RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 MST1RQ04912 1400 aa15.32■□□□□ 0.04
CCDC38-207ENST00000549752 ASXL1Q8IXJ9 1541 aa15.32■□□□□ 0.04
CCDC38-207ENST00000549752 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
CCDC38-207ENST00000549752 MYOM2P54296 1465 aa15.31■□□□□ 0.04
CCDC38-207ENST00000549752 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
CCDC38-207ENST00000549752 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
CCDC38-207ENST00000549752 TECPR2O15040 1411 aa15.29■□□□□ 0.04
CCDC38-207ENST00000549752 SPATA31A6Q5VVP1 1343 aa15.29■□□□□ 0.04
CCDC38-207ENST00000549752 CDC42BPGQ6DT37 1551 aa15.28■□□□□ 0.04
CCDC38-207ENST00000549752 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
CCDC38-207ENST00000549752 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.04
CCDC38-207ENST00000549752 LRPPRCP42704 1394 aaKnown RBP15.27■□□□□ 0.04
CCDC38-207ENST00000549752 ABCC11Q96J66 1382 aa15.27■□□□□ 0.04
CCDC38-207ENST00000549752 C1orf167Q5SNV9 1468 aa15.26■□□□□ 0.03
CCDC38-207ENST00000549752 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
CCDC38-207ENST00000549752 C14orf93Q9H972 538 aaKnown RBP15.25■□□□□ 0.03
CCDC38-207ENST00000549752 YTHDC2Q9H6S0 1430 aaKnown RBP15.25■□□□□ 0.03
CCDC38-207ENST00000549752 LRRC59Q96AG4 307 aaKnown RBP15.24■□□□□ 0.03
CCDC38-207ENST00000549752 STK26Q9P289 416 aa15.24■□□□□ 0.03
CCDC38-207ENST00000549752 FMN2Q9NZ56 1722 aa15.23■□□□□ 0.03
CCDC38-207ENST00000549752 SIRT1Q96EB6 747 aa15.23■□□□□ 0.03
CCDC38-207ENST00000549752 RGPD8O14715 1765 aaPredicted RBP15.22■□□□□ 0.03
CCDC38-207ENST00000549752 MEX3CQ5U5Q3 659 aaKnown RBP15.22■□□□□ 0.03
CCDC38-207ENST00000549752 TMEM132EQ6IEE7 984 aa15.22■□□□□ 0.03
CCDC38-207ENST00000549752 KIF1AQ12756 1690 aa15.22■□□□□ 0.03
CCDC38-207ENST00000549752 DLC1Q96QB1 1528 aa15.2■□□□□ 0.02
CCDC38-207ENST00000549752 CFAP70Q5T0N1 1121 aa15.19■□□□□ 0.02
CCDC38-207ENST00000549752 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
CCDC38-207ENST00000549752 KIAA1210Q9ULL0 1709 aa15.19■□□□□ 0.02
CCDC38-207ENST00000549752 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
CCDC38-207ENST00000549752 DCAF11Q8TEB1 546 aa15.18■□□□□ 0.02
CCDC38-207ENST00000549752 RGS17Q9UGC6 210 aaPredicted RBP15.18■□□□□ 0.02
CCDC38-207ENST00000549752 NPHP3Q7Z494 1330 aa15.17■□□□□ 0.02
CCDC38-207ENST00000549752 LRP6O75581 1613 aa15.17■□□□□ 0.02
CCDC38-207ENST00000549752 ESCO1Q5FWF5 840 aa15.17■□□□□ 0.02
CCDC38-207ENST00000549752 ZNF772Q68DY9 489 aaPredicted RBP15.17■□□□□ 0.02
CCDC38-207ENST00000549752 KDM2AQ9Y2K7 1162 aa15.17■□□□□ 0.02
CCDC38-207ENST00000549752 ORAI2Q96SN7 254 aa15.16■□□□□ 0.02
CCDC38-207ENST00000549752 MARF1Q9Y4F3 1742 aaKnown RBP15.16■□□□□ 0.02
CCDC38-207ENST00000549752 COL22A1Q8NFW1 1626 aaPredicted RBP15.16■□□□□ 0.02
CCDC38-207ENST00000549752 SOS2Q07890 1332 aaPredicted RBP15.16■□□□□ 0.02
CCDC38-207ENST00000549752 ADGRB1O14514 1584 aa15.15■□□□□ 0.02
CCDC38-207ENST00000549752 POGKQ9P215 609 aa15.15■□□□□ 0.02
CCDC38-207ENST00000549752 ADGRB2O60241 1585 aa15.15■□□□□ 0.02
CCDC38-207ENST00000549752 PNPLA6Q8IY17 1366 aa15.14■□□□□ 0.01
CCDC38-207ENST00000549752 PLEKHH1Q9ULM0 1364 aa15.14■□□□□ 0.01
CCDC38-207ENST00000549752 NUTM2BA6NNL0 878 aaPredicted RBP15.14■□□□□ 0.01
CCDC38-207ENST00000549752 NUTM2EB1AL46 878 aaPredicted RBP15.14■□□□□ 0.01
CCDC38-207ENST00000549752 NUTM2AQ8IVF1 878 aaPredicted RBP15.14■□□□□ 0.01
CCDC38-207ENST00000549752 ARHGEF28Q8N1W1 1705 aaKnown RBP15.14■□□□□ 0.01
CCDC38-207ENST00000549752 DDX17Q92841 729 aaKnown RBP15.13■□□□□ 0.01
CCDC38-207ENST00000549752 PRAM1Q96QH2 718 aa15.13■□□□□ 0.01
CCDC38-207ENST00000549752 EIF3AQ14152 1382 aaKnown RBP15.12■□□□□ 0.01
CCDC38-207ENST00000549752 ITSN1Q15811 1721 aa15.12■□□□□ 0.01
CCDC38-207ENST00000549752 POTEAQ6S8J7 498 aa15.12■□□□□ 0.01
CCDC38-207ENST00000549752 PXDNQ92626 1479 aa15.11■□□□□ 0.01
CCDC38-207ENST00000549752 ANKARQ7Z5J8 1434 aa15.09■□□□□ 0.01
CCDC38-207ENST00000549752 NUTM2FA1L443 756 aa15.09■□□□□ 0.01
CCDC38-207ENST00000549752 FOXO3O43524 673 aa15.09■□□□□ 0.01
CCDC38-207ENST00000549752 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
CCDC38-207ENST00000549752 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0
CCDC38-207ENST00000549752 SLC24A1O60721 1099 aa15.07■□□□□ 0
CCDC38-207ENST00000549752 PSME1Q06323 249 aa15.07■□□□□ 0
CCDC38-207ENST00000549752 PHF8Q9UPP1 1060 aa15.07■□□□□ 0
CCDC38-207ENST00000549752 AFF2P51816 1311 aa15.07■□□□□ 0
CCDC38-207ENST00000549752 USP32Q8NFA0 1604 aa15.06■□□□□ 0
CCDC38-207ENST00000549752 C8orf37Q96NL8 207 aa15.06■□□□□ 0
CCDC38-207ENST00000549752 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
CCDC38-207ENST00000549752 RXRBP28702 533 aa15.05■□□□□ -0
CCDC38-207ENST00000549752 NGLY1Q96IV0 654 aa15.05■□□□□ -0
CCDC38-207ENST00000549752 CDK12Q9NYV4 1490 aaPredicted RBP15.05■□□□□ -0
CCDC38-207ENST00000549752 TULP4Q9NRJ4 1543 aa15.05■□□□□ -0
CCDC38-207ENST00000549752 ADAMTS2O95450 1211 aa15.04■□□□□ -0
CCDC38-207ENST00000549752 KRT28Q7Z3Y7 464 aa15.04■□□□□ -0
CCDC38-207ENST00000549752 MINK1Q8N4C8 1332 aaPredicted RBP15.03■□□□□ -0
CCDC38-207ENST00000549752 XPCQ01831 940 aaPredicted RBP15.03■□□□□ -0
CCDC38-207ENST00000549752 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.03■□□□□ -0
CCDC38-207ENST00000549752 SPATA31A3Q5VYP0 1347 aa15.02■□□□□ -0
CCDC38-207ENST00000549752 WASLO00401 505 aaPredicted RBP15.02■□□□□ -0
CCDC38-207ENST00000549752 ATF5Q9Y2D1 282 aaPredicted RBP15.02■□□□□ -0
CCDC38-207ENST00000549752 TNS3Q68CZ2 1445 aa15.01□□□□□ -0.01
CCDC38-207ENST00000549752 SBNO1A3KN83 1393 aa15.01□□□□□ -0.01
CCDC38-207ENST00000549752 ARHGEF10O15013 1369 aa15.01□□□□□ -0.01
CCDC38-207ENST00000549752 ABCA3Q99758 1704 aa15.01□□□□□ -0.01
CCDC38-207ENST00000549752 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
CCDC38-207ENST00000549752 TRPM3Q9HCF6 1732 aaPredicted RBP15□□□□□ -0.01
CCDC38-207ENST00000549752 GPRASP1Q5JY77 1395 aa15□□□□□ -0.01
CCDC38-207ENST00000549752 QRICH2Q9H0J4 1663 aa15□□□□□ -0.01
CCDC38-207ENST00000549752 TRPM1Q7Z4N2 1603 aa15□□□□□ -0.01
CCDC38-207ENST00000549752 RBM6P78332 1123 aaKnown RBP15□□□□□ -0.01
CCDC38-207ENST00000549752 QTRT2Q9H974 415 aaKnown RBP15□□□□□ -0.01
CCDC38-207ENST00000549752 NWD2Q9ULI1 1742 aa15□□□□□ -0.01
CCDC38-207ENST00000549752 HAP1P54257 671 aaPredicted RBP14.99□□□□□ -0.01
CCDC38-207ENST00000549752 FNBP4Q8N3X1 1017 aaPredicted RBP14.99□□□□□ -0.01
CCDC38-207ENST00000549752 USP21Q9UK80 565 aa14.99□□□□□ -0.01
CCDC38-207ENST00000549752 TRPC5Q9UL62 973 aaPredicted RBP14.99□□□□□ -0.01
CCDC38-207ENST00000549752 ALS2Q96Q42 1657 aa14.99□□□□□ -0.01
CCDC38-207ENST00000549752 TOPAZ1Q8N9V7 1692 aa14.98□□□□□ -0.01
CCDC38-207ENST00000549752 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
CCDC38-207ENST00000549752 PMFBP1Q8TBY8 1022 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms