RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 C1orf167Q5SNV9 1468 aa14.29□□□□□ -0.12
HDAC7-229ENST00000549883 RGPD8O14715 1765 aaPredicted RBP14.27□□□□□ -0.12
HDAC7-229ENST00000549883 CDC42BPGQ6DT37 1551 aa14.27□□□□□ -0.12
HDAC7-229ENST00000549883 NUTM2FA1L443 756 aa14.27□□□□□ -0.13
HDAC7-229ENST00000549883 TRIM26Q12899 539 aaPredicted RBP14.27□□□□□ -0.13
HDAC7-229ENST00000549883 SAFB2Q14151 953 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDAC7-229ENST00000549883 FMN2Q9NZ56 1722 aa14.26□□□□□ -0.13
HDAC7-229ENST00000549883 PRAM1Q96QH2 718 aa14.25□□□□□ -0.13
HDAC7-229ENST00000549883 RGS17Q9UGC6 210 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-229ENST00000549883 TRAK1Q9UPV9 953 aa14.25□□□□□ -0.13
HDAC7-229ENST00000549883 JCADQ9P266 1359 aa14.24□□□□□ -0.13
HDAC7-229ENST00000549883 SHPRHQ149N8 1683 aa14.23□□□□□ -0.13
HDAC7-229ENST00000549883 LRP6O75581 1613 aa14.23□□□□□ -0.13
HDAC7-229ENST00000549883 NEUROD1Q13562 356 aa14.23□□□□□ -0.13
HDAC7-229ENST00000549883 SIRT1Q96EB6 747 aa14.23□□□□□ -0.13
HDAC7-229ENST00000549883 DLC1Q96QB1 1528 aa14.22□□□□□ -0.13
HDAC7-229ENST00000549883 ARHGEF28Q8N1W1 1705 aaKnown RBP14.22□□□□□ -0.13
HDAC7-229ENST00000549883 L3MBTL2Q969R5 705 aa14.22□□□□□ -0.13
HDAC7-229ENST00000549883 NBPF1Q3BBV0 1214 aa14.21□□□□□ -0.13
HDAC7-229ENST00000549883 ESCO1Q5FWF5 840 aa14.21□□□□□ -0.13
HDAC7-229ENST00000549883 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-229ENST00000549883 USP32Q8NFA0 1604 aa14.2□□□□□ -0.14
HDAC7-229ENST00000549883 XPCQ01831 940 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-229ENST00000549883 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-229ENST00000549883 KIAA1210Q9ULL0 1709 aa14.2□□□□□ -0.14
HDAC7-229ENST00000549883 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
HDAC7-229ENST00000549883 POGKQ9P215 609 aa14.19□□□□□ -0.14
HDAC7-229ENST00000549883 MINK1Q8N4C8 1332 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-229ENST00000549883 NUTM2BA6NNL0 878 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-229ENST00000549883 NUTM2EB1AL46 878 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-229ENST00000549883 NUTM2AQ8IVF1 878 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-229ENST00000549883 PNPLA6Q8IY17 1366 aa14.18□□□□□ -0.14
HDAC7-229ENST00000549883 SOS2Q07890 1332 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-229ENST00000549883 FOXO3O43524 673 aa14.17□□□□□ -0.14
HDAC7-229ENST00000549883 PXDNQ92626 1479 aa14.17□□□□□ -0.14
HDAC7-229ENST00000549883 ADGRB2O60241 1585 aa14.17□□□□□ -0.14
HDAC7-229ENST00000549883 POTEAQ6S8J7 498 aa14.16□□□□□ -0.14
HDAC7-229ENST00000549883 LRRC59Q96AG4 307 aaKnown RBP14.16□□□□□ -0.14
HDAC7-229ENST00000549883 SPATA31A6Q5VVP1 1343 aa14.15□□□□□ -0.14
HDAC7-229ENST00000549883 TRPM1Q7Z4N2 1603 aa14.15□□□□□ -0.14
HDAC7-229ENST00000549883 PRR36Q9H6K5 1346 aa14.15□□□□□ -0.15
HDAC7-229ENST00000549883 NBPF8Q3BBV2 869 aa14.14□□□□□ -0.15
HDAC7-229ENST00000549883 KIF1AQ12756 1690 aa14.14□□□□□ -0.15
HDAC7-229ENST00000549883 PMFBP1Q8TBY8 1022 aa14.12□□□□□ -0.15
HDAC7-229ENST00000549883 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
HDAC7-229ENST00000549883 NPHP3Q7Z494 1330 aa14.12□□□□□ -0.15
HDAC7-229ENST00000549883 WASLO00401 505 aaPredicted RBP14.11□□□□□ -0.15
HDAC7-229ENST00000549883 SOCS7O14512 581 aa14.11□□□□□ -0.15
HDAC7-229ENST00000549883 MEX3CQ5U5Q3 659 aaKnown RBP14.11□□□□□ -0.15
HDAC7-229ENST00000549883 COL22A1Q8NFW1 1626 aaPredicted RBP14.1□□□□□ -0.15
HDAC7-229ENST00000549883 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
HDAC7-229ENST00000549883 ANKARQ7Z5J8 1434 aa14.09□□□□□ -0.15
HDAC7-229ENST00000549883 ADAMTS2O95450 1211 aa14.09□□□□□ -0.15
HDAC7-229ENST00000549883 KRT28Q7Z3Y7 464 aa14.09□□□□□ -0.15
HDAC7-229ENST00000549883 QRICH2Q9H0J4 1663 aa14.09□□□□□ -0.15
HDAC7-229ENST00000549883 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.16
HDAC7-229ENST00000549883 TRPM3Q9HCF6 1732 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-229ENST00000549883 ATP7BP35670 1465 aa14.07□□□□□ -0.16
HDAC7-229ENST00000549883 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
HDAC7-229ENST00000549883 AFF2P51816 1311 aa14.07□□□□□ -0.16
HDAC7-229ENST00000549883 SPATA31A3Q5VYP0 1347 aa14.07□□□□□ -0.16
HDAC7-229ENST00000549883 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
HDAC7-229ENST00000549883 NUDT16Q96DE0 195 aaKnown RBP14.06□□□□□ -0.16
HDAC7-229ENST00000549883 C8orf37Q96NL8 207 aa14.06□□□□□ -0.16
HDAC7-229ENST00000549883 TOPAZ1Q8N9V7 1692 aa14.05□□□□□ -0.16
HDAC7-229ENST00000549883 MARF1Q9Y4F3 1742 aaKnown RBP14.05□□□□□ -0.16
HDAC7-229ENST00000549883 CABLES1Q8TDN4 633 aa14.05□□□□□ -0.16
HDAC7-229ENST00000549883 CENPJQ9HC77 1338 aaPredicted RBP14.05□□□□□ -0.16
HDAC7-229ENST00000549883 ROCK2O75116 1388 aaKnown RBP14.05□□□□□ -0.16
HDAC7-229ENST00000549883 TONSLQ96HA7 1378 aa14.05□□□□□ -0.16
HDAC7-229ENST00000549883 ITSN1Q15811 1721 aa14.04□□□□□ -0.16
HDAC7-229ENST00000549883 PSME1Q06323 249 aa14.04□□□□□ -0.16
HDAC7-229ENST00000549883 ABCA3Q99758 1704 aa14.04□□□□□ -0.16
HDAC7-229ENST00000549883 TNS3Q68CZ2 1445 aa14.03□□□□□ -0.16
HDAC7-229ENST00000549883 ALS2Q96Q42 1657 aa14.03□□□□□ -0.16
HDAC7-229ENST00000549883 EIF3AQ14152 1382 aaKnown RBP14.02□□□□□ -0.17
HDAC7-229ENST00000549883 NGLY1Q96IV0 654 aa14.02□□□□□ -0.17
HDAC7-229ENST00000549883 CABP2Q9NPB3 220 aa14.02□□□□□ -0.17
HDAC7-229ENST00000549883 SBNO1A3KN83 1393 aa14.01□□□□□ -0.17
HDAC7-229ENST00000549883 GPRASP1Q5JY77 1395 aa14.01□□□□□ -0.17
HDAC7-229ENST00000549883 ZNF772Q68DY9 489 aaPredicted RBP14.01□□□□□ -0.17
HDAC7-229ENST00000549883 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
HDAC7-229ENST00000549883 NGDNQ8NEJ9 315 aaKnown RBP14□□□□□ -0.17
HDAC7-229ENST00000549883 RALGAPBQ86X10 1494 aa13.99□□□□□ -0.17
HDAC7-229ENST00000549883 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
HDAC7-229ENST00000549883 CRYBG1Q9Y4K1 1723 aa13.98□□□□□ -0.17
HDAC7-229ENST00000549883 ACEP12821 1306 aa13.98□□□□□ -0.17
HDAC7-229ENST00000549883 QTRT2Q9H974 415 aaKnown RBP13.98□□□□□ -0.17
HDAC7-229ENST00000549883 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
HDAC7-229ENST00000549883 FNBP4Q8N3X1 1017 aaPredicted RBP13.97□□□□□ -0.17
HDAC7-229ENST00000549883 CARD11Q9BXL7 1154 aa13.97□□□□□ -0.17
HDAC7-229ENST00000549883 BCL9LQ86UU0 1499 aa13.97□□□□□ -0.17
HDAC7-229ENST00000549883 PPIP5K1Q6PFW1 1433 aa13.97□□□□□ -0.17
HDAC7-229ENST00000549883 POLR3AO14802 1390 aaPredicted RBP13.96□□□□□ -0.17
HDAC7-229ENST00000549883 PLEKHG3A1L390 1219 aa13.96□□□□□ -0.17
HDAC7-229ENST00000549883 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
HDAC7-229ENST00000549883 RXRBP28702 533 aa13.96□□□□□ -0.17
HDAC7-229ENST00000549883 NUTM2GQ5VZR2 741 aa13.96□□□□□ -0.17
HDAC7-229ENST00000549883 USP21Q9UK80 565 aa13.96□□□□□ -0.17
HDAC7-229ENST00000549883 ARHGEF10O15013 1369 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms