RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 ADAMTS2O95450 1211 aa18.95■□□□□ 0.62
LETMD1-222ENST00000550274 QTRT2Q9H974 415 aaKnown RBP18.95■□□□□ 0.62
LETMD1-222ENST00000550274 RBM6P78332 1123 aaKnown RBP18.93■□□□□ 0.62
LETMD1-222ENST00000550274 ADGRF5Q8IZF2 1346 aa18.93■□□□□ 0.62
LETMD1-222ENST00000550274 SPATA31E1Q6ZUB1 1445 aa18.92■□□□□ 0.62
LETMD1-222ENST00000550274 NGLY1Q96IV0 654 aa18.92■□□□□ 0.62
LETMD1-222ENST00000550274 CCDC144AA2RUR9 1427 aa18.91■□□□□ 0.62
LETMD1-222ENST00000550274 FMN2Q9NZ56 1722 aa18.91■□□□□ 0.62
LETMD1-222ENST00000550274 EP400Q96L91 3159 aa18.91■□□□□ 0.62
LETMD1-222ENST00000550274 PXDNQ92626 1479 aa18.91■□□□□ 0.62
LETMD1-222ENST00000550274 RGPD8O14715 1765 aaPredicted RBP18.91■□□□□ 0.62
LETMD1-222ENST00000550274 TECPR2O15040 1411 aa18.9■□□□□ 0.62
LETMD1-222ENST00000550274 MYOM2P54296 1465 aa18.9■□□□□ 0.62
LETMD1-222ENST00000550274 RGL3Q3MIN7 710 aa18.88■□□□□ 0.61
LETMD1-222ENST00000550274 ESCO1Q5FWF5 840 aa18.87■□□□□ 0.61
LETMD1-222ENST00000550274 USP21Q9UK80 565 aa18.87■□□□□ 0.61
LETMD1-222ENST00000550274 PIK3C2GO75747 1445 aa18.86■□□□□ 0.61
LETMD1-222ENST00000550274 LRPPRCP42704 1394 aaKnown RBP18.86■□□□□ 0.61
LETMD1-222ENST00000550274 PLEKHH1Q9ULM0 1364 aa18.86■□□□□ 0.61
LETMD1-222ENST00000550274 NPHP3Q7Z494 1330 aa18.86■□□□□ 0.61
LETMD1-222ENST00000550274 WAPLQ7Z5K2 1190 aa18.86■□□□□ 0.61
LETMD1-222ENST00000550274 STK26Q9P289 416 aa18.86■□□□□ 0.61
LETMD1-222ENST00000550274 KIF1AQ12756 1690 aa18.85■□□□□ 0.61
LETMD1-222ENST00000550274 ATRNO75882 1429 aa18.85■□□□□ 0.61
LETMD1-222ENST00000550274 ANKRD30BQ9BXX2 1392 aa18.85■□□□□ 0.61
LETMD1-222ENST00000550274 XPCQ01831 940 aaPredicted RBP18.85■□□□□ 0.61
LETMD1-222ENST00000550274 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
LETMD1-222ENST00000550274 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.85■□□□□ 0.61
LETMD1-222ENST00000550274 TMEM132EQ6IEE7 984 aa18.84■□□□□ 0.61
LETMD1-222ENST00000550274 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
LETMD1-222ENST00000550274 SRCAPQ6ZRS2 3230 aa18.83■□□□□ 0.61
LETMD1-222ENST00000550274 ABCC11Q96J66 1382 aa18.83■□□□□ 0.61
LETMD1-222ENST00000550274 NUTM2FA1L443 756 aa18.83■□□□□ 0.6
LETMD1-222ENST00000550274 FOXO3O43524 673 aa18.83■□□□□ 0.6
LETMD1-222ENST00000550274 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.6
LETMD1-222ENST00000550274 BCL9LQ86UU0 1499 aa18.82■□□□□ 0.6
LETMD1-222ENST00000550274 YTHDC2Q9H6S0 1430 aaKnown RBP18.82■□□□□ 0.6
LETMD1-222ENST00000550274 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
LETMD1-222ENST00000550274 ABCA3Q99758 1704 aa18.79■□□□□ 0.6
LETMD1-222ENST00000550274 BRWD3Q6RI45 1802 aa18.79■□□□□ 0.6
LETMD1-222ENST00000550274 USP32Q8NFA0 1604 aa18.78■□□□□ 0.6
LETMD1-222ENST00000550274 NRXN1Q9ULB1 1477 aa18.77■□□□□ 0.6
LETMD1-222ENST00000550274 GLI3P10071 1580 aa18.76■□□□□ 0.59
LETMD1-222ENST00000550274 PLCH1Q4KWH8 1693 aa18.76■□□□□ 0.59
LETMD1-222ENST00000550274 SPATA31A3Q5VYP0 1347 aa18.74■□□□□ 0.59
LETMD1-222ENST00000550274 SLIT2O94813 1529 aa18.74■□□□□ 0.59
LETMD1-222ENST00000550274 C14orf93Q9H972 538 aaKnown RBP18.73■□□□□ 0.59
LETMD1-222ENST00000550274 NWD2Q9ULI1 1742 aa18.72■□□□□ 0.59
LETMD1-222ENST00000550274 CFAP70Q5T0N1 1121 aa18.72■□□□□ 0.59
LETMD1-222ENST00000550274 SIRT1Q96EB6 747 aa18.71■□□□□ 0.59
LETMD1-222ENST00000550274 GJD4Q96KN9 370 aaPredicted RBP18.71■□□□□ 0.59
LETMD1-222ENST00000550274 TNS3Q68CZ2 1445 aa18.71■□□□□ 0.59
LETMD1-222ENST00000550274 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
LETMD1-222ENST00000550274 ADGRB2O60241 1585 aa18.7■□□□□ 0.58
LETMD1-222ENST00000550274 KRT28Q7Z3Y7 464 aa18.7■□□□□ 0.58
LETMD1-222ENST00000550274 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
LETMD1-222ENST00000550274 DHX57Q6P158 1386 aaKnown RBP18.69■□□□□ 0.58
LETMD1-222ENST00000550274 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
LETMD1-222ENST00000550274 ADGRB1O14514 1584 aa18.68■□□□□ 0.58
LETMD1-222ENST00000550274 UNC5CLQ8IV45 518 aa18.68■□□□□ 0.58
LETMD1-222ENST00000550274 PHF8Q9UPP1 1060 aa18.68■□□□□ 0.58
LETMD1-222ENST00000550274 SAFB2Q14151 953 aaKnown RBP eCLIP18.67■□□□□ 0.58
LETMD1-222ENST00000550274 PRAM1Q96QH2 718 aa18.67■□□□□ 0.58
LETMD1-222ENST00000550274 NRAPQ86VF7 1730 aa18.66■□□□□ 0.58
LETMD1-222ENST00000550274 CABLES1Q8TDN4 633 aa18.66■□□□□ 0.58
LETMD1-222ENST00000550274 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
LETMD1-222ENST00000550274 RAB3GAP2Q9H2M9 1393 aa18.65■□□□□ 0.58
LETMD1-222ENST00000550274 PLEKHG5O94827 1062 aa18.64■□□□□ 0.57
LETMD1-222ENST00000550274 ACIN1Q9UKV3 1341 aaKnown RBP18.64■□□□□ 0.57
LETMD1-222ENST00000550274 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
LETMD1-222ENST00000550274 CRYBG1Q9Y4K1 1723 aa18.63■□□□□ 0.57
LETMD1-222ENST00000550274 ANKARQ7Z5J8 1434 aa18.63■□□□□ 0.57
LETMD1-222ENST00000550274 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
LETMD1-222ENST00000550274 PSME1Q06323 249 aa18.62■□□□□ 0.57
LETMD1-222ENST00000550274 CCDC125Q86Z20 511 aa18.62■□□□□ 0.57
LETMD1-222ENST00000550274 PIAS4Q8N2W9 510 aaPredicted RBP18.62■□□□□ 0.57
LETMD1-222ENST00000550274 ARHGEF28Q8N1W1 1705 aaKnown RBP18.61■□□□□ 0.57
LETMD1-222ENST00000550274 PMFBP1Q8TBY8 1022 aa18.61■□□□□ 0.57
LETMD1-222ENST00000550274 POGKQ9P215 609 aa18.61■□□□□ 0.57
LETMD1-222ENST00000550274 ARHGEF10O15013 1369 aa18.6■□□□□ 0.57
LETMD1-222ENST00000550274 LMOD2Q6P5Q4 547 aa18.6■□□□□ 0.57
LETMD1-222ENST00000550274 ZRANB1Q9UGI0 708 aa18.6■□□□□ 0.57
LETMD1-222ENST00000550274 BLMP54132 1417 aaPredicted RBP18.59■□□□□ 0.57
LETMD1-222ENST00000550274 ITSN1Q15811 1721 aa18.59■□□□□ 0.57
LETMD1-222ENST00000550274 TULP4Q9NRJ4 1543 aa18.59■□□□□ 0.57
LETMD1-222ENST00000550274 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.57
LETMD1-222ENST00000550274 VPS72Q15906 364 aa18.58■□□□□ 0.56
LETMD1-222ENST00000550274 HIRIP3Q9BW71 556 aaPredicted RBP18.58■□□□□ 0.56
LETMD1-222ENST00000550274 TRAK1Q9UPV9 953 aa18.58■□□□□ 0.56
LETMD1-222ENST00000550274 PRR36Q9H6K5 1346 aa18.57■□□□□ 0.56
LETMD1-222ENST00000550274 SEPT12Q8IYM1 358 aa18.57■□□□□ 0.56
LETMD1-222ENST00000550274 MINK1Q8N4C8 1332 aaPredicted RBP18.55■□□□□ 0.56
LETMD1-222ENST00000550274 FAM83GA6ND36 823 aa18.55■□□□□ 0.56
LETMD1-222ENST00000550274 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
LETMD1-222ENST00000550274 ONECUT3O60422 494 aaPredicted RBP18.54■□□□□ 0.56
LETMD1-222ENST00000550274 DEFB132Q7Z7B7 95 aa18.54■□□□□ 0.56
LETMD1-222ENST00000550274 KDM2AQ9Y2K7 1162 aa18.54■□□□□ 0.56
LETMD1-222ENST00000550274 EIF3AQ14152 1382 aaKnown RBP18.53■□□□□ 0.56
LETMD1-222ENST00000550274 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.56
LETMD1-222ENST00000550274 DCAF11Q8TEB1 546 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms