ -0.98
TSPAN8-205ENST00000550818 RDH13Q8NBN7 331 aa8.89□□□□□ -0.99
TSPAN8-205ENST00000550818 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
TSPAN8-205ENST00000550818 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
TSPAN8-205ENST00000550818 MSS51Q4VC12 460 aa8.88□□□□□ -0.99
TSPAN8-205ENST00000550818 DAXXQ9UER7 740 aaPredicted RBP8.88□□□□□ -0.99
TSPAN8-205ENST00000550818 FAM181BA6NEQ2 426 aa8.87□□□□□ -0.99
TSPAN8-205ENST00000550818 FECHP22830 423 aa8.87□□□□□ -0.99
TSPAN8-205ENST00000550818 GMPRP36959 345 aa8.87□□□□□ -0.99
TSPAN8-205ENST00000550818 GCGRP47871 477 aa8.87□□□□□ -0.99
TSPAN8-205ENST00000550818 RNF19BQ6ZMZ0 732 aa8.87□□□□□ -0.99
TSPAN8-205ENST00000550818 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
TSPAN8-205ENST00000550818 ZSCAN1Q8NBB4 408 aa8.85□□□□□ -0.99
TSPAN8-205ENST00000550818 NXF1Q9UBU9 619 aaKnown RBP8.85□□□□□ -0.99
TSPAN8-205ENST00000550818 SLC16A10Q8TF71 515 aa8.84□□□□□ -0.99
TSPAN8-205ENST00000550818 MMP16P51512 607 aa8.83□□□□□ -1
TSPAN8-205ENST00000550818 HIC1Q14526 733 aa8.83□□□□□ -1
TSPAN8-205ENST00000550818 NLRP7Q8WX94 980 aa8.83□□□□□ -1
TSPAN8-205ENST00000550818 REPIN1Q9BWE0 567 aaKnown RBP8.82□□□□□ -1
TSPAN8-205ENST00000550818 SKOR1P84550 965 aa8.8□□□□□ -1
TSPAN8-205ENST00000550818 RC3H1Q5TC82 1133 aaKnown RBP8.8□□□□□ -1
TSPAN8-205ENST00000550818 VEGFBP49765 207 aa8.79□□□□□ -1
TSPAN8-205ENST00000550818 NPAS3Q8IXF0 933 aa8.79□□□□□ -1
TSPAN8-205ENST00000550818 IRF7Q92985 503 aa8.79□□□□□ -1
TSPAN8-205ENST00000550818 SEMA3EO15041 775 aa8.78□□□□□ -1
TSPAN8-205ENST00000550818 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
TSPAN8-205ENST00000550818 PHOX2BQ99453 314 aa8.78□□□□□ -1
TSPAN8-205ENST00000550818 ERBB4Q15303 1308 aa8.78□□□□□ -1
TSPAN8-205ENST00000550818 H3BM21 787 aa8.77□□□□□ -1.01
TSPAN8-205ENST00000550818 DXOO77932 396 aaKnown RBP8.77□□□□□ -1.01
TSPAN8-205ENST00000550818 BMP1P13497 986 aa8.77□□□□□ -1.01
TSPAN8-205ENST00000550818 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
TSPAN8-205ENST00000550818 SULF1Q8IWU6 871 aa8.77□□□□□ -1.01
TSPAN8-205ENST00000550818 ALDH1A1P00352 501 aa8.76□□□□□ -1.01
TSPAN8-205ENST00000550818 WNT7BP56706 349 aa8.75□□□□□ -1.01
TSPAN8-205ENST00000550818 Q3C1V9 767 aa8.75□□□□□ -1.01
TSPAN8-205ENST00000550818 GNPATO15228 680 aa8.74□□□□□ -1.01
TSPAN8-205ENST00000550818 GRIPAP1Q4V328 841 aa8.74□□□□□ -1.01
TSPAN8-205ENST00000550818 USB1Q9BQ65 265 aaKnown RBP8.74□□□□□ -1.01
TSPAN8-205ENST00000550818 GPR37O15354 613 aa8.73□□□□□ -1.01
TSPAN8-205ENST00000550818 RBM26Q5T8P6 1007 aaKnown RBP8.73□□□□□ -1.01
TSPAN8-205ENST00000550818 SIAH2O43255 324 aa8.72□□□□□ -1.01
TSPAN8-205ENST00000550818 CCDC24Q8N4L8 307 aa8.72□□□□□ -1.01
TSPAN8-205ENST00000550818 CAPN5O15484 640 aaPredicted RBP8.7□□□□□ -1.02
TSPAN8-205ENST00000550818 PRKCSHP14314 528 aaPredicted RBP8.69□□□□□ -1.02
TSPAN8-205ENST00000550818 P3H3Q8IVL6 736 aa8.67□□□□□ -1.02
TSPAN8-205ENST00000550818 HLA-CQ95604 372 aa8.67□□□□□ -1.02
TSPAN8-205ENST00000550818 GSK3AP49840 483 aa8.66□□□□□ -1.02
TSPAN8-205ENST00000550818 TPRNQ4KMQ1 711 aa8.66□□□□□ -1.02
TSPAN8-205ENST00000550818 ZFP42Q96MM3 310 aa8.66□□□□□ -1.02
TSPAN8-205ENST00000550818 CD46P15529 392 aa8.65□□□□□ -1.02
TSPAN8-205ENST00000550818 TESPA1A2RU30 521 aaPredicted RBP8.64□□□□□ -1.03
TSPAN8-205ENST00000550818 KDM4AO75164 1064 aa8.64□□□□□ -1.03
TSPAN8-205ENST00000550818 PTCRAQ6ISU1 281 aaPredicted RBP8.64□□□□□ -1.03
TSPAN8-205ENST00000550818 EHBP1Q8NDI1 1231 aa8.64□□□□□ -1.03
TSPAN8-205ENST00000550818 WASF2Q9Y6W5 498 aa8.64□□□□□ -1.03
TSPAN8-205ENST00000550818 VSIG8P0DPA2 414 aa8.63□□□□□ -1.03
TSPAN8-205ENST00000550818 KCTD17Q8N5Z5 321 aa8.63□□□□□ -1.03
TSPAN8-205ENST00000550818 KCNMA1Q12791 1236 aa8.62□□□□□ -1.03
TSPAN8-205ENST00000550818 JUNDP17535 347 aa8.61□□□□□ -1.03
TSPAN8-205ENST00000550818 SH3BP2P78314 561 aa8.59□□□□□ -1.03
TSPAN8-205ENST00000550818 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
TSPAN8-205ENST00000550818 SOBPA7XYQ1 873 aa8.58□□□□□ -1.04
TSPAN8-205ENST00000550818 HOXA2O43364 376 aa8.58□□□□□ -1.04
TSPAN8-205ENST00000550818 USP46P62068 366 aa8.58□□□□□ -1.04
TSPAN8-205ENST00000550818 NUDT12Q9BQG2 462 aa8.58□□□□□ -1.04
TSPAN8-205ENST00000550818 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
TSPAN8-205ENST00000550818 MRPL14Q6P1L8 145 aaKnown RBP8.57□□□□□ -1.04
TSPAN8-205ENST00000550818 SMYD5Q6GMV2 418 aa8.56□□□□□ -1.04
TSPAN8-205ENST00000550818 TLL2Q9Y6L7 1015 aa8.56□□□□□ -1.04
TSPAN8-205ENST00000550818 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
TSPAN8-205ENST00000550818 NNTQ13423 1086 aa8.53□□□□□ -1.04
TSPAN8-205ENST00000550818 SCARF1Q14162 830 aa8.53□□□□□ -1.04
TSPAN8-205ENST00000550818 TMEM151AQ8N4L1 468 aa8.53□□□□□ -1.04
TSPAN8-205ENST00000550818 TIMP2P16035 220 aa8.52□□□□□ -1.05
TSPAN8-205ENST00000550818 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
TSPAN8-205ENST00000550818 KLF16Q9BXK1 252 aaPredicted RBP8.52□□□□□ -1.05
TSPAN8-205ENST00000550818 GDF11O95390 407 aa8.51□□□□□ -1.05
TSPAN8-205ENST00000550818 RASSF7Q02833 373 aa8.51□□□□□ -1.05
TSPAN8-205ENST00000550818 CCNYL3P0C7X3 344 aa8.5□□□□□ -1.05
TSPAN8-205ENST00000550818 WDR4P57081 412 aaKnown RBP8.5□□□□□ -1.05
TSPAN8-205ENST00000550818 MPNDQ8N594 471 aa8.5□□□□□ -1.05
TSPAN8-205ENST00000550818 MDM2Q00987 491 aaPredicted RBP8.49□□□□□ -1.05
TSPAN8-205ENST00000550818 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
TSPAN8-205ENST00000550818 BAP1Q92560 729 aa8.49□□□□□ -1.05
TSPAN8-205ENST00000550818 UNC93B1Q9H1C4 597 aa8.49□□□□□ -1.05
TSPAN8-205ENST00000550818 PLEKHG3A1L390 1219 aa8.48□□□□□ -1.05
TSPAN8-205ENST00000550818 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
TSPAN8-205ENST00000550818 ADH1CP00326 375 aa8.48□□□□□ -1.05
TSPAN8-205ENST00000550818 MS4A1P11836 297 aa8.48□□□□□ -1.05
TSPAN8-205ENST00000550818 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
TSPAN8-205ENST00000550818 GPIHBP1Q8IV16 184 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms