RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SHPRHQ149N8 1683 aa25.05■■□□□ 1.6
CHMP1A-208ENST00000550102 C1orf167Q5SNV9 1468 aa25.05■■□□□ 1.6
CHMP1A-208ENST00000550102 PLEKHH1Q9ULM0 1364 aa25.03■■□□□ 1.6
CHMP1A-208ENST00000550102 ARHGEF28Q8N1W1 1705 aaKnown RBP25.02■■□□□ 1.6
CHMP1A-208ENST00000550102 WAPLQ7Z5K2 1190 aa25■■□□□ 1.59
CHMP1A-208ENST00000550102 JCADQ9P266 1359 aa25■■□□□ 1.59
CHMP1A-208ENST00000550102 ADGRB2O60241 1585 aa25■■□□□ 1.59
CHMP1A-208ENST00000550102 SIRT1Q96EB6 747 aa24.99■■□□□ 1.59
CHMP1A-208ENST00000550102 KIF1AQ12756 1690 aa24.96■■□□□ 1.59
CHMP1A-208ENST00000550102 ILDR2Q71H61 639 aa24.94■■□□□ 1.58
CHMP1A-208ENST00000550102 RGPD8O14715 1765 aaPredicted RBP24.94■■□□□ 1.58
CHMP1A-208ENST00000550102 PRAM1Q96QH2 718 aa24.93■■□□□ 1.58
CHMP1A-208ENST00000550102 PHF23Q9BUL5 403 aaPredicted RBP24.92■■□□□ 1.58
CHMP1A-208ENST00000550102 TRPM1Q7Z4N2 1603 aa24.9■■□□□ 1.58
CHMP1A-208ENST00000550102 POGKQ9P215 609 aa24.9■■□□□ 1.58
CHMP1A-208ENST00000550102 TRAK1Q9UPV9 953 aa24.9■■□□□ 1.58
CHMP1A-208ENST00000550102 ORAI2Q96SN7 254 aa24.89■■□□□ 1.58
CHMP1A-208ENST00000550102 SIN3AQ96ST3 1273 aa24.89■■□□□ 1.58
CHMP1A-208ENST00000550102 SAFB2Q14151 953 aaKnown RBP eCLIP24.88■■□□□ 1.57
CHMP1A-208ENST00000550102 SPATA31A6Q5VVP1 1343 aa24.87■■□□□ 1.57
CHMP1A-208ENST00000550102 USP32Q8NFA0 1604 aa24.87■■□□□ 1.57
CHMP1A-208ENST00000550102 NEUROD1Q13562 356 aa24.87■■□□□ 1.57
CHMP1A-208ENST00000550102 DDX17Q92841 729 aaKnown RBP24.86■■□□□ 1.57
CHMP1A-208ENST00000550102 L3MBTL2Q969R5 705 aa24.86■■□□□ 1.57
CHMP1A-208ENST00000550102 LRP6O75581 1613 aa24.86■■□□□ 1.57
CHMP1A-208ENST00000550102 ESCO1Q5FWF5 840 aa24.85■■□□□ 1.57
CHMP1A-208ENST00000550102 ITSN1Q15811 1721 aa24.84■■□□□ 1.57
CHMP1A-208ENST00000550102 NUTM2FA1L443 756 aa24.84■■□□□ 1.57
CHMP1A-208ENST00000550102 ANKARQ7Z5J8 1434 aa24.84■■□□□ 1.57
CHMP1A-208ENST00000550102 PXDNQ92626 1479 aa24.83■■□□□ 1.57
CHMP1A-208ENST00000550102 LRRC59Q96AG4 307 aaKnown RBP24.83■■□□□ 1.57
CHMP1A-208ENST00000550102 NPHP3Q7Z494 1330 aa24.83■■□□□ 1.56
CHMP1A-208ENST00000550102 COL22A1Q8NFW1 1626 aaPredicted RBP24.83■■□□□ 1.56
CHMP1A-208ENST00000550102 EIF3AQ14152 1382 aaKnown RBP24.82■■□□□ 1.56
CHMP1A-208ENST00000550102 PNPLA6Q8IY17 1366 aa24.82■■□□□ 1.56
CHMP1A-208ENST00000550102 TULP4Q9NRJ4 1543 aa24.82■■□□□ 1.56
CHMP1A-208ENST00000550102 SOS2Q07890 1332 aaPredicted RBP24.82■■□□□ 1.56
CHMP1A-208ENST00000550102 QRICH2Q9H0J4 1663 aa24.81■■□□□ 1.56
CHMP1A-208ENST00000550102 SOCS7O14512 581 aa24.81■■□□□ 1.56
CHMP1A-208ENST00000550102 MINK1Q8N4C8 1332 aaPredicted RBP24.81■■□□□ 1.56
CHMP1A-208ENST00000550102 NBPF1Q3BBV0 1214 aa24.78■■□□□ 1.56
CHMP1A-208ENST00000550102 HIRIP3Q9BW71 556 aaPredicted RBP24.77■■□□□ 1.56
CHMP1A-208ENST00000550102 TONSLQ96HA7 1378 aa24.77■■□□□ 1.56
CHMP1A-208ENST00000550102 FOXO3O43524 673 aa24.75■■□□□ 1.55
CHMP1A-208ENST00000550102 TOPAZ1Q8N9V7 1692 aa24.75■■□□□ 1.55
CHMP1A-208ENST00000550102 MEX3CQ5U5Q3 659 aaKnown RBP24.74■■□□□ 1.55
CHMP1A-208ENST00000550102 MARF1Q9Y4F3 1742 aaKnown RBP24.72■■□□□ 1.55
CHMP1A-208ENST00000550102 ATP7BP35670 1465 aa24.72■■□□□ 1.55
CHMP1A-208ENST00000550102 ROCK2O75116 1388 aaKnown RBP24.72■■□□□ 1.55
CHMP1A-208ENST00000550102 NUTM2BA6NNL0 878 aaPredicted RBP24.72■■□□□ 1.55
CHMP1A-208ENST00000550102 NUTM2EB1AL46 878 aaPredicted RBP24.72■■□□□ 1.55
CHMP1A-208ENST00000550102 WASLO00401 505 aaPredicted RBP24.72■■□□□ 1.55
CHMP1A-208ENST00000550102 NUTM2AQ8IVF1 878 aaPredicted RBP24.72■■□□□ 1.55
CHMP1A-208ENST00000550102 PHF8Q9UPP1 1060 aa24.72■■□□□ 1.55
CHMP1A-208ENST00000550102 XPCQ01831 940 aaPredicted RBP24.71■■□□□ 1.55
CHMP1A-208ENST00000550102 RGS17Q9UGC6 210 aaPredicted RBP24.71■■□□□ 1.55
CHMP1A-208ENST00000550102 TRPM3Q9HCF6 1732 aaPredicted RBP24.7■■□□□ 1.54
CHMP1A-208ENST00000550102 CENPJQ9HC77 1338 aaPredicted RBP24.69■■□□□ 1.54
CHMP1A-208ENST00000550102 RALGAPBQ86X10 1494 aa24.69■■□□□ 1.54
CHMP1A-208ENST00000550102 PRR36Q9H6K5 1346 aa24.68■■□□□ 1.54
CHMP1A-208ENST00000550102 ABCA3Q99758 1704 aa24.67■■□□□ 1.54
CHMP1A-208ENST00000550102 TNS3Q68CZ2 1445 aa24.67■■□□□ 1.54
CHMP1A-208ENST00000550102 GPRASP1Q5JY77 1395 aa24.66■■□□□ 1.54
CHMP1A-208ENST00000550102 PCGF6Q9BYE7 350 aa24.65■■□□□ 1.54
CHMP1A-208ENST00000550102 KRT28Q7Z3Y7 464 aa24.64■■□□□ 1.54
CHMP1A-208ENST00000550102 ALS2Q96Q42 1657 aa24.64■■□□□ 1.53
CHMP1A-208ENST00000550102 SPATA31A3Q5VYP0 1347 aa24.63■■□□□ 1.53
CHMP1A-208ENST00000550102 NBPF8Q3BBV2 869 aa24.63■■□□□ 1.53
CHMP1A-208ENST00000550102 SBNO1A3KN83 1393 aa24.63■■□□□ 1.53
CHMP1A-208ENST00000550102 PSME1Q06323 249 aa24.62■■□□□ 1.53
CHMP1A-208ENST00000550102 PMFBP1Q8TBY8 1022 aa24.62■■□□□ 1.53
CHMP1A-208ENST00000550102 POTEAQ6S8J7 498 aa24.6■■□□□ 1.53
CHMP1A-208ENST00000550102 CDK19Q9BWU1 502 aa24.6■■□□□ 1.53
CHMP1A-208ENST00000550102 ARHGEF10O15013 1369 aa24.59■■□□□ 1.53
CHMP1A-208ENST00000550102 ZNF772Q68DY9 489 aaPredicted RBP24.59■■□□□ 1.53
CHMP1A-208ENST00000550102 NUDT16Q96DE0 195 aaKnown RBP24.59■■□□□ 1.53
CHMP1A-208ENST00000550102 AFF2P51816 1311 aa24.59■■□□□ 1.53
CHMP1A-208ENST00000550102 ADAMTS2O95450 1211 aa24.58■■□□□ 1.53
CHMP1A-208ENST00000550102 C8orf37Q96NL8 207 aa24.58■■□□□ 1.53
CHMP1A-208ENST00000550102 CLSPNQ9HAW4 1339 aa24.57■■□□□ 1.52
CHMP1A-208ENST00000550102 CRYBG1Q9Y4K1 1723 aa24.56■■□□□ 1.52
CHMP1A-208ENST00000550102 NGDNQ8NEJ9 315 aaKnown RBP24.55■■□□□ 1.52
CHMP1A-208ENST00000550102 SRPK2P78362 688 aaKnown RBP24.54■■□□□ 1.52
CHMP1A-208ENST00000550102 POLR3AO14802 1390 aaPredicted RBP24.54■■□□□ 1.52
CHMP1A-208ENST00000550102 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.53■■□□□ 1.52
CHMP1A-208ENST00000550102 CARD11Q9BXL7 1154 aa24.53■■□□□ 1.52
CHMP1A-208ENST00000550102 CCDC61Q9Y6R9 512 aa24.53■■□□□ 1.52
CHMP1A-208ENST00000550102 PPIP5K1Q6PFW1 1433 aa24.52■■□□□ 1.52
CHMP1A-208ENST00000550102 NGLY1Q96IV0 654 aa24.52■■□□□ 1.52
CHMP1A-208ENST00000550102 EVC2Q86UK5 1308 aa24.52■■□□□ 1.52
CHMP1A-208ENST00000550102 PLCH1Q4KWH8 1693 aa24.52■■□□□ 1.52
CHMP1A-208ENST00000550102 SBNO2Q9Y2G9 1366 aa24.52■■□□□ 1.52
CHMP1A-208ENST00000550102 LMOD2Q6P5Q4 547 aa24.51■■□□□ 1.51
CHMP1A-208ENST00000550102 PHRF1Q9P1Y6 1649 aaKnown RBP24.49■■□□□ 1.51
CHMP1A-208ENST00000550102 NWD2Q9ULI1 1742 aa24.49■■□□□ 1.51
CHMP1A-208ENST00000550102 HAP1P54257 671 aaPredicted RBP24.48■■□□□ 1.51
CHMP1A-208ENST00000550102 CABP2Q9NPB3 220 aa24.48■■□□□ 1.51
CHMP1A-208ENST00000550102 AKAP12Q02952 1782 aa24.47■■□□□ 1.51
CHMP1A-208ENST00000550102 ACEP12821 1306 aa24.47■■□□□ 1.51
CHMP1A-208ENST00000550102 PLEKHG3A1L390 1219 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms