RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 NHSL1Q5SYE7 1610 aa26.13■■□□□ 1.77
TUBA1A-206ENST00000550254 SIN3AQ96ST3 1273 aa26.12■■□□□ 1.77
TUBA1A-206ENST00000550254 DLC1Q96QB1 1528 aa26.1■■□□□ 1.77
TUBA1A-206ENST00000550254 ORAI2Q96SN7 254 aa26.07■■□□□ 1.76
TUBA1A-206ENST00000550254 JCADQ9P266 1359 aa26.07■■□□□ 1.76
TUBA1A-206ENST00000550254 ILDR2Q71H61 639 aa26.06■■□□□ 1.76
TUBA1A-206ENST00000550254 DDX17Q92841 729 aaKnown RBP26.06■■□□□ 1.76
TUBA1A-206ENST00000550254 PRAM1Q96QH2 718 aa26.06■■□□□ 1.76
TUBA1A-206ENST00000550254 FMN2Q9NZ56 1722 aa26.05■■□□□ 1.76
TUBA1A-206ENST00000550254 KIAA1210Q9ULL0 1709 aa26.05■■□□□ 1.76
TUBA1A-206ENST00000550254 TRAK1Q9UPV9 953 aa26.05■■□□□ 1.76
TUBA1A-206ENST00000550254 SHPRHQ149N8 1683 aa26.03■■□□□ 1.76
TUBA1A-206ENST00000550254 L3MBTL2Q969R5 705 aa26.03■■□□□ 1.76
TUBA1A-206ENST00000550254 NEUROD1Q13562 356 aa26.02■■□□□ 1.76
TUBA1A-206ENST00000550254 SAFB2Q14151 953 aaKnown RBP eCLIP26.02■■□□□ 1.76
TUBA1A-206ENST00000550254 NUTM2FA1L443 756 aa26■■□□□ 1.75
TUBA1A-206ENST00000550254 POGKQ9P215 609 aa26■■□□□ 1.75
TUBA1A-206ENST00000550254 ARHGEF28Q8N1W1 1705 aaKnown RBP26■■□□□ 1.75
TUBA1A-206ENST00000550254 ESCO1Q5FWF5 840 aa25.98■■□□□ 1.75
TUBA1A-206ENST00000550254 RGPD8O14715 1765 aaPredicted RBP25.97■■□□□ 1.75
TUBA1A-206ENST00000550254 ADGRB2O60241 1585 aa25.97■■□□□ 1.75
TUBA1A-206ENST00000550254 NBPF1Q3BBV0 1214 aa25.96■■□□□ 1.75
TUBA1A-206ENST00000550254 PHF23Q9BUL5 403 aaPredicted RBP25.96■■□□□ 1.75
TUBA1A-206ENST00000550254 SOS2Q07890 1332 aaPredicted RBP25.95■■□□□ 1.75
TUBA1A-206ENST00000550254 LRRC59Q96AG4 307 aaKnown RBP25.95■■□□□ 1.74
TUBA1A-206ENST00000550254 SPATA31A6Q5VVP1 1343 aa25.94■■□□□ 1.74
TUBA1A-206ENST00000550254 LRP6O75581 1613 aa25.94■■□□□ 1.74
TUBA1A-206ENST00000550254 RGS17Q9UGC6 210 aaPredicted RBP25.93■■□□□ 1.74
TUBA1A-206ENST00000550254 USP32Q8NFA0 1604 aa25.92■■□□□ 1.74
TUBA1A-206ENST00000550254 HIRIP3Q9BW71 556 aaPredicted RBP25.91■■□□□ 1.74
TUBA1A-206ENST00000550254 MINK1Q8N4C8 1332 aaPredicted RBP25.9■■□□□ 1.74
TUBA1A-206ENST00000550254 TRPM1Q7Z4N2 1603 aa25.9■■□□□ 1.74
TUBA1A-206ENST00000550254 PNPLA6Q8IY17 1366 aa25.9■■□□□ 1.74
TUBA1A-206ENST00000550254 KIF1AQ12756 1690 aa25.9■■□□□ 1.74
TUBA1A-206ENST00000550254 FOXO3O43524 673 aa25.89■■□□□ 1.74
TUBA1A-206ENST00000550254 PXDNQ92626 1479 aa25.89■■□□□ 1.73
TUBA1A-206ENST00000550254 NPHP3Q7Z494 1330 aa25.88■■□□□ 1.73
TUBA1A-206ENST00000550254 ANKARQ7Z5J8 1434 aa25.85■■□□□ 1.73
TUBA1A-206ENST00000550254 NUTM2BA6NNL0 878 aaPredicted RBP25.84■■□□□ 1.73
TUBA1A-206ENST00000550254 NUTM2EB1AL46 878 aaPredicted RBP25.84■■□□□ 1.73
TUBA1A-206ENST00000550254 WASLO00401 505 aaPredicted RBP25.84■■□□□ 1.73
TUBA1A-206ENST00000550254 XPCQ01831 940 aaPredicted RBP25.84■■□□□ 1.73
TUBA1A-206ENST00000550254 NUTM2AQ8IVF1 878 aaPredicted RBP25.84■■□□□ 1.73
TUBA1A-206ENST00000550254 PHF8Q9UPP1 1060 aa25.84■■□□□ 1.73
TUBA1A-206ENST00000550254 TULP4Q9NRJ4 1543 aa25.83■■□□□ 1.72
TUBA1A-206ENST00000550254 NBPF8Q3BBV2 869 aa25.82■■□□□ 1.72
TUBA1A-206ENST00000550254 PRR36Q9H6K5 1346 aa25.82■■□□□ 1.72
TUBA1A-206ENST00000550254 COL22A1Q8NFW1 1626 aaPredicted RBP25.81■■□□□ 1.72
TUBA1A-206ENST00000550254 MEX3CQ5U5Q3 659 aaKnown RBP25.79■■□□□ 1.72
TUBA1A-206ENST00000550254 PCGF6Q9BYE7 350 aa25.79■■□□□ 1.72
TUBA1A-206ENST00000550254 EIF3AQ14152 1382 aaKnown RBP25.79■■□□□ 1.72
TUBA1A-206ENST00000550254 TONSLQ96HA7 1378 aa25.79■■□□□ 1.72
TUBA1A-206ENST00000550254 POTEAQ6S8J7 498 aa25.78■■□□□ 1.72
TUBA1A-206ENST00000550254 KRT28Q7Z3Y7 464 aa25.78■■□□□ 1.72
TUBA1A-206ENST00000550254 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
TUBA1A-206ENST00000550254 QRICH2Q9H0J4 1663 aa25.75■■□□□ 1.71
TUBA1A-206ENST00000550254 ATP7BP35670 1465 aa25.75■■□□□ 1.71
TUBA1A-206ENST00000550254 ROCK2O75116 1388 aaKnown RBP25.75■■□□□ 1.71
TUBA1A-206ENST00000550254 CENPJQ9HC77 1338 aaPredicted RBP25.75■■□□□ 1.71
TUBA1A-206ENST00000550254 CDK19Q9BWU1 502 aa25.75■■□□□ 1.71
TUBA1A-206ENST00000550254 SPATA31A3Q5VYP0 1347 aa25.74■■□□□ 1.71
TUBA1A-206ENST00000550254 SOCS7O14512 581 aa25.73■■□□□ 1.71
TUBA1A-206ENST00000550254 ITSN1Q15811 1721 aa25.73■■□□□ 1.71
TUBA1A-206ENST00000550254 NUDT16Q96DE0 195 aaKnown RBP25.72■■□□□ 1.71
TUBA1A-206ENST00000550254 GPRASP1Q5JY77 1395 aa25.71■■□□□ 1.71
TUBA1A-206ENST00000550254 TOPAZ1Q8N9V7 1692 aa25.71■■□□□ 1.71
TUBA1A-206ENST00000550254 PSME1Q06323 249 aa25.7■■□□□ 1.7
TUBA1A-206ENST00000550254 TRPM3Q9HCF6 1732 aaPredicted RBP25.7■■□□□ 1.7
TUBA1A-206ENST00000550254 ADAMTS2O95450 1211 aa25.69■■□□□ 1.7
TUBA1A-206ENST00000550254 TNS3Q68CZ2 1445 aa25.69■■□□□ 1.7
TUBA1A-206ENST00000550254 SBNO1A3KN83 1393 aa25.69■■□□□ 1.7
TUBA1A-206ENST00000550254 AFF2P51816 1311 aa25.67■■□□□ 1.7
TUBA1A-206ENST00000550254 RALGAPBQ86X10 1494 aa25.67■■□□□ 1.7
TUBA1A-206ENST00000550254 ZNF772Q68DY9 489 aaPredicted RBP25.67■■□□□ 1.7
TUBA1A-206ENST00000550254 C8orf37Q96NL8 207 aa25.67■■□□□ 1.7
TUBA1A-206ENST00000550254 MARF1Q9Y4F3 1742 aaKnown RBP25.66■■□□□ 1.7
TUBA1A-206ENST00000550254 NGDNQ8NEJ9 315 aaKnown RBP25.64■■□□□ 1.7
TUBA1A-206ENST00000550254 ALS2Q96Q42 1657 aa25.64■■□□□ 1.69
TUBA1A-206ENST00000550254 CCDC61Q9Y6R9 512 aa25.63■■□□□ 1.69
TUBA1A-206ENST00000550254 CARD11Q9BXL7 1154 aa25.62■■□□□ 1.69
TUBA1A-206ENST00000550254 CABP2Q9NPB3 220 aa25.62■■□□□ 1.69
TUBA1A-206ENST00000550254 SRPK2P78362 688 aaKnown RBP25.61■■□□□ 1.69
TUBA1A-206ENST00000550254 NGLY1Q96IV0 654 aa25.61■■□□□ 1.69
TUBA1A-206ENST00000550254 ABCA3Q99758 1704 aa25.6■■□□□ 1.69
TUBA1A-206ENST00000550254 PLEKHG3A1L390 1219 aa25.6■■□□□ 1.69
TUBA1A-206ENST00000550254 POLR3AO14802 1390 aaPredicted RBP25.59■■□□□ 1.69
TUBA1A-206ENST00000550254 ARHGEF10O15013 1369 aa25.59■■□□□ 1.69
TUBA1A-206ENST00000550254 LMOD2Q6P5Q4 547 aa25.59■■□□□ 1.69
TUBA1A-206ENST00000550254 ACEP12821 1306 aa25.59■■□□□ 1.69
TUBA1A-206ENST00000550254 CLSPNQ9HAW4 1339 aa25.59■■□□□ 1.69
TUBA1A-206ENST00000550254 CABLES1Q8TDN4 633 aa25.58■■□□□ 1.69
TUBA1A-206ENST00000550254 PPIP5K1Q6PFW1 1433 aa25.57■■□□□ 1.68
TUBA1A-206ENST00000550254 FNBP4Q8N3X1 1017 aaPredicted RBP25.57■■□□□ 1.68
TUBA1A-206ENST00000550254 EVC2Q86UK5 1308 aa25.56■■□□□ 1.68
TUBA1A-206ENST00000550254 PLEKHG5O94827 1062 aa25.54■■□□□ 1.68
TUBA1A-206ENST00000550254 QTRT2Q9H974 415 aaKnown RBP25.54■■□□□ 1.68
TUBA1A-206ENST00000550254 USP21Q9UK80 565 aa25.54■■□□□ 1.68
TUBA1A-206ENST00000550254 CRYBG1Q9Y4K1 1723 aa25.54■■□□□ 1.68
TUBA1A-206ENST00000550254 PAK3O75914 559 aaPredicted RBP25.53■■□□□ 1.68
TUBA1A-206ENST00000550254 SBNO2Q9Y2G9 1366 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms